Doublet info:
Details
Nucleotide types:
GG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YI2:0234:0252
Extra
PDB:
ATOM 1 O3' C A 233 92.815 111.917 -9.533 1.00 64.50 O
ATOM 2 P G A 234 94.294 112.541 -9.564 1.00 66.50 P
ATOM 3 OP1 G A 234 94.614 112.929 -10.971 1.00 67.62 O
ATOM 4 OP2 G A 234 95.193 111.594 -8.838 1.00 62.69 O
ATOM 5 O5' G A 234 94.118 113.871 -8.715 1.00 63.72 O
ATOM 6 C5' G A 234 92.954 114.695 -8.899 1.00 64.64 C
ATOM 7 C4' G A 234 93.014 115.882 -7.980 1.00 66.67 C
ATOM 8 O4' G A 234 92.817 115.433 -6.609 1.00 68.14 O
ATOM 9 C3' G A 234 94.353 116.608 -8.009 1.00 66.88 C
ATOM 10 O3' G A 234 94.162 118.005 -7.854 1.00 67.33 O
ATOM 11 C2' G A 234 95.090 115.997 -6.823 1.00 67.00 C
ATOM 12 O2' G A 234 96.098 116.829 -6.288 1.00 65.88 O
ATOM 13 C1' G A 234 93.947 115.771 -5.833 1.00 68.08 C
ATOM 14 N9 G A 234 94.217 114.680 -4.898 1.00 69.29 N
ATOM 15 C8 G A 234 94.810 113.470 -5.183 1.00 69.61 C
ATOM 16 N7 G A 234 95.015 112.737 -4.123 1.00 70.96 N
ATOM 17 C5 G A 234 94.510 113.497 -3.074 1.00 71.24 C
ATOM 18 C6 G A 234 94.481 113.236 -1.676 1.00 70.76 C
ATOM 19 O6 G A 234 94.933 112.262 -1.065 1.00 69.70 O
ATOM 20 N1 G A 234 93.859 114.265 -0.977 1.00 70.79 N
ATOM 21 C2 G A 234 93.339 115.403 -1.542 1.00 70.60 C
ATOM 22 N2 G A 234 92.756 116.268 -0.696 1.00 70.40 N
ATOM 23 N3 G A 234 93.382 115.672 -2.838 1.00 70.42 N
ATOM 24 C4 G A 234 93.979 114.683 -3.540 1.00 70.11 C
ATOM 25 P A A 235 94.751 119.007 -8.961 1.00 65.19 P
ATOM 26 OP1 A A 235 94.353 118.484 -10.293 1.00 66.10 O
ATOM 27 OP2 A A 235 96.196 119.209 -8.652 1.00 62.56 O
ATOM 28 O5' A A 235 93.948 120.356 -8.707 1.00 62.29 O
TER
ATOM 1 O3' U B 251 96.882 118.722 6.918 1.00 50.35 O
ATOM 2 P G B 252 95.597 118.019 6.261 1.00 49.77 P
ATOM 3 OP1 G B 252 94.377 118.387 7.019 1.00 50.00 O
ATOM 4 OP2 G B 252 95.914 116.594 6.033 1.00 50.40 O
ATOM 5 O5' G B 252 95.504 118.720 4.842 1.00 51.42 O
ATOM 6 C5' G B 252 95.033 120.067 4.722 1.00 51.70 C
ATOM 7 C4' G B 252 93.970 120.126 3.665 1.00 51.86 C
ATOM 8 O4' G B 252 94.572 119.774 2.392 1.00 52.41 O
ATOM 9 C3' G B 252 92.829 119.140 3.882 1.00 52.71 C
ATOM 10 O3' G B 252 91.599 119.667 3.431 1.00 53.30 O
ATOM 11 C2' G B 252 93.269 117.908 3.095 1.00 53.70 C
ATOM 12 O2' G B 252 92.202 117.121 2.596 1.00 53.25 O
ATOM 13 C1' G B 252 94.096 118.512 1.958 1.00 53.03 C
ATOM 14 N9 G B 252 95.250 117.668 1.646 1.00 53.31 N
ATOM 15 C8 G B 252 96.029 116.969 2.540 1.00 52.62 C
ATOM 16 N7 G B 252 96.944 116.239 1.964 1.00 52.97 N
ATOM 17 C5 G B 252 96.775 116.479 0.607 1.00 53.89 C
ATOM 18 C6 G B 252 97.472 115.949 -0.521 1.00 54.70 C
ATOM 19 O6 G B 252 98.399 115.114 -0.546 1.00 52.59 O
ATOM 20 N1 G B 252 96.988 116.483 -1.713 1.00 55.20 N
ATOM 21 C2 G B 252 95.971 117.401 -1.815 1.00 54.18 C
ATOM 22 N2 G B 252 95.673 117.818 -3.055 1.00 53.07 N
ATOM 23 N3 G B 252 95.302 117.882 -0.780 1.00 54.00 N
