Doublet info:
Details
Nucleotide types:
GG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJ9:02649:02513
Extra
PDB:
ATOM 1 O3' G A2648 39.273 148.680 127.478 1.00 53.17 O
ATOM 2 P G A2649 37.882 149.467 127.577 1.00 56.06 P
ATOM 3 OP1 G A2649 37.644 150.082 126.246 1.00 55.68 O
ATOM 4 OP2 G A2649 37.914 150.333 128.786 1.00 55.63 O
ATOM 5 O5' G A2649 36.804 148.312 127.816 1.00 55.19 O
ATOM 6 C5' G A2649 36.436 147.418 126.747 1.00 55.11 C
ATOM 7 C4' G A2649 35.632 146.255 127.273 1.00 54.07 C
ATOM 8 O4' G A2649 36.408 145.541 128.262 1.00 54.42 O
ATOM 9 C3' G A2649 34.347 146.601 128.002 1.00 55.25 C
ATOM 10 O3' G A2649 33.286 146.821 127.095 1.00 59.64 O
ATOM 11 C2' G A2649 34.117 145.350 128.829 1.00 54.42 C
ATOM 12 O2' G A2649 33.627 144.269 128.071 1.00 51.48 O
ATOM 13 C1' G A2649 35.543 145.040 129.268 1.00 55.24 C
ATOM 14 N9 G A2649 35.841 145.739 130.510 1.00 55.64 N
ATOM 15 C8 G A2649 36.511 146.927 130.654 1.00 56.05 C
ATOM 16 N7 G A2649 36.604 147.312 131.895 1.00 57.65 N
ATOM 17 C5 G A2649 35.960 146.315 132.611 1.00 57.82 C
ATOM 18 C6 G A2649 35.749 146.179 134.002 1.00 59.34 C
ATOM 19 O6 G A2649 36.096 146.948 134.913 1.00 62.47 O
ATOM 20 N1 G A2649 35.059 145.008 134.300 1.00 58.27 N
ATOM 21 C2 G A2649 34.628 144.091 133.377 1.00 57.40 C
ATOM 22 N2 G A2649 33.985 143.023 133.859 1.00 58.43 N
ATOM 23 N3 G A2649 34.814 144.211 132.078 1.00 57.02 N
ATOM 24 C4 G A2649 35.485 145.337 131.769 1.00 56.57 C
ATOM 25 P A A2650 32.117 147.861 127.463 1.00 62.24 P
ATOM 26 OP1 A A2650 32.715 149.225 127.559 1.00 61.79 O
ATOM 27 OP2 A A2650 31.360 147.305 128.621 1.00 60.07 O
ATOM 28 O5' A A2650 31.197 147.798 126.167 1.00 58.73 O
TER
ATOM 1 O3' U B2512 28.999 145.891 139.907 1.00 55.00 O
ATOM 2 P G B2513 30.155 144.791 140.090 1.00 55.45 P
ATOM 3 OP1 G B2513 29.731 143.868 141.168 1.00 54.59 O
ATOM 4 OP2 G B2513 31.461 145.486 140.191 1.00 53.44 O
ATOM 5 O5' G B2513 30.131 143.995 138.713 1.00 58.01 O
ATOM 6 C5' G B2513 28.991 143.199 138.328 1.00 58.79 C
ATOM 7 C4' G B2513 29.349 142.319 137.151 1.00 59.06 C
ATOM 8 O4' G B2513 29.541 143.148 135.969 1.00 58.51 O
ATOM 9 C3' G B2513 30.640 141.532 137.326 1.00 58.50 C
ATOM 10 O3' G B2513 30.553 140.294 136.639 1.00 60.94 O
ATOM 11 C2' G B2513 31.668 142.447 136.678 1.00 57.98 C
ATOM 12 O2' G B2513 32.835 141.778 136.251 1.00 56.93 O
ATOM 13 C1' G B2513 30.869 143.022 135.506 1.00 58.05 C
ATOM 14 N9 G B2513 31.320 144.343 135.074 1.00 57.14 N
ATOM 15 C8 G B2513 31.859 145.330 135.861 1.00 56.24 C
ATOM 16 N7 G B2513 32.191 146.398 135.192 1.00 56.29 N
ATOM 17 C5 G B2513 31.849 146.104 133.883 1.00 56.35 C
ATOM 18 C6 G B2513 31.993 146.876 132.707 1.00 57.11 C
ATOM 19 O6 G B2513 32.474 148.015 132.586 1.00 57.09 O
ATOM 20 N1 G B2513 31.518 146.197 131.588 1.00 57.16 N
ATOM 21 C2 G B2513 30.980 144.933 131.601 1.00 57.03 C
ATOM 22 N2 G B2513 30.582 144.446 130.418 1.00 55.32 N
ATOM 23 N3 G B2513 30.845 144.200 132.695 1.00 57.37 N
ATOM 24 C4 G B2513 31.299 144.842 133.792 1.00 57.00 C
