Doublet info:
Details
Nucleotide types:
GG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJ9:0446:0452
Extra
PDB:
ATOM 1 O3' U A 445 50.231 130.218 53.570 1.00 40.20 O
ATOM 2 P G A 446 50.696 130.275 55.111 1.00 39.76 P
ATOM 3 OP1 G A 446 51.987 129.531 55.135 1.00 38.30 O
ATOM 4 OP2 G A 446 49.580 129.839 55.988 1.00 37.61 O
ATOM 5 O5' G A 446 50.966 131.821 55.383 1.00 36.70 O
ATOM 6 C5' G A 446 50.978 132.342 56.716 1.00 34.41 C
ATOM 7 C4' G A 446 51.230 133.826 56.688 1.00 34.88 C
ATOM 8 O4' G A 446 52.538 134.087 56.123 1.00 34.78 O
ATOM 9 C3' G A 446 50.277 134.629 55.827 1.00 35.06 C
ATOM 10 O3' G A 446 49.107 134.929 56.585 1.00 37.75 O
ATOM 11 C2' G A 446 51.096 135.875 55.506 1.00 34.31 C
ATOM 12 O2' G A 446 51.098 136.799 56.571 1.00 33.13 O
ATOM 13 C1' G A 446 52.508 135.299 55.399 1.00 33.14 C
ATOM 14 N9 G A 446 53.035 135.041 54.064 1.00 34.32 N
ATOM 15 C8 G A 446 53.368 133.816 53.536 1.00 34.58 C
ATOM 16 N7 G A 446 53.930 133.898 52.364 1.00 34.03 N
ATOM 17 C5 G A 446 53.953 135.257 52.089 1.00 33.19 C
ATOM 18 C6 G A 446 54.473 135.945 50.986 1.00 32.99 C
ATOM 19 O6 G A 446 55.083 135.484 50.020 1.00 35.88 O
ATOM 20 N1 G A 446 54.258 137.316 51.085 1.00 32.83 N
ATOM 21 C2 G A 446 53.647 137.948 52.137 1.00 32.71 C
ATOM 22 N2 G A 446 53.537 139.283 52.049 1.00 30.61 N
ATOM 23 N3 G A 446 53.181 137.314 53.199 1.00 33.33 N
ATOM 24 C4 G A 446 53.367 135.976 53.108 1.00 34.09 C
ATOM 25 P A A 447 47.662 134.888 55.884 1.00 38.99 P
ATOM 26 OP1 A A 447 46.652 135.161 56.923 1.00 36.73 O
ATOM 27 OP2 A A 447 47.578 133.633 55.098 1.00 41.21 O
ATOM 28 O5' A A 447 47.696 136.127 54.891 1.00 38.38 O
TER
ATOM 1 O3' A B 451 52.706 142.538 49.797 1.00 51.65 O
ATOM 2 P G B 452 53.113 142.198 48.295 1.00 53.41 P
ATOM 3 OP1 G B 452 53.460 143.495 47.657 1.00 52.44 O
ATOM 4 OP2 G B 452 52.048 141.347 47.703 1.00 53.34 O
ATOM 5 O5' G B 452 54.434 141.327 48.490 1.00 50.01 O
ATOM 6 C5' G B 452 55.691 141.952 48.830 1.00 49.32 C
ATOM 7 C4' G B 452 55.737 142.306 50.306 1.00 49.39 C
ATOM 8 O4' G B 452 55.558 141.115 51.134 1.00 50.10 O
ATOM 9 C3' G B 452 57.043 142.933 50.794 1.00 48.41 C
ATOM 10 O3' G B 452 56.697 143.803 51.867 1.00 49.50 O
ATOM 11 C2' G B 452 57.797 141.725 51.339 1.00 45.57 C
ATOM 12 O2' G B 452 58.815 142.068 52.249 1.00 45.86 O
ATOM 13 C1' G B 452 56.648 141.004 52.034 1.00 44.87 C
ATOM 14 N9 G B 452 56.828 139.605 52.404 1.00 39.33 N
