ClaRNA

Doublet info:

Details

Nucleotide types: GG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1VQN:02649:02513

Extra

PDB:
ATOM 1 O3' G A2648 39.130 147.488 127.358 1.00 42.72 O
ATOM 2 P G A2649 37.803 148.378 127.497 1.00 44.88 P
ATOM 3 OP1 G A2649 37.635 149.055 126.191 1.00 43.98 O
ATOM 4 OP2 G A2649 37.872 149.183 128.734 1.00 44.22 O
ATOM 5 O5' G A2649 36.640 147.296 127.668 1.00 46.09 O
ATOM 6 C5' G A2649 36.377 146.334 126.628 1.00 43.25 C
ATOM 7 C4' G A2649 35.570 145.175 127.163 1.00 44.17 C
ATOM 8 O4' G A2649 36.330 144.441 128.156 1.00 42.73 O
ATOM 9 C3' G A2649 34.282 145.522 127.889 1.00 44.54 C
ATOM 10 O3' G A2649 33.240 145.813 126.982 1.00 47.68 O
ATOM 11 C2' G A2649 34.019 144.254 128.689 1.00 43.08 C
ATOM 12 O2' G A2649 33.473 143.175 127.957 1.00 40.27 O
ATOM 13 C1' G A2649 35.436 143.894 129.120 1.00 43.16 C
ATOM 14 N9 G A2649 35.716 144.522 130.400 1.00 42.02 N
ATOM 15 C8 G A2649 36.407 145.686 130.610 1.00 43.28 C
ATOM 16 N7 G A2649 36.506 145.997 131.868 1.00 45.15 N
ATOM 17 C5 G A2649 35.835 144.978 132.523 1.00 42.35 C
ATOM 18 C6 G A2649 35.631 144.775 133.885 1.00 41.24 C
ATOM 19 O6 G A2649 36.022 145.471 134.820 1.00 46.48 O
ATOM 20 N1 G A2649 34.900 143.620 134.129 1.00 41.31 N
ATOM 21 C2 G A2649 34.442 142.763 133.163 1.00 41.06 C
ATOM 22 N2 G A2649 33.770 141.679 133.591 1.00 39.52 N
ATOM 23 N3 G A2649 34.635 142.947 131.873 1.00 40.18 N
ATOM 24 C4 G A2649 35.336 144.067 131.629 1.00 39.33 C
ATOM 25 P A A2650 31.969 146.669 127.467 1.00 51.20 P
ATOM 26 OP1 A A2650 32.357 148.103 127.610 1.00 51.19 O
ATOM 27 OP2 A A2650 31.336 145.957 128.618 1.00 48.83 O
ATOM 28 O5' A A2650 31.015 146.544 126.205 1.00 49.84 O
TER

ATOM 1 O3' U B2512 28.735 144.428 139.680 1.00 47.08 O
ATOM 2 P G B2513 29.881 143.366 140.048 1.00 48.08 P
ATOM 3 OP1 G B2513 29.363 142.478 141.120 1.00 48.17 O
ATOM 4 OP2 G B2513 31.150 144.105 140.258 1.00 48.27 O
ATOM 5 O5' G B2513 30.028 142.484 138.737 1.00 48.69 O
ATOM 6 C5' G B2513 28.949 141.656 138.275 1.00 47.97 C
ATOM 7 C4' G B2513 29.389 140.886 137.057 1.00 48.58 C
ATOM 8 O4' G B2513 29.542 141.802 135.932 1.00 47.65 O
ATOM 9 C3' G B2513 30.739 140.203 137.229 1.00 49.24 C
ATOM 10 O3' G B2513 30.768 138.999 136.499 1.00 52.32 O
ATOM 11 C2' G B2513 31.702 141.212 136.621 1.00 47.18 C
ATOM 12 O2' G B2513 32.909 140.640 136.176 1.00 45.84 O
ATOM 13 C1' G B2513 30.872 141.751 135.460 1.00 46.72 C
ATOM 14 N9 G B2513 31.269 143.085 135.022 1.00 46.30 N
ATOM 15 C8 G B2513 31.784 144.100 135.795 1.00 45.25 C
ATOM 16 N7 G B2513 32.089 145.166 135.104 1.00 45.61 N
ATOM 17 C5 G B2513 31.746 144.840 133.798 1.00 46.04 C
ATOM 18 C6 G B2513 31.861 145.593 132.605 1.00 46.77 C
ATOM 19 O6 G B2513 32.314 146.732 132.457 1.00 48.50 O
ATOM 20 N1 G B2513 31.383 144.888 131.503 1.00 44.59 N
ATOM 21 C2 G B2513 30.867 143.621 131.543 1.00 44.06 C
ATOM 22 N2 G B2513 30.445 143.121 130.374 1.00 42.04 N
ATOM 23 N3 G B2513 30.767 142.898 132.650 1.00 45.54 N
ATOM 24 C4 G B2513 31.223 143.567 133.732 1.00 45.78 C
ATOM 25 P A B2514 31.765 137.827 136.950 1.00 56.52 P
ATOM 26 OP1 A B2514 31.415 137.422 138.341 1.00 57.39 O
ATOM 27 OP2 A B2514 33.149 138.253 136.642 1.00 54.76 O
ATOM 28 O5' A B2514 31.362 136.633 135.978 1.00 55.07 O
TER

Atoms:
OP1: (37.635,149.055,126.191)
OP2: (37.872,149.183,128.734)
C3': (34.282,145.522,127.889)
C1': (35.436,143.894,129.120)
C5': (36.377,146.334,126.628)
O6: (36.022,145.471,134.820)
O4': (36.330,144.441,128.156)
C8: (36.407,145.686,130.610)
C2: (34.442,142.763,133.163)
C6: (35.631,144.775,133.885)
C5: (35.835,144.978,132.523)
C4: (35.336,144.067,131.629)
P: (37.803,148.378,127.497)
C4': (35.570,145.175,127.163)
C2': (34.019,144.254,128.689)
O2': (33.473,143.175,127.957)
N1: (34.900,143.620,134.129)
N2: (33.770,141.679,133.591)
N3: (34.635,142.947,131.873)
N7: (36.506,145.997,131.868)
N9: (35.716,144.522,130.400)
O5': (36.640,147.296,127.668)
O3': (33.240,145.813,126.982)
OP1: (29.363,142.478,141.120)
OP2: (31.150,144.105,140.258)
C3': (30.739,140.203,137.229)
C1': (30.872,141.751,135.460)
C5': (28.949,141.656,138.275)
O6: (32.314,146.732,132.457)
O4': (29.542,141.802,135.932)
C8: (31.784,144.100,135.795)
C2: (30.867,143.621,131.543)
C6: (31.861,145.593,132.605)
C5: (31.746,144.840,133.798)
C4: (31.223,143.567,133.732)
P: (29.881,143.366,140.048)
C4': (29.389,140.886,137.057)
C2': (31.702,141.212,136.621)
O2': (32.909,140.640,136.176)
N1: (31.383,144.888,131.503)
N2: (30.445,143.121,130.374)
N3: (30.767,142.898,132.650)
N7: (32.089,145.166,135.104)
N9: (31.269,143.085,135.022)
O5': (30.028,142.484,138.737)
O3': (30.768,138.999,136.499)
Image (generated by PyMOL):
PyMOL image
show in jmol