ATOM 24 C4 G B 252 95.752 117.381 0.392 1.00 53.93 C
ATOM 25 P U B 253 90.299 119.504 4.355 1.00 52.50 P
ATOM 26 OP1 U B 253 90.641 120.091 5.671 1.00 52.75 O
ATOM 27 OP2 U B 253 89.851 118.089 4.277 1.00 52.02 O
ATOM 28 O5' U B 253 89.204 120.422 3.654 1.00 52.01 O
TER
ATOM 2 P G A 234 94.294 112.541 -9.564 1.00 66.50 P
ATOM 3 OP1 G A 234 94.614 112.929 -10.971 1.00 67.62 O
ATOM 4 OP2 G A 234 95.193 111.594 -8.838 1.00 62.69 O
ATOM 5 O5' G A 234 94.118 113.871 -8.715 1.00 63.72 O
ATOM 6 C5' G A 234 92.954 114.695 -8.899 1.00 64.64 C
ATOM 7 C4' G A 234 93.014 115.882 -7.980 1.00 66.67 C
ATOM 8 O4' G A 234 92.817 115.433 -6.609 1.00 68.14 O
ATOM 9 C3' G A 234 94.353 116.608 -8.009 1.00 66.88 C
ATOM 10 O3' G A 234 94.162 118.005 -7.854 1.00 67.33 O
ATOM 11 C2' G A 234 95.090 115.997 -6.823 1.00 67.00 C
ATOM 12 O2' G A 234 96.098 116.829 -6.288 1.00 65.88 O
ATOM 13 C1' G A 234 93.947 115.771 -5.833 1.00 68.08 C
ATOM 14 N9 G A 234 94.217 114.680 -4.898 1.00 69.29 N
ATOM 15 C8 G A 234 94.810 113.470 -5.183 1.00 69.61 C
ATOM 16 N7 G A 234 95.015 112.737 -4.123 1.00 70.96 N
ATOM 17 C5 G A 234 94.510 113.497 -3.074 1.00 71.24 C
ATOM 18 C6 G A 234 94.481 113.236 -1.676 1.00 70.76 C
ATOM 19 O6 G A 234 94.933 112.262 -1.065 1.00 69.70 O
ATOM 20 N1 G A 234 93.859 114.265 -0.977 1.00 70.79 N
ATOM 21 C2 G A 234 93.339 115.403 -1.542 1.00 70.60 C
ATOM 22 N2 G A 234 92.756 116.268 -0.696 1.00 70.40 N
ATOM 23 N3 G A 234 93.382 115.672 -2.838 1.00 70.42 N
ATOM 24 C4 G A 234 93.979 114.683 -3.540 1.00 70.11 C
ATOM 25 P A A 235 94.751 119.007 -8.961 1.00 65.19 P
ATOM 26 OP1 A A 235 94.353 118.484 -10.293 1.00 66.10 O
ATOM 27 OP2 A A 235 96.196 119.209 -8.652 1.00 62.56 O
ATOM 28 O5' A A 235 93.948 120.356 -8.707 1.00 62.29 O
TER
ATOM 1 O3' U B 251 96.882 118.722 6.918 1.00 50.35 O
ATOM 2 P G B 252 95.597 118.019 6.261 1.00 49.77 P
ATOM 3 OP1 G B 252 94.377 118.387 7.019 1.00 50.00 O
ATOM 4 OP2 G B 252 95.914 116.594 6.033 1.00 50.40 O
ATOM 5 O5' G B 252 95.504 118.720 4.842 1.00 51.42 O
ATOM 6 C5' G B 252 95.033 120.067 4.722 1.00 51.70 C
ATOM 7 C4' G B 252 93.970 120.126 3.665 1.00 51.86 C
ATOM 8 O4' G B 252 94.572 119.774 2.392 1.00 52.41 O
ATOM 9 C3' G B 252 92.829 119.140 3.882 1.00 52.71 C
ATOM 10 O3' G B 252 91.599 119.667 3.431 1.00 53.30 O
ATOM 11 C2' G B 252 93.269 117.908 3.095 1.00 53.70 C
ATOM 12 O2' G B 252 92.202 117.121 2.596 1.00 53.25 O
ATOM 13 C1' G B 252 94.096 118.512 1.958 1.00 53.03 C
ATOM 14 N9 G B 252 95.250 117.668 1.646 1.00 53.31 N
ATOM 15 C8 G B 252 96.029 116.969 2.540 1.00 52.62 C
ATOM 16 N7 G B 252 96.944 116.239 1.964 1.00 52.97 N
ATOM 17 C5 G B 252 96.775 116.479 0.607 1.00 53.89 C
ATOM 18 C6 G B 252 97.472 115.949 -0.521 1.00 54.70 C
ATOM 19 O6 G B 252 98.399 115.114 -0.546 1.00 52.59 O
ATOM 20 N1 G B 252 96.988 116.483 -1.713 1.00 55.20 N
ATOM 21 C2 G B 252 95.971 117.401 -1.815 1.00 54.18 C
ATOM 22 N2 G B 252 95.673 117.818 -3.055 1.00 53.07 N
