Doublet info:
Details
Nucleotide types:
GG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VQO:0234:0252
Extra
PDB:
ATOM 1 O3' C A 233 92.291 111.715 -9.913 1.00 64.95 O
ATOM 2 P G A 234 93.761 112.352 -9.964 1.00 66.30 P
ATOM 3 OP1 G A 234 94.051 112.777 -11.368 1.00 68.53 O
ATOM 4 OP2 G A 234 94.682 111.406 -9.277 1.00 63.55 O
ATOM 5 O5' G A 234 93.601 113.663 -9.082 1.00 64.11 O
ATOM 6 C5' G A 234 92.483 114.540 -9.292 1.00 63.43 C
ATOM 7 C4' G A 234 92.557 115.705 -8.345 1.00 63.43 C
ATOM 8 O4' G A 234 92.319 115.228 -6.992 1.00 63.95 O
ATOM 9 C3' G A 234 93.901 116.424 -8.321 1.00 62.93 C
ATOM 10 O3' G A 234 93.706 117.819 -8.176 1.00 63.44 O
ATOM 11 C2' G A 234 94.588 115.822 -7.101 1.00 62.76 C
ATOM 12 O2' G A 234 95.540 116.675 -6.497 1.00 62.33 O
ATOM 13 C1' G A 234 93.407 115.581 -6.166 1.00 63.11 C
ATOM 14 N9 G A 234 93.660 114.486 -5.234 1.00 63.39 N
ATOM 15 C8 G A 234 94.230 113.270 -5.524 1.00 63.67 C
ATOM 16 N7 G A 234 94.411 112.525 -4.470 1.00 64.69 N
ATOM 17 C5 G A 234 93.912 113.287 -3.422 1.00 64.09 C
ATOM 18 C6 G A 234 93.856 113.009 -2.033 1.00 63.72 C
ATOM 19 O6 G A 234 94.264 112.011 -1.430 1.00 63.25 O
ATOM 20 N1 G A 234 93.260 114.048 -1.329 1.00 63.82 N
ATOM 21 C2 G A 234 92.786 115.209 -1.886 1.00 64.24 C
ATOM 22 N2 G A 234 92.236 116.087 -1.036 1.00 65.21 N
ATOM 23 N3 G A 234 92.846 115.488 -3.177 1.00 63.28 N
ATOM 24 C4 G A 234 93.420 114.489 -3.881 1.00 63.40 C
ATOM 25 P A A 235 94.196 118.803 -9.346 1.00 62.46 P
ATOM 26 OP1 A A 235 93.709 118.241 -10.632 1.00 64.15 O
ATOM 27 OP2 A A 235 95.653 119.026 -9.146 1.00 61.35 O
ATOM 28 O5' A A 235 93.401 120.155 -9.072 1.00 61.35 O
TER
ATOM 1 O3' U B 251 96.465 118.548 6.534 1.00 46.67 O
ATOM 2 P G B 252 95.159 117.832 5.940 1.00 43.75 P
ATOM 3 OP1 G B 252 93.998 118.201 6.784 1.00 45.60 O
ATOM 4 OP2 G B 252 95.465 116.405 5.700 1.00 43.39 O
ATOM 5 O5' G B 252 94.989 118.522 4.521 1.00 45.97 O
ATOM 6 C5' G B 252 94.450 119.838 4.391 1.00 45.22 C
ATOM 7 C4' G B 252 93.415 119.838 3.299 1.00 47.73 C
ATOM 8 O4' G B 252 94.060 119.450 2.051 1.00 47.52 O
ATOM 9 C3' G B 252 92.288 118.841 3.523 1.00 48.70 C
ATOM 10 O3' G B 252 91.063 119.336 3.021 1.00 50.19 O
ATOM 11 C2' G B 252 92.754 117.600 2.768 1.00 48.98 C
ATOM 12 O2' G B 252 91.665 116.822 2.301 1.00 47.10 O
ATOM 13 C1' G B 252 93.564 118.198 1.613 1.00 49.11 C
ATOM 14 N9 G B 252 94.713 117.363 1.262 1.00 49.74 N
ATOM 15 C8 G B 252 95.508 116.652 2.132 1.00 50.62 C
ATOM 16 N7 G B 252 96.439 115.961 1.533 1.00 49.51 N
ATOM 17 C5 G B 252 96.261 116.236 0.184 1.00 50.71 C
ATOM 18 C6 G B 252 96.977 115.761 -0.954 1.00 52.22 C
ATOM 19 O6 G B 252 97.935 114.960 -0.994 1.00 52.26 O
ATOM 20 N1 G B 252 96.478 116.306 -2.133 1.00 50.35 N
ATOM 21 C2 G B 252 95.427 117.189 -2.216 1.00 51.76 C
ATOM 22 N2 G B 252 95.108 117.612 -3.454 1.00 49.77 N
ATOM 23 N3 G B 252 94.742 117.629 -1.166 1.00 51.44 N
