Doublet info:
Details
Nucleotide types:
GG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YHQ:0234:0252
Extra
PDB:
ATOM 1 O3' C A 233 92.674 111.399 -9.663 1.00 49.72 O
ATOM 2 P G A 234 94.142 112.042 -9.708 1.00 52.04 P
ATOM 3 OP1 G A 234 94.444 112.415 -11.119 1.00 54.39 O
ATOM 4 OP2 G A 234 95.062 111.128 -8.978 1.00 48.94 O
ATOM 5 O5' G A 234 93.952 113.384 -8.876 1.00 50.00 O
ATOM 6 C5' G A 234 92.803 114.220 -9.106 1.00 50.37 C
ATOM 7 C4' G A 234 92.825 115.398 -8.172 1.00 51.57 C
ATOM 8 O4' G A 234 92.586 114.926 -6.816 1.00 53.18 O
ATOM 9 C3' G A 234 94.149 116.151 -8.143 1.00 51.72 C
ATOM 10 O3' G A 234 93.927 117.543 -8.003 1.00 52.82 O
ATOM 11 C2' G A 234 94.845 115.565 -6.921 1.00 51.67 C
ATOM 12 O2' G A 234 95.786 116.433 -6.324 1.00 51.48 O
ATOM 13 C1' G A 234 93.668 115.292 -5.987 1.00 51.42 C
ATOM 14 N9 G A 234 93.950 114.191 -5.071 1.00 51.30 N
ATOM 15 C8 G A 234 94.547 112.993 -5.382 1.00 51.34 C
ATOM 16 N7 G A 234 94.778 112.249 -4.337 1.00 52.57 N
ATOM 17 C5 G A 234 94.284 112.988 -3.272 1.00 51.72 C
ATOM 18 C6 G A 234 94.288 112.707 -1.881 1.00 51.88 C
ATOM 19 O6 G A 234 94.773 111.730 -1.294 1.00 49.81 O
ATOM 20 N1 G A 234 93.663 113.717 -1.155 1.00 51.51 N
ATOM 21 C2 G A 234 93.118 114.858 -1.696 1.00 51.17 C
ATOM 22 N2 G A 234 92.538 115.706 -0.833 1.00 50.16 N
ATOM 23 N3 G A 234 93.137 115.144 -2.987 1.00 51.16 N
ATOM 24 C4 G A 234 93.732 114.172 -3.712 1.00 51.40 C
ATOM 25 P A A 235 94.479 118.543 -9.132 1.00 52.81 P
ATOM 26 OP1 A A 235 94.033 118.008 -10.446 1.00 51.67 O
ATOM 27 OP2 A A 235 95.929 118.757 -8.878 1.00 50.28 O
ATOM 28 O5' A A 235 93.691 119.896 -8.855 1.00 50.53 O
TER
ATOM 1 O3' U B 251 96.766 118.248 6.747 1.00 35.02 O
ATOM 2 P G B 252 95.491 117.484 6.150 1.00 35.25 P
ATOM 3 OP1 G B 252 94.305 117.816 6.971 1.00 37.23 O
ATOM 4 OP2 G B 252 95.862 116.069 5.923 1.00 34.61 O
ATOM 5 O5' G B 252 95.304 118.151 4.725 1.00 35.27 O
ATOM 6 C5' G B 252 94.840 119.492 4.596 1.00 35.67 C
ATOM 7 C4' G B 252 93.809 119.545 3.512 1.00 38.09 C
ATOM 8 O4' G B 252 94.451 119.171 2.262 1.00 39.02 O
ATOM 9 C3' G B 252 92.671 118.557 3.720 1.00 38.68 C
ATOM 10 O3' G B 252 91.452 119.074 3.239 1.00 39.37 O
ATOM 11 C2' G B 252 93.123 117.321 2.949 1.00 39.69 C
ATOM 12 O2' G B 252 92.043 116.546 2.459 1.00 40.04 O
ATOM 13 C1' G B 252 93.957 117.922 1.813 1.00 38.76 C
ATOM 14 N9 G B 252 95.105 117.078 1.479 1.00 37.78 N
ATOM 15 C8 G B 252 95.881 116.351 2.354 1.00 37.65 C
ATOM 16 N7 G B 252 96.796 115.636 1.759 1.00 36.65 N
ATOM 17 C5 G B 252 96.628 115.914 0.409 1.00 38.58 C
ATOM 18 C6 G B 252 97.322 115.411 -0.731 1.00 39.38 C
ATOM 19 O6 G B 252 98.244 114.574 -0.771 1.00 39.61 O
ATOM 20 N1 G B 252 96.841 115.975 -1.910 1.00 37.75 N
ATOM 21 C2 G B 252 95.823 116.896 -1.989 1.00 38.95 C
ATOM 22 N2 G B 252 95.512 117.332 -3.222 1.00 37.06 N
ATOM 23 N3 G B 252 95.158 117.357 -0.940 1.00 38.10 N
