Doublet info:
Details
Nucleotide types:
GG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIJ:02649:02513
Extra
PDB:
ATOM 1 O3' G A2648 39.118 148.467 127.192 1.00 45.32 O
ATOM 2 P G A2649 37.707 149.226 127.258 1.00 47.09 P
ATOM 3 OP1 G A2649 37.465 149.812 125.911 1.00 45.01 O
ATOM 4 OP2 G A2649 37.714 150.106 128.459 1.00 46.51 O
ATOM 5 O5' G A2649 36.653 148.053 127.496 1.00 46.45 O
ATOM 6 C5' G A2649 36.347 147.126 126.438 1.00 47.01 C
ATOM 7 C4' G A2649 35.489 145.998 126.949 1.00 46.42 C
ATOM 8 O4' G A2649 36.209 145.259 127.966 1.00 46.36 O
ATOM 9 C3' G A2649 34.203 146.404 127.644 1.00 47.57 C
ATOM 10 O3' G A2649 33.174 146.698 126.722 1.00 51.10 O
ATOM 11 C2' G A2649 33.893 145.167 128.472 1.00 46.21 C
ATOM 12 O2' G A2649 33.352 144.105 127.721 1.00 43.63 O
ATOM 13 C1' G A2649 35.292 144.784 128.942 1.00 46.65 C
ATOM 14 N9 G A2649 35.596 145.437 130.208 1.00 46.40 N
ATOM 15 C8 G A2649 36.292 146.604 130.392 1.00 46.20 C
ATOM 16 N7 G A2649 36.413 146.932 131.646 1.00 47.90 N
ATOM 17 C5 G A2649 35.758 145.920 132.330 1.00 47.05 C
ATOM 18 C6 G A2649 35.577 145.726 133.714 1.00 48.33 C
ATOM 19 O6 G A2649 35.989 146.428 134.648 1.00 51.08 O
ATOM 20 N1 G A2649 34.844 144.572 133.977 1.00 48.36 N
ATOM 21 C2 G A2649 34.360 143.711 133.024 1.00 47.33 C
ATOM 22 N2 G A2649 33.682 142.644 133.472 1.00 46.73 N
ATOM 23 N3 G A2649 34.533 143.880 131.727 1.00 46.81 N
ATOM 24 C4 G A2649 35.238 144.997 131.455 1.00 46.10 C
ATOM 25 P A A2650 31.962 147.660 127.159 1.00 54.95 P
ATOM 26 OP1 A A2650 32.481 149.051 127.290 1.00 54.72 O
ATOM 27 OP2 A A2650 31.260 147.026 128.314 1.00 51.44 O
ATOM 28 O5' A A2650 31.017 147.599 125.882 1.00 50.18 O
TER
ATOM 1 O3' U B2512 28.645 145.605 139.407 1.00 48.97 O
ATOM 2 P G B2513 29.825 144.569 139.757 1.00 50.12 P
ATOM 3 OP1 G B2513 29.370 143.723 140.889 1.00 50.58 O
ATOM 4 OP2 G B2513 31.099 145.323 139.872 1.00 48.15 O
ATOM 5 O5' G B2513 29.907 143.644 138.468 1.00 51.67 O
ATOM 6 C5' G B2513 28.794 142.823 138.065 1.00 51.28 C
ATOM 7 C4' G B2513 29.168 142.019 136.839 1.00 51.32 C
ATOM 8 O4' G B2513 29.330 142.919 135.702 1.00 49.78 O
ATOM 9 C3' G B2513 30.486 141.264 136.969 1.00 50.16 C
ATOM 10 O3' G B2513 30.434 140.054 136.237 1.00 51.57 O
ATOM 11 C2' G B2513 31.480 142.231 136.338 1.00 49.81 C
ATOM 12 O2' G B2513 32.668 141.626 135.871 1.00 48.03 O
ATOM 13 C1' G B2513 30.644 142.810 135.197 1.00 49.55 C
ATOM 14 N9 G B2513 31.088 144.127 134.745 1.00 49.56 N
ATOM 15 C8 G B2513 31.658 145.122 135.505 1.00 47.86 C
ATOM 16 N7 G B2513 32.010 146.165 134.804 1.00 48.02 N
ATOM 17 C5 G B2513 31.642 145.847 133.503 1.00 48.74 C
ATOM 18 C6 G B2513 31.794 146.581 132.302 1.00 48.52 C
ATOM 19 O6 G B2513 32.319 147.689 132.138 1.00 49.84 O
ATOM 20 N1 G B2513 31.271 145.895 131.212 1.00 48.24 N
ATOM 21 C2 G B2513 30.684 144.657 131.264 1.00 48.17 C
ATOM 22 N2 G B2513 30.226 144.169 130.098 1.00 43.09 N
ATOM 23 N3 G B2513 30.552 143.951 132.377 1.00 49.08 N
ATOM 24 C4 G B2513 31.051 144.602 133.451 1.00 49.29 C