ATOM 15 C8 G B 452 57.416 138.607 51.670 1.00 39.07 C
ATOM 16 N7 G B 452 57.377 137.447 52.264 1.00 37.19 N
ATOM 17 C5 G B 452 56.731 137.699 53.466 1.00 36.32 C
ATOM 18 C6 G B 452 56.381 136.823 54.521 1.00 35.91 C
ATOM 19 O6 G B 452 56.567 135.601 54.602 1.00 38.40 O
ATOM 20 N1 G B 452 55.739 137.497 55.551 1.00 32.82 N
ATOM 21 C2 G B 452 55.458 138.830 55.560 1.00 33.78 C
ATOM 22 N2 G B 452 54.826 139.286 56.640 1.00 34.95 N
ATOM 23 N3 G B 452 55.769 139.656 54.582 1.00 33.88 N
ATOM 24 C4 G B 452 56.400 139.027 53.573 1.00 36.08 C
ATOM 25 P U B 453 57.740 144.903 52.392 1.00 52.77 P
ATOM 26 OP1 U B 453 58.551 145.378 51.237 1.00 51.13 O
ATOM 27 OP2 U B 453 58.429 144.374 53.610 1.00 50.51 O
ATOM 28 O5' U B 453 56.787 146.090 52.855 1.00 48.07 O
TER
ATOM 2 P G A 446 50.696 130.275 55.111 1.00 39.76 P
ATOM 3 OP1 G A 446 51.987 129.531 55.135 1.00 38.30 O
ATOM 4 OP2 G A 446 49.580 129.839 55.988 1.00 37.61 O
ATOM 5 O5' G A 446 50.966 131.821 55.383 1.00 36.70 O
ATOM 6 C5' G A 446 50.978 132.342 56.716 1.00 34.41 C
ATOM 7 C4' G A 446 51.230 133.826 56.688 1.00 34.88 C
ATOM 8 O4' G A 446 52.538 134.087 56.123 1.00 34.78 O
ATOM 9 C3' G A 446 50.277 134.629 55.827 1.00 35.06 C
ATOM 10 O3' G A 446 49.107 134.929 56.585 1.00 37.75 O
ATOM 11 C2' G A 446 51.096 135.875 55.506 1.00 34.31 C
ATOM 12 O2' G A 446 51.098 136.799 56.571 1.00 33.13 O
ATOM 13 C1' G A 446 52.508 135.299 55.399 1.00 33.14 C
ATOM 14 N9 G A 446 53.035 135.041 54.064 1.00 34.32 N
ATOM 15 C8 G A 446 53.368 133.816 53.536 1.00 34.58 C
ATOM 16 N7 G A 446 53.930 133.898 52.364 1.00 34.03 N
ATOM 17 C5 G A 446 53.953 135.257 52.089 1.00 33.19 C
ATOM 18 C6 G A 446 54.473 135.945 50.986 1.00 32.99 C
ATOM 19 O6 G A 446 55.083 135.484 50.020 1.00 35.88 O
ATOM 20 N1 G A 446 54.258 137.316 51.085 1.00 32.83 N
ATOM 21 C2 G A 446 53.647 137.948 52.137 1.00 32.71 C
ATOM 22 N2 G A 446 53.537 139.283 52.049 1.00 30.61 N
ATOM 23 N3 G A 446 53.181 137.314 53.199 1.00 33.33 N
ATOM 24 C4 G A 446 53.367 135.976 53.108 1.00 34.09 C
ATOM 25 P A A 447 47.662 134.888 55.884 1.00 38.99 P
ATOM 26 OP1 A A 447 46.652 135.161 56.923 1.00 36.73 O
ATOM 27 OP2 A A 447 47.578 133.633 55.098 1.00 41.21 O
ATOM 28 O5' A A 447 47.696 136.127 54.891 1.00 38.38 O
TER
ATOM 1 O3' A B 451 52.706 142.538 49.797 1.00 51.65 O
ATOM 2 P G B 452 53.113 142.198 48.295 1.00 53.41 P
ATOM 3 OP1 G B 452 53.460 143.495 47.657 1.00 52.44 O