ATOM 24 C4 G B 252 95.607 116.826 0.219 1.00 38.19 C
ATOM 25 P U B 253 90.132 118.904 4.130 1.00 39.44 P
ATOM 26 OP1 U B 253 90.450 119.430 5.481 1.00 39.01 O
ATOM 27 OP2 U B 253 89.671 117.503 3.977 1.00 39.19 O
ATOM 28 O5' U B 253 89.071 119.864 3.430 1.00 39.07 O
TER
ATOM 2 P G A 234 94.142 112.042 -9.708 1.00 52.04 P
ATOM 3 OP1 G A 234 94.444 112.415 -11.119 1.00 54.39 O
ATOM 4 OP2 G A 234 95.062 111.128 -8.978 1.00 48.94 O
ATOM 5 O5' G A 234 93.952 113.384 -8.876 1.00 50.00 O
ATOM 6 C5' G A 234 92.803 114.220 -9.106 1.00 50.37 C
ATOM 7 C4' G A 234 92.825 115.398 -8.172 1.00 51.57 C
ATOM 8 O4' G A 234 92.586 114.926 -6.816 1.00 53.18 O
ATOM 9 C3' G A 234 94.149 116.151 -8.143 1.00 51.72 C
ATOM 10 O3' G A 234 93.927 117.543 -8.003 1.00 52.82 O
ATOM 11 C2' G A 234 94.845 115.565 -6.921 1.00 51.67 C
ATOM 12 O2' G A 234 95.786 116.433 -6.324 1.00 51.48 O
ATOM 13 C1' G A 234 93.668 115.292 -5.987 1.00 51.42 C
ATOM 14 N9 G A 234 93.950 114.191 -5.071 1.00 51.30 N
ATOM 15 C8 G A 234 94.547 112.993 -5.382 1.00 51.34 C
ATOM 16 N7 G A 234 94.778 112.249 -4.337 1.00 52.57 N
ATOM 17 C5 G A 234 94.284 112.988 -3.272 1.00 51.72 C
ATOM 18 C6 G A 234 94.288 112.707 -1.881 1.00 51.88 C
ATOM 19 O6 G A 234 94.773 111.730 -1.294 1.00 49.81 O
ATOM 20 N1 G A 234 93.663 113.717 -1.155 1.00 51.51 N
ATOM 21 C2 G A 234 93.118 114.858 -1.696 1.00 51.17 C
ATOM 22 N2 G A 234 92.538 115.706 -0.833 1.00 50.16 N
ATOM 23 N3 G A 234 93.137 115.144 -2.987 1.00 51.16 N
ATOM 24 C4 G A 234 93.732 114.172 -3.712 1.00 51.40 C
ATOM 25 P A A 235 94.479 118.543 -9.132 1.00 52.81 P
ATOM 26 OP1 A A 235 94.033 118.008 -10.446 1.00 51.67 O
ATOM 27 OP2 A A 235 95.929 118.757 -8.878 1.00 50.28 O
ATOM 28 O5' A A 235 93.691 119.896 -8.855 1.00 50.53 O
TER
ATOM 1 O3' U B 251 96.766 118.248 6.747 1.00 35.02 O
ATOM 2 P G B 252 95.491 117.484 6.150 1.00 35.25 P
ATOM 3 OP1 G B 252 94.305 117.816 6.971 1.00 37.23 O
ATOM 4 OP2 G B 252 95.862 116.069 5.923 1.00 34.61 O
ATOM 5 O5' G B 252 95.304 118.151 4.725 1.00 35.27 O
ATOM 6 C5' G B 252 94.840 119.492 4.596 1.00 35.67 C
ATOM 7 C4' G B 252 93.809 119.545 3.512 1.00 38.09 C
ATOM 8 O4' G B 252 94.451 119.171 2.262 1.00 39.02 O
ATOM 9 C3' G B 252 92.671 118.557 3.720 1.00 38.68 C
ATOM 10 O3' G B 252 91.452 119.074 3.239 1.00 39.37 O
ATOM 11 C2' G B 252 93.123 117.321 2.949 1.00 39.69 C
ATOM 12 O2' G B 252 92.043 116.546 2.459 1.00 40.04 O
ATOM 13 C1' G B 252 93.957 117.922 1.813 1.00 38.76 C
ATOM 14 N9 G B 252 95.105 117.078 1.479 1.00 37.78 N
ATOM 15 C8 G B 252 95.881 116.351 2.354 1.00 37.65 C
ATOM 16 N7 G B 252 96.796 115.636 1.759 1.00 36.65 N
ATOM 17 C5 G B 252 96.628 115.914 0.409 1.00 38.58 C
ATOM 18 C6 G B 252 97.322 115.411 -0.731 1.00 39.38 C
ATOM 19 O6 G B 252 98.244 114.574 -0.771 1.00 39.61 O
ATOM 20 N1 G B 252 96.841 115.975 -1.910 1.00 37.75 N
ATOM 21 C2 G B 252 95.823 116.896 -1.989 1.00 38.95 C
ATOM 22 N2 G B 252 95.512 117.332 -3.222 1.00 37.06 N
