ClaRNA

Doublet info:

Details

Nucleotide types: GG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1YIJ:0908:02125

Extra

PDB:
ATOM 1 O3' C A 907 68.185 96.626 75.300 1.00 30.13 O
ATOM 2 P G A 908 66.653 96.407 74.901 1.00 28.26 P
ATOM 3 OP1 G A 908 66.581 95.680 73.611 1.00 27.56 O
ATOM 4 OP2 G A 908 66.012 97.736 75.015 1.00 27.81 O
ATOM 5 O5' G A 908 66.126 95.478 76.087 1.00 28.61 O
ATOM 6 C5' G A 908 64.767 94.995 76.123 1.00 28.98 C
ATOM 7 C4' G A 908 64.416 94.514 77.513 1.00 29.75 C
ATOM 8 O4' G A 908 65.225 93.372 77.860 1.00 31.11 O
ATOM 9 C3' G A 908 64.721 95.487 78.640 1.00 31.00 C
ATOM 10 O3' G A 908 63.655 96.437 78.720 1.00 31.81 O
ATOM 11 C2' G A 908 64.802 94.576 79.877 1.00 30.57 C
ATOM 12 O2' G A 908 63.566 94.329 80.509 1.00 29.68 O
ATOM 13 C1' G A 908 65.226 93.241 79.262 1.00 30.28 C
ATOM 14 N9 G A 908 66.465 92.603 79.693 1.00 29.96 N
ATOM 15 C8 G A 908 66.568 91.306 80.121 1.00 29.78 C
ATOM 16 N7 G A 908 67.789 90.948 80.389 1.00 30.66 N
ATOM 17 C5 G A 908 68.543 92.082 80.137 1.00 31.48 C
ATOM 18 C6 G A 908 69.943 92.286 80.235 1.00 31.80 C
ATOM 19 O6 G A 908 70.814 91.476 80.564 1.00 31.09 O
ATOM 20 N1 G A 908 70.297 93.585 79.893 1.00 31.70 N
ATOM 21 C2 G A 908 69.420 94.560 79.495 1.00 31.24 C
ATOM 22 N2 G A 908 69.973 95.742 79.187 1.00 30.21 N
ATOM 23 N3 G A 908 68.102 94.385 79.397 1.00 30.77 N
ATOM 24 C4 G A 908 67.739 93.125 79.726 1.00 30.75 C
ATOM 25 P A A 909 63.930 97.912 79.285 1.00 33.03 P
ATOM 26 OP1 A A 909 62.976 98.867 78.654 1.00 31.65 O
ATOM 27 OP2 A A 909 65.390 98.168 79.212 1.00 35.19 O
ATOM 28 O5' A A 909 63.550 97.811 80.823 1.00 34.56 O
TER

ATOM 1 O3' U B2124 79.373 99.456 79.494 1.00 28.68 O
ATOM 2 P G B2125 78.595 99.855 80.853 1.00 29.60 P
ATOM 3 OP1 G B2125 78.356 101.311 80.944 1.00 27.72 O
ATOM 4 OP2 G B2125 79.295 99.162 81.964 1.00 30.56 O
ATOM 5 O5' G B2125 77.175 99.165 80.677 1.00 32.62 O
ATOM 6 C5' G B2125 76.335 99.495 79.561 1.00 33.40 C
ATOM 7 C4' G B2125 75.311 98.410 79.342 1.00 33.35 C
ATOM 8 O4' G B2125 75.975 97.181 78.954 1.00 32.09 O
ATOM 9 C3' G B2125 74.491 98.000 80.553 1.00 31.00 C
ATOM 10 O3' G B2125 73.429 98.894 80.809 1.00 31.50 O
ATOM 11 C2' G B2125 73.985 96.638 80.124 1.00 31.59 C
ATOM 12 O2' G B2125 72.929 96.739 79.194 1.00 29.89 O
ATOM 13 C1' G B2125 75.228 96.075 79.429 1.00 34.11 C
ATOM 14 N9 G B2125 76.068 95.319 80.351 1.00 38.27 N
ATOM 15 C8 G B2125 77.318 95.662 80.806 1.00 39.72 C
ATOM 16 N7 G B2125 77.805 94.803 81.658 1.00 42.00 N
ATOM 17 C5 G B2125 76.819 93.833 81.772 1.00 40.79 C
ATOM 18 C6 G B2125 76.771 92.670 82.569 1.00 41.01 C
ATOM 19 O6 G B2125 77.611 92.253 83.365 1.00 43.06 O
ATOM 20 N1 G B2125 75.589 91.967 82.379 1.00 42.23 N
ATOM 21 C2 G B2125 74.580 92.337 81.529 1.00 41.82 C
ATOM 22 N2 G B2125 73.527 91.521 81.477 1.00 42.94 N
ATOM 23 N3 G B2125 74.606 93.426 80.784 1.00 40.99 N
ATOM 24 C4 G B2125 75.748 94.125 80.958 1.00 40.28 C
ATOM 25 P A B2126 73.018 99.220 82.328 1.00 36.26 P
ATOM 26 OP1 A B2126 72.071 100.372 82.289 1.00 34.33 O
ATOM 27 OP2 A B2126 74.249 99.302 83.165 1.00 34.43 O
ATOM 28 O5' A B2126 72.209 97.931 82.786 1.00 35.75 O
TER

Atoms:
OP1: (66.581,95.680,73.611)
OP2: (66.012,97.736,75.015)
C3': (64.721,95.487,78.640)
C1': (65.226,93.241,79.262)
C5': (64.767,94.995,76.123)
O6: (70.814,91.476,80.564)
O4': (65.225,93.372,77.860)
C8: (66.568,91.306,80.121)
C2: (69.420,94.560,79.495)
C6: (69.943,92.286,80.235)
C5: (68.543,92.082,80.137)
C4: (67.739,93.125,79.726)
P: (66.653,96.407,74.901)
C4': (64.416,94.514,77.513)
C2': (64.802,94.576,79.877)
O2': (63.566,94.329,80.509)
N1: (70.297,93.585,79.893)
N2: (69.973,95.742,79.187)
N3: (68.102,94.385,79.397)
N7: (67.789,90.948,80.389)
N9: (66.465,92.603,79.693)
O5': (66.126,95.478,76.087)
O3': (63.655,96.437,78.720)
OP1: (78.356,101.311,80.944)
OP2: (79.295,99.162,81.964)
C3': (74.491,98.000,80.553)
C1': (75.228,96.075,79.429)
C5': (76.335,99.495,79.561)
O6: (77.611,92.253,83.365)
O4': (75.975,97.181,78.954)
C8: (77.318,95.662,80.806)
C2: (74.580,92.337,81.529)
C6: (76.771,92.670,82.569)
C5: (76.819,93.833,81.772)
C4: (75.748,94.125,80.958)
P: (78.595,99.855,80.853)
C4': (75.311,98.410,79.342)
C2': (73.985,96.638,80.124)
O2': (72.929,96.739,79.194)
N1: (75.589,91.967,82.379)
N2: (73.527,91.521,81.477)
N3: (74.606,93.426,80.784)
N7: (77.805,94.803,81.658)
N9: (76.068,95.319,80.351)
O5': (77.175,99.165,80.677)
O3': (73.429,98.894,80.809)
Image (generated by PyMOL):
PyMOL image
show in jmol