ATOM 24 C4 G B 252 95.210 117.114 -0.004 1.00 51.29 C
ATOM 25 P U B 253 89.733 119.180 3.906 1.00 53.48 P
ATOM 26 OP1 U B 253 90.068 119.715 5.256 1.00 51.22 O
ATOM 27 OP2 U B 253 89.234 117.784 3.778 1.00 52.61 O
ATOM 28 O5' U B 253 88.689 120.148 3.188 1.00 50.40 O
TER
ATOM 2 P G A 234 93.761 112.352 -9.964 1.00 66.30 P
ATOM 3 OP1 G A 234 94.051 112.777 -11.368 1.00 68.53 O
ATOM 4 OP2 G A 234 94.682 111.406 -9.277 1.00 63.55 O
ATOM 5 O5' G A 234 93.601 113.663 -9.082 1.00 64.11 O
ATOM 6 C5' G A 234 92.483 114.540 -9.292 1.00 63.43 C
ATOM 7 C4' G A 234 92.557 115.705 -8.345 1.00 63.43 C
ATOM 8 O4' G A 234 92.319 115.228 -6.992 1.00 63.95 O
ATOM 9 C3' G A 234 93.901 116.424 -8.321 1.00 62.93 C
ATOM 10 O3' G A 234 93.706 117.819 -8.176 1.00 63.44 O
ATOM 11 C2' G A 234 94.588 115.822 -7.101 1.00 62.76 C
ATOM 12 O2' G A 234 95.540 116.675 -6.497 1.00 62.33 O
ATOM 13 C1' G A 234 93.407 115.581 -6.166 1.00 63.11 C
ATOM 14 N9 G A 234 93.660 114.486 -5.234 1.00 63.39 N
ATOM 15 C8 G A 234 94.230 113.270 -5.524 1.00 63.67 C
ATOM 16 N7 G A 234 94.411 112.525 -4.470 1.00 64.69 N
ATOM 17 C5 G A 234 93.912 113.287 -3.422 1.00 64.09 C
ATOM 18 C6 G A 234 93.856 113.009 -2.033 1.00 63.72 C
ATOM 19 O6 G A 234 94.264 112.011 -1.430 1.00 63.25 O
ATOM 20 N1 G A 234 93.260 114.048 -1.329 1.00 63.82 N
ATOM 21 C2 G A 234 92.786 115.209 -1.886 1.00 64.24 C
ATOM 22 N2 G A 234 92.236 116.087 -1.036 1.00 65.21 N
ATOM 23 N3 G A 234 92.846 115.488 -3.177 1.00 63.28 N
ATOM 24 C4 G A 234 93.420 114.489 -3.881 1.00 63.40 C
ATOM 25 P A A 235 94.196 118.803 -9.346 1.00 62.46 P
ATOM 26 OP1 A A 235 93.709 118.241 -10.632 1.00 64.15 O
ATOM 27 OP2 A A 235 95.653 119.026 -9.146 1.00 61.35 O
ATOM 28 O5' A A 235 93.401 120.155 -9.072 1.00 61.35 O
TER
ATOM 1 O3' U B 251 96.465 118.548 6.534 1.00 46.67 O
ATOM 2 P G B 252 95.159 117.832 5.940 1.00 43.75 P
ATOM 3 OP1 G B 252 93.998 118.201 6.784 1.00 45.60 O
ATOM 4 OP2 G B 252 95.465 116.405 5.700 1.00 43.39 O
ATOM 5 O5' G B 252 94.989 118.522 4.521 1.00 45.97 O
ATOM 6 C5' G B 252 94.450 119.838 4.391 1.00 45.22 C
ATOM 7 C4' G B 252 93.415 119.838 3.299 1.00 47.73 C
ATOM 8 O4' G B 252 94.060 119.450 2.051 1.00 47.52 O
ATOM 9 C3' G B 252 92.288 118.841 3.523 1.00 48.70 C
ATOM 10 O3' G B 252 91.063 119.336 3.021 1.00 50.19 O
ATOM 11 C2' G B 252 92.754 117.600 2.768 1.00 48.98 C
ATOM 12 O2' G B 252 91.665 116.822 2.301 1.00 47.10 O
ATOM 13 C1' G B 252 93.564 118.198 1.613 1.00 49.11 C
ATOM 14 N9 G B 252 94.713 117.363 1.262 1.00 49.74 N
ATOM 15 C8 G B 252 95.508 116.652 2.132 1.00 50.62 C
ATOM 16 N7 G B 252 96.439 115.961 1.533 1.00 49.51 N
ATOM 17 C5 G B 252 96.261 116.236 0.184 1.00 50.71 C
ATOM 18 C6 G B 252 96.977 115.761 -0.954 1.00 52.22 C
ATOM 19 O6 G B 252 97.935 114.960 -0.994 1.00 52.26 O
ATOM 20 N1 G B 252 96.478 116.306 -2.133 1.00 50.35 N
ATOM 21 C2 G B 252 95.427 117.189 -2.216 1.00 51.76 C
ATOM 22 N2 G B 252 95.108 117.612 -3.454 1.00 49.77 N