ATOM 23 N3 G B 252 95.158 117.357 -0.940 1.00 38.10 N
ATOM 24 C4 G B 252 95.607 116.826 0.219 1.00 38.19 C
ATOM 25 P U B 253 90.132 118.904 4.130 1.00 39.44 P
ATOM 26 OP1 U B 253 90.450 119.430 5.481 1.00 39.01 O
ATOM 27 OP2 U B 253 89.671 117.503 3.977 1.00 39.19 O
ATOM 28 O5' U B 253 89.071 119.864 3.430 1.00 39.07 O
TER
Atoms:
OP1: (94.444,112.415,-11.119)
OP2: (95.062,111.128,-8.978)
C3': (94.149,116.151,-8.143)
C1': (93.668,115.292,-5.987)
C5': (92.803,114.220,-9.106)
O6: (94.773,111.730,-1.294)
O4': (92.586,114.926,-6.816)
C8: (94.547,112.993,-5.382)
C2: (93.118,114.858,-1.696)
C6: (94.288,112.707,-1.881)
C5: (94.284,112.988,-3.272)
C4: (93.732,114.172,-3.712)
P: (94.142,112.042,-9.708)
C4': (92.825,115.398,-8.172)
C2': (94.845,115.565,-6.921)
O2': (95.786,116.433,-6.324)
N1: (93.663,113.717,-1.155)
N2: (92.538,115.706,-0.833)
N3: (93.137,115.144,-2.987)
N7: (94.778,112.249,-4.337)
N9: (93.950,114.191,-5.071)
O5': (93.952,113.384,-8.876)
O3': (93.927,117.543,-8.003)
OP2: (95.062,111.128,-8.978)
C3': (94.149,116.151,-8.143)
C1': (93.668,115.292,-5.987)
C5': (92.803,114.220,-9.106)
O6: (94.773,111.730,-1.294)
O4': (92.586,114.926,-6.816)
C8: (94.547,112.993,-5.382)
C2: (93.118,114.858,-1.696)
C6: (94.288,112.707,-1.881)
C5: (94.284,112.988,-3.272)
C4: (93.732,114.172,-3.712)
P: (94.142,112.042,-9.708)
C4': (92.825,115.398,-8.172)
C2': (94.845,115.565,-6.921)
O2': (95.786,116.433,-6.324)
N1: (93.663,113.717,-1.155)
N2: (92.538,115.706,-0.833)
N3: (93.137,115.144,-2.987)
N7: (94.778,112.249,-4.337)
N9: (93.950,114.191,-5.071)
O5': (93.952,113.384,-8.876)
O3': (93.927,117.543,-8.003)
OP1: (94.305,117.816,6.971)
OP2: (95.862,116.069,5.923)
C3': (92.671,118.557,3.720)
C1': (93.957,117.922,1.813)
C5': (94.840,119.492,4.596)
O6: (98.244,114.574,-0.771)
O4': (94.451,119.171,2.262)
C8: (95.881,116.351,2.354)
C2: (95.823,116.896,-1.989)
C6: (97.322,115.411,-0.731)
C5: (96.628,115.914,0.409)
C4: (95.607,116.826,0.219)
P: (95.491,117.484,6.150)
C4': (93.809,119.545,3.512)
C2': (93.123,117.321,2.949)
O2': (92.043,116.546,2.459)
N1: (96.841,115.975,-1.910)
N2: (95.512,117.332,-3.222)
N3: (95.158,117.357,-0.940)
N7: (96.796,115.636,1.759)
N9: (95.105,117.078,1.479)
O5': (95.304,118.151,4.725)
O3': (91.452,119.074,3.239)
OP2: (95.862,116.069,5.923)
C3': (92.671,118.557,3.720)
C1': (93.957,117.922,1.813)
C5': (94.840,119.492,4.596)
O6: (98.244,114.574,-0.771)
O4': (94.451,119.171,2.262)
C8: (95.881,116.351,2.354)
C2: (95.823,116.896,-1.989)
C6: (97.322,115.411,-0.731)
C5: (96.628,115.914,0.409)
C4: (95.607,116.826,0.219)
P: (95.491,117.484,6.150)
C4': (93.809,119.545,3.512)
C2': (93.123,117.321,2.949)
O2': (92.043,116.546,2.459)
N1: (96.841,115.975,-1.910)
N2: (95.512,117.332,-3.222)
N3: (95.158,117.357,-0.940)
N7: (96.796,115.636,1.759)
N9: (95.105,117.078,1.479)
O5': (95.304,118.151,4.725)
O3': (91.452,119.074,3.239)
Image (generated by PyMOL):