ATOM 25 P A B2514 31.441 139.045 137.132 1.00 64.06 P
ATOM 26 OP1 A B2514 30.865 138.528 138.407 1.00 64.18 O
ATOM 27 OP2 A B2514 32.878 139.432 137.082 1.00 62.03 O
ATOM 28 O5' A B2514 31.168 137.945 136.020 1.00 60.96 O
TER
ATOM 2 P G A2649 37.882 149.467 127.577 1.00 56.06 P
ATOM 3 OP1 G A2649 37.644 150.082 126.246 1.00 55.68 O
ATOM 4 OP2 G A2649 37.914 150.333 128.786 1.00 55.63 O
ATOM 5 O5' G A2649 36.804 148.312 127.816 1.00 55.19 O
ATOM 6 C5' G A2649 36.436 147.418 126.747 1.00 55.11 C
ATOM 7 C4' G A2649 35.632 146.255 127.273 1.00 54.07 C
ATOM 8 O4' G A2649 36.408 145.541 128.262 1.00 54.42 O
ATOM 9 C3' G A2649 34.347 146.601 128.002 1.00 55.25 C
ATOM 10 O3' G A2649 33.286 146.821 127.095 1.00 59.64 O
ATOM 11 C2' G A2649 34.117 145.350 128.829 1.00 54.42 C
ATOM 12 O2' G A2649 33.627 144.269 128.071 1.00 51.48 O
ATOM 13 C1' G A2649 35.543 145.040 129.268 1.00 55.24 C
ATOM 14 N9 G A2649 35.841 145.739 130.510 1.00 55.64 N
ATOM 15 C8 G A2649 36.511 146.927 130.654 1.00 56.05 C
ATOM 16 N7 G A2649 36.604 147.312 131.895 1.00 57.65 N
ATOM 17 C5 G A2649 35.960 146.315 132.611 1.00 57.82 C
ATOM 18 C6 G A2649 35.749 146.179 134.002 1.00 59.34 C
ATOM 19 O6 G A2649 36.096 146.948 134.913 1.00 62.47 O
ATOM 20 N1 G A2649 35.059 145.008 134.300 1.00 58.27 N
ATOM 21 C2 G A2649 34.628 144.091 133.377 1.00 57.40 C
ATOM 22 N2 G A2649 33.985 143.023 133.859 1.00 58.43 N
ATOM 23 N3 G A2649 34.814 144.211 132.078 1.00 57.02 N
ATOM 24 C4 G A2649 35.485 145.337 131.769 1.00 56.57 C
ATOM 25 P A A2650 32.117 147.861 127.463 1.00 62.24 P
ATOM 26 OP1 A A2650 32.715 149.225 127.559 1.00 61.79 O
ATOM 27 OP2 A A2650 31.360 147.305 128.621 1.00 60.07 O
ATOM 28 O5' A A2650 31.197 147.798 126.167 1.00 58.73 O
TER
ATOM 1 O3' U B2512 28.999 145.891 139.907 1.00 55.00 O
ATOM 2 P G B2513 30.155 144.791 140.090 1.00 55.45 P
ATOM 3 OP1 G B2513 29.731 143.868 141.168 1.00 54.59 O
ATOM 4 OP2 G B2513 31.461 145.486 140.191 1.00 53.44 O
ATOM 5 O5' G B2513 30.131 143.995 138.713 1.00 58.01 O
ATOM 6 C5' G B2513 28.991 143.199 138.328 1.00 58.79 C
ATOM 7 C4' G B2513 29.349 142.319 137.151 1.00 59.06 C
ATOM 8 O4' G B2513 29.541 143.148 135.969 1.00 58.51 O
ATOM 9 C3' G B2513 30.640 141.532 137.326 1.00 58.50 C
ATOM 10 O3' G B2513 30.553 140.294 136.639 1.00 60.94 O
ATOM 11 C2' G B2513 31.668 142.447 136.678 1.00 57.98 C
ATOM 12 O2' G B2513 32.835 141.778 136.251 1.00 56.93 O
ATOM 13 C1' G B2513 30.869 143.022 135.506 1.00 58.05 C
ATOM 14 N9 G B2513 31.320 144.343 135.074 1.00 57.14 N
ATOM 15 C8 G B2513 31.859 145.330 135.861 1.00 56.24 C
ATOM 16 N7 G B2513 32.191 146.398 135.192 1.00 56.29 N
ATOM 17 C5 G B2513 31.849 146.104 133.883 1.00 56.35 C
ATOM 18 C6 G B2513 31.993 146.876 132.707 1.00 57.11 C
ATOM 19 O6 G B2513 32.474 148.015 132.586 1.00 57.09 O
ATOM 20 N1 G B2513 31.518 146.197 131.588 1.00 57.16 N
ATOM 21 C2 G B2513 30.980 144.933 131.601 1.00 57.03 C
ATOM 22 N2 G B2513 30.582 144.446 130.418 1.00 55.32 N
ATOM 23 N3 G B2513 30.845 144.200 132.695 1.00 57.37 N