ATOM 23 N3 G B 252 94.742 117.629 -1.166 1.00 51.44 N
ATOM 24 C4 G B 252 95.210 117.114 -0.004 1.00 51.29 C
ATOM 25 P U B 253 89.733 119.180 3.906 1.00 53.48 P
ATOM 26 OP1 U B 253 90.068 119.715 5.256 1.00 51.22 O
ATOM 27 OP2 U B 253 89.234 117.784 3.778 1.00 52.61 O
ATOM 28 O5' U B 253 88.689 120.148 3.188 1.00 50.40 O
TER
Atoms:
OP1: (94.051,112.777,-11.368)
OP2: (94.682,111.406,-9.277)
C3': (93.901,116.424,-8.321)
C1': (93.407,115.581,-6.166)
C5': (92.483,114.540,-9.292)
O6: (94.264,112.011,-1.430)
O4': (92.319,115.228,-6.992)
C8: (94.230,113.270,-5.524)
C2: (92.786,115.209,-1.886)
C6: (93.856,113.009,-2.033)
C5: (93.912,113.287,-3.422)
C4: (93.420,114.489,-3.881)
P: (93.761,112.352,-9.964)
C4': (92.557,115.705,-8.345)
C2': (94.588,115.822,-7.101)
O2': (95.540,116.675,-6.497)
N1: (93.260,114.048,-1.329)
N2: (92.236,116.087,-1.036)
N3: (92.846,115.488,-3.177)
N7: (94.411,112.525,-4.470)
N9: (93.660,114.486,-5.234)
O5': (93.601,113.663,-9.082)
O3': (93.706,117.819,-8.176)
OP2: (94.682,111.406,-9.277)
C3': (93.901,116.424,-8.321)
C1': (93.407,115.581,-6.166)
C5': (92.483,114.540,-9.292)
O6: (94.264,112.011,-1.430)
O4': (92.319,115.228,-6.992)
C8: (94.230,113.270,-5.524)
C2: (92.786,115.209,-1.886)
C6: (93.856,113.009,-2.033)
C5: (93.912,113.287,-3.422)
C4: (93.420,114.489,-3.881)
P: (93.761,112.352,-9.964)
C4': (92.557,115.705,-8.345)
C2': (94.588,115.822,-7.101)
O2': (95.540,116.675,-6.497)
N1: (93.260,114.048,-1.329)
N2: (92.236,116.087,-1.036)
N3: (92.846,115.488,-3.177)
N7: (94.411,112.525,-4.470)
N9: (93.660,114.486,-5.234)
O5': (93.601,113.663,-9.082)
O3': (93.706,117.819,-8.176)
OP1: (93.998,118.201,6.784)
OP2: (95.465,116.405,5.700)
C3': (92.288,118.841,3.523)
C1': (93.564,118.198,1.613)
C5': (94.450,119.838,4.391)
O6: (97.935,114.960,-0.994)
O4': (94.060,119.450,2.051)
C8: (95.508,116.652,2.132)
C2: (95.427,117.189,-2.216)
C6: (96.977,115.761,-0.954)
C5: (96.261,116.236,0.184)
C4: (95.210,117.114,-0.004)
P: (95.159,117.832,5.940)
C4': (93.415,119.838,3.299)
C2': (92.754,117.600,2.768)
O2': (91.665,116.822,2.301)
N1: (96.478,116.306,-2.133)
N2: (95.108,117.612,-3.454)
N3: (94.742,117.629,-1.166)
N7: (96.439,115.961,1.533)
N9: (94.713,117.363,1.262)
O5': (94.989,118.522,4.521)
O3': (91.063,119.336,3.021)
OP2: (95.465,116.405,5.700)
C3': (92.288,118.841,3.523)
C1': (93.564,118.198,1.613)
C5': (94.450,119.838,4.391)
O6: (97.935,114.960,-0.994)
O4': (94.060,119.450,2.051)
C8: (95.508,116.652,2.132)
C2: (95.427,117.189,-2.216)
C6: (96.977,115.761,-0.954)
C5: (96.261,116.236,0.184)
C4: (95.210,117.114,-0.004)
P: (95.159,117.832,5.940)
C4': (93.415,119.838,3.299)
C2': (92.754,117.600,2.768)
O2': (91.665,116.822,2.301)
N1: (96.478,116.306,-2.133)
N2: (95.108,117.612,-3.454)
N3: (94.742,117.629,-1.166)
N7: (96.439,115.961,1.533)
N9: (94.713,117.363,1.262)
O5': (94.989,118.522,4.521)
O3': (91.063,119.336,3.021)
Image (generated by PyMOL):