ATOM 25 P A B2514 31.271 138.782 136.748 1.00 54.68 P
ATOM 26 OP1 A B2514 30.647 138.323 138.021 1.00 56.27 O
ATOM 27 OP2 A B2514 32.718 139.115 136.723 1.00 53.12 O
ATOM 28 O5' A B2514 30.973 137.682 135.638 1.00 52.57 O
TER
ATOM 2 P G A2649 37.707 149.226 127.258 1.00 47.09 P
ATOM 3 OP1 G A2649 37.465 149.812 125.911 1.00 45.01 O
ATOM 4 OP2 G A2649 37.714 150.106 128.459 1.00 46.51 O
ATOM 5 O5' G A2649 36.653 148.053 127.496 1.00 46.45 O
ATOM 6 C5' G A2649 36.347 147.126 126.438 1.00 47.01 C
ATOM 7 C4' G A2649 35.489 145.998 126.949 1.00 46.42 C
ATOM 8 O4' G A2649 36.209 145.259 127.966 1.00 46.36 O
ATOM 9 C3' G A2649 34.203 146.404 127.644 1.00 47.57 C
ATOM 10 O3' G A2649 33.174 146.698 126.722 1.00 51.10 O
ATOM 11 C2' G A2649 33.893 145.167 128.472 1.00 46.21 C
ATOM 12 O2' G A2649 33.352 144.105 127.721 1.00 43.63 O
ATOM 13 C1' G A2649 35.292 144.784 128.942 1.00 46.65 C
ATOM 14 N9 G A2649 35.596 145.437 130.208 1.00 46.40 N
ATOM 15 C8 G A2649 36.292 146.604 130.392 1.00 46.20 C
ATOM 16 N7 G A2649 36.413 146.932 131.646 1.00 47.90 N
ATOM 17 C5 G A2649 35.758 145.920 132.330 1.00 47.05 C
ATOM 18 C6 G A2649 35.577 145.726 133.714 1.00 48.33 C
ATOM 19 O6 G A2649 35.989 146.428 134.648 1.00 51.08 O
ATOM 20 N1 G A2649 34.844 144.572 133.977 1.00 48.36 N
ATOM 21 C2 G A2649 34.360 143.711 133.024 1.00 47.33 C
ATOM 22 N2 G A2649 33.682 142.644 133.472 1.00 46.73 N
ATOM 23 N3 G A2649 34.533 143.880 131.727 1.00 46.81 N
ATOM 24 C4 G A2649 35.238 144.997 131.455 1.00 46.10 C
ATOM 25 P A A2650 31.962 147.660 127.159 1.00 54.95 P
ATOM 26 OP1 A A2650 32.481 149.051 127.290 1.00 54.72 O
ATOM 27 OP2 A A2650 31.260 147.026 128.314 1.00 51.44 O
ATOM 28 O5' A A2650 31.017 147.599 125.882 1.00 50.18 O
TER
ATOM 1 O3' U B2512 28.645 145.605 139.407 1.00 48.97 O
ATOM 2 P G B2513 29.825 144.569 139.757 1.00 50.12 P
ATOM 3 OP1 G B2513 29.370 143.723 140.889 1.00 50.58 O
ATOM 4 OP2 G B2513 31.099 145.323 139.872 1.00 48.15 O
ATOM 5 O5' G B2513 29.907 143.644 138.468 1.00 51.67 O
ATOM 6 C5' G B2513 28.794 142.823 138.065 1.00 51.28 C
ATOM 7 C4' G B2513 29.168 142.019 136.839 1.00 51.32 C
ATOM 8 O4' G B2513 29.330 142.919 135.702 1.00 49.78 O
ATOM 9 C3' G B2513 30.486 141.264 136.969 1.00 50.16 C
ATOM 10 O3' G B2513 30.434 140.054 136.237 1.00 51.57 O
ATOM 11 C2' G B2513 31.480 142.231 136.338 1.00 49.81 C
ATOM 12 O2' G B2513 32.668 141.626 135.871 1.00 48.03 O
ATOM 13 C1' G B2513 30.644 142.810 135.197 1.00 49.55 C
ATOM 14 N9 G B2513 31.088 144.127 134.745 1.00 49.56 N
ATOM 15 C8 G B2513 31.658 145.122 135.505 1.00 47.86 C
ATOM 16 N7 G B2513 32.010 146.165 134.804 1.00 48.02 N
ATOM 17 C5 G B2513 31.642 145.847 133.503 1.00 48.74 C
ATOM 18 C6 G B2513 31.794 146.581 132.302 1.00 48.52 C
ATOM 19 O6 G B2513 32.319 147.689 132.138 1.00 49.84 O
ATOM 20 N1 G B2513 31.271 145.895 131.212 1.00 48.24 N
ATOM 21 C2 G B2513 30.684 144.657 131.264 1.00 48.17 C
ATOM 22 N2 G B2513 30.226 144.169 130.098 1.00 43.09 N
ATOM 23 N3 G B2513 30.552 143.951 132.377 1.00 49.08 N