ATOM 23 N3 G B 252 95.302 117.882 -0.780 1.00 54.00 N
ATOM 24 C4 G B 252 95.752 117.381 0.392 1.00 53.93 C
ATOM 25 P U B 253 90.299 119.504 4.355 1.00 52.50 P
ATOM 26 OP1 U B 253 90.641 120.091 5.671 1.00 52.75 O
ATOM 27 OP2 U B 253 89.851 118.089 4.277 1.00 52.02 O
ATOM 28 O5' U B 253 89.204 120.422 3.654 1.00 52.01 O
TER
Atoms:
OP1: (94.614,112.929,-10.971)
OP2: (95.193,111.594,-8.838)
C3': (94.353,116.608,-8.009)
C1': (93.947,115.771,-5.833)
C5': (92.954,114.695,-8.899)
O6: (94.933,112.262,-1.065)
O4': (92.817,115.433,-6.609)
C8: (94.810,113.470,-5.183)
C2: (93.339,115.403,-1.542)
C6: (94.481,113.236,-1.676)
C5: (94.510,113.497,-3.074)
C4: (93.979,114.683,-3.540)
P: (94.294,112.541,-9.564)
C4': (93.014,115.882,-7.980)
C2': (95.090,115.997,-6.823)
O2': (96.098,116.829,-6.288)
N1: (93.859,114.265,-0.977)
N2: (92.756,116.268,-0.696)
N3: (93.382,115.672,-2.838)
N7: (95.015,112.737,-4.123)
N9: (94.217,114.680,-4.898)
O5': (94.118,113.871,-8.715)
O3': (94.162,118.005,-7.854)
OP2: (95.193,111.594,-8.838)
C3': (94.353,116.608,-8.009)
C1': (93.947,115.771,-5.833)
C5': (92.954,114.695,-8.899)
O6: (94.933,112.262,-1.065)
O4': (92.817,115.433,-6.609)
C8: (94.810,113.470,-5.183)
C2: (93.339,115.403,-1.542)
C6: (94.481,113.236,-1.676)
C5: (94.510,113.497,-3.074)
C4: (93.979,114.683,-3.540)
P: (94.294,112.541,-9.564)
C4': (93.014,115.882,-7.980)
C2': (95.090,115.997,-6.823)
O2': (96.098,116.829,-6.288)
N1: (93.859,114.265,-0.977)
N2: (92.756,116.268,-0.696)
N3: (93.382,115.672,-2.838)
N7: (95.015,112.737,-4.123)
N9: (94.217,114.680,-4.898)
O5': (94.118,113.871,-8.715)
O3': (94.162,118.005,-7.854)
OP1: (94.377,118.387,7.019)
OP2: (95.914,116.594,6.033)
C3': (92.829,119.140,3.882)
C1': (94.096,118.512,1.958)
C5': (95.033,120.067,4.722)
O6: (98.399,115.114,-0.546)
O4': (94.572,119.774,2.392)
C8: (96.029,116.969,2.540)
C2: (95.971,117.401,-1.815)
C6: (97.472,115.949,-0.521)
C5: (96.775,116.479,0.607)
C4: (95.752,117.381,0.392)
P: (95.597,118.019,6.261)
C4': (93.970,120.126,3.665)
C2': (93.269,117.908,3.095)
O2': (92.202,117.121,2.596)
N1: (96.988,116.483,-1.713)
N2: (95.673,117.818,-3.055)
N3: (95.302,117.882,-0.780)
N7: (96.944,116.239,1.964)
N9: (95.250,117.668,1.646)
O5': (95.504,118.720,4.842)
O3': (91.599,119.667,3.431)
OP2: (95.914,116.594,6.033)
C3': (92.829,119.140,3.882)
C1': (94.096,118.512,1.958)
C5': (95.033,120.067,4.722)
O6: (98.399,115.114,-0.546)
O4': (94.572,119.774,2.392)
C8: (96.029,116.969,2.540)
C2: (95.971,117.401,-1.815)
C6: (97.472,115.949,-0.521)
C5: (96.775,116.479,0.607)
C4: (95.752,117.381,0.392)
P: (95.597,118.019,6.261)
C4': (93.970,120.126,3.665)
C2': (93.269,117.908,3.095)
O2': (92.202,117.121,2.596)
N1: (96.988,116.483,-1.713)
N2: (95.673,117.818,-3.055)
N3: (95.302,117.882,-0.780)
N7: (96.944,116.239,1.964)
N9: (95.250,117.668,1.646)
O5': (95.504,118.720,4.842)
O3': (91.599,119.667,3.431)
Image (generated by PyMOL):