ATOM 24 C4 G B2513 31.299 144.842 133.792 1.00 57.00 C
ATOM 25 P A B2514 31.441 139.045 137.132 1.00 64.06 P
ATOM 26 OP1 A B2514 30.865 138.528 138.407 1.00 64.18 O
ATOM 27 OP2 A B2514 32.878 139.432 137.082 1.00 62.03 O
ATOM 28 O5' A B2514 31.168 137.945 136.020 1.00 60.96 O
TER
Atoms:
OP1: (37.644,150.082,126.246)
OP2: (37.914,150.333,128.786)
C3': (34.347,146.601,128.002)
C1': (35.543,145.040,129.268)
C5': (36.436,147.418,126.747)
O6: (36.096,146.948,134.913)
O4': (36.408,145.541,128.262)
C8: (36.511,146.927,130.654)
C2: (34.628,144.091,133.377)
C6: (35.749,146.179,134.002)
C5: (35.960,146.315,132.611)
C4: (35.485,145.337,131.769)
P: (37.882,149.467,127.577)
C4': (35.632,146.255,127.273)
C2': (34.117,145.350,128.829)
O2': (33.627,144.269,128.071)
N1: (35.059,145.008,134.300)
N2: (33.985,143.023,133.859)
N3: (34.814,144.211,132.078)
N7: (36.604,147.312,131.895)
N9: (35.841,145.739,130.510)
O5': (36.804,148.312,127.816)
O3': (33.286,146.821,127.095)
OP2: (37.914,150.333,128.786)
C3': (34.347,146.601,128.002)
C1': (35.543,145.040,129.268)
C5': (36.436,147.418,126.747)
O6: (36.096,146.948,134.913)
O4': (36.408,145.541,128.262)
C8: (36.511,146.927,130.654)
C2: (34.628,144.091,133.377)
C6: (35.749,146.179,134.002)
C5: (35.960,146.315,132.611)
C4: (35.485,145.337,131.769)
P: (37.882,149.467,127.577)
C4': (35.632,146.255,127.273)
C2': (34.117,145.350,128.829)
O2': (33.627,144.269,128.071)
N1: (35.059,145.008,134.300)
N2: (33.985,143.023,133.859)
N3: (34.814,144.211,132.078)
N7: (36.604,147.312,131.895)
N9: (35.841,145.739,130.510)
O5': (36.804,148.312,127.816)
O3': (33.286,146.821,127.095)
OP1: (29.731,143.868,141.168)
OP2: (31.461,145.486,140.191)
C3': (30.640,141.532,137.326)
C1': (30.869,143.022,135.506)
C5': (28.991,143.199,138.328)
O6: (32.474,148.015,132.586)
O4': (29.541,143.148,135.969)
C8: (31.859,145.330,135.861)
C2: (30.980,144.933,131.601)
C6: (31.993,146.876,132.707)
C5: (31.849,146.104,133.883)
C4: (31.299,144.842,133.792)
P: (30.155,144.791,140.090)
C4': (29.349,142.319,137.151)
C2': (31.668,142.447,136.678)
O2': (32.835,141.778,136.251)
N1: (31.518,146.197,131.588)
N2: (30.582,144.446,130.418)
N3: (30.845,144.200,132.695)
N7: (32.191,146.398,135.192)
N9: (31.320,144.343,135.074)
O5': (30.131,143.995,138.713)
O3': (30.553,140.294,136.639)
OP2: (31.461,145.486,140.191)
C3': (30.640,141.532,137.326)
C1': (30.869,143.022,135.506)
C5': (28.991,143.199,138.328)
O6: (32.474,148.015,132.586)
O4': (29.541,143.148,135.969)
C8: (31.859,145.330,135.861)
C2: (30.980,144.933,131.601)
C6: (31.993,146.876,132.707)
C5: (31.849,146.104,133.883)
C4: (31.299,144.842,133.792)
P: (30.155,144.791,140.090)
C4': (29.349,142.319,137.151)
C2': (31.668,142.447,136.678)
O2': (32.835,141.778,136.251)
N1: (31.518,146.197,131.588)
N2: (30.582,144.446,130.418)
N3: (30.845,144.200,132.695)
N7: (32.191,146.398,135.192)
N9: (31.320,144.343,135.074)
O5': (30.131,143.995,138.713)
O3': (30.553,140.294,136.639)
Image (generated by PyMOL):