ATOM 24 C4 G B2513 31.051 144.602 133.451 1.00 49.29 C
ATOM 25 P A B2514 31.271 138.782 136.748 1.00 54.68 P
ATOM 26 OP1 A B2514 30.647 138.323 138.021 1.00 56.27 O
ATOM 27 OP2 A B2514 32.718 139.115 136.723 1.00 53.12 O
ATOM 28 O5' A B2514 30.973 137.682 135.638 1.00 52.57 O
TER
Atoms:
OP1: (37.465,149.812,125.911)
OP2: (37.714,150.106,128.459)
C3': (34.203,146.404,127.644)
C1': (35.292,144.784,128.942)
C5': (36.347,147.126,126.438)
O6: (35.989,146.428,134.648)
O4': (36.209,145.259,127.966)
C8: (36.292,146.604,130.392)
C2: (34.360,143.711,133.024)
C6: (35.577,145.726,133.714)
C5: (35.758,145.920,132.330)
C4: (35.238,144.997,131.455)
P: (37.707,149.226,127.258)
C4': (35.489,145.998,126.949)
C2': (33.893,145.167,128.472)
O2': (33.352,144.105,127.721)
N1: (34.844,144.572,133.977)
N2: (33.682,142.644,133.472)
N3: (34.533,143.880,131.727)
N7: (36.413,146.932,131.646)
N9: (35.596,145.437,130.208)
O5': (36.653,148.053,127.496)
O3': (33.174,146.698,126.722)
OP2: (37.714,150.106,128.459)
C3': (34.203,146.404,127.644)
C1': (35.292,144.784,128.942)
C5': (36.347,147.126,126.438)
O6: (35.989,146.428,134.648)
O4': (36.209,145.259,127.966)
C8: (36.292,146.604,130.392)
C2: (34.360,143.711,133.024)
C6: (35.577,145.726,133.714)
C5: (35.758,145.920,132.330)
C4: (35.238,144.997,131.455)
P: (37.707,149.226,127.258)
C4': (35.489,145.998,126.949)
C2': (33.893,145.167,128.472)
O2': (33.352,144.105,127.721)
N1: (34.844,144.572,133.977)
N2: (33.682,142.644,133.472)
N3: (34.533,143.880,131.727)
N7: (36.413,146.932,131.646)
N9: (35.596,145.437,130.208)
O5': (36.653,148.053,127.496)
O3': (33.174,146.698,126.722)
OP1: (29.370,143.723,140.889)
OP2: (31.099,145.323,139.872)
C3': (30.486,141.264,136.969)
C1': (30.644,142.810,135.197)
C5': (28.794,142.823,138.065)
O6: (32.319,147.689,132.138)
O4': (29.330,142.919,135.702)
C8: (31.658,145.122,135.505)
C2: (30.684,144.657,131.264)
C6: (31.794,146.581,132.302)
C5: (31.642,145.847,133.503)
C4: (31.051,144.602,133.451)
P: (29.825,144.569,139.757)
C4': (29.168,142.019,136.839)
C2': (31.480,142.231,136.338)
O2': (32.668,141.626,135.871)
N1: (31.271,145.895,131.212)
N2: (30.226,144.169,130.098)
N3: (30.552,143.951,132.377)
N7: (32.010,146.165,134.804)
N9: (31.088,144.127,134.745)
O5': (29.907,143.644,138.468)
O3': (30.434,140.054,136.237)
OP2: (31.099,145.323,139.872)
C3': (30.486,141.264,136.969)
C1': (30.644,142.810,135.197)
C5': (28.794,142.823,138.065)
O6: (32.319,147.689,132.138)
O4': (29.330,142.919,135.702)
C8: (31.658,145.122,135.505)
C2: (30.684,144.657,131.264)
C6: (31.794,146.581,132.302)
C5: (31.642,145.847,133.503)
C4: (31.051,144.602,133.451)
P: (29.825,144.569,139.757)
C4': (29.168,142.019,136.839)
C2': (31.480,142.231,136.338)
O2': (32.668,141.626,135.871)
N1: (31.271,145.895,131.212)
N2: (30.226,144.169,130.098)
N3: (30.552,143.951,132.377)
N7: (32.010,146.165,134.804)
N9: (31.088,144.127,134.745)
O5': (29.907,143.644,138.468)
O3': (30.434,140.054,136.237)
Image (generated by PyMOL):