ATOM 4 OP2 G B 452 52.048 141.347 47.703 1.00 53.34 O
ATOM 5 O5' G B 452 54.434 141.327 48.490 1.00 50.01 O
ATOM 6 C5' G B 452 55.691 141.952 48.830 1.00 49.32 C
ATOM 7 C4' G B 452 55.737 142.306 50.306 1.00 49.39 C
ATOM 8 O4' G B 452 55.558 141.115 51.134 1.00 50.10 O
ATOM 9 C3' G B 452 57.043 142.933 50.794 1.00 48.41 C
ATOM 10 O3' G B 452 56.697 143.803 51.867 1.00 49.50 O
ATOM 11 C2' G B 452 57.797 141.725 51.339 1.00 45.57 C
ATOM 12 O2' G B 452 58.815 142.068 52.249 1.00 45.86 O
ATOM 13 C1' G B 452 56.648 141.004 52.034 1.00 44.87 C
ATOM 14 N9 G B 452 56.828 139.605 52.404 1.00 39.33 N
ATOM 15 C8 G B 452 57.416 138.607 51.670 1.00 39.07 C
ATOM 16 N7 G B 452 57.377 137.447 52.264 1.00 37.19 N
ATOM 17 C5 G B 452 56.731 137.699 53.466 1.00 36.32 C
ATOM 18 C6 G B 452 56.381 136.823 54.521 1.00 35.91 C
ATOM 19 O6 G B 452 56.567 135.601 54.602 1.00 38.40 O
ATOM 20 N1 G B 452 55.739 137.497 55.551 1.00 32.82 N
ATOM 21 C2 G B 452 55.458 138.830 55.560 1.00 33.78 C
ATOM 22 N2 G B 452 54.826 139.286 56.640 1.00 34.95 N
ATOM 23 N3 G B 452 55.769 139.656 54.582 1.00 33.88 N
ATOM 24 C4 G B 452 56.400 139.027 53.573 1.00 36.08 C
ATOM 25 P U B 453 57.740 144.903 52.392 1.00 52.77 P
ATOM 26 OP1 U B 453 58.551 145.378 51.237 1.00 51.13 O
ATOM 27 OP2 U B 453 58.429 144.374 53.610 1.00 50.51 O
ATOM 28 O5' U B 453 56.787 146.090 52.855 1.00 48.07 O
TER
Atoms:
OP1: (51.987,129.531,55.135)
OP2: (49.580,129.839,55.988)
C3': (50.277,134.629,55.827)
C1': (52.508,135.299,55.399)
C5': (50.978,132.342,56.716)
O6: (55.083,135.484,50.020)
O4': (52.538,134.087,56.123)
C8: (53.368,133.816,53.536)
C2: (53.647,137.948,52.137)
C6: (54.473,135.945,50.986)
C5: (53.953,135.257,52.089)
C4: (53.367,135.976,53.108)
P: (50.696,130.275,55.111)
C4': (51.230,133.826,56.688)
C2': (51.096,135.875,55.506)
O2': (51.098,136.799,56.571)
N1: (54.258,137.316,51.085)
N2: (53.537,139.283,52.049)
N3: (53.181,137.314,53.199)
N7: (53.930,133.898,52.364)
N9: (53.035,135.041,54.064)
O5': (50.966,131.821,55.383)
O3': (49.107,134.929,56.585)
OP2: (49.580,129.839,55.988)
C3': (50.277,134.629,55.827)
C1': (52.508,135.299,55.399)
C5': (50.978,132.342,56.716)
O6: (55.083,135.484,50.020)
O4': (52.538,134.087,56.123)
C8: (53.368,133.816,53.536)
C2: (53.647,137.948,52.137)
C6: (54.473,135.945,50.986)
C5: (53.953,135.257,52.089)
C4: (53.367,135.976,53.108)
P: (50.696,130.275,55.111)
C4': (51.230,133.826,56.688)
C2': (51.096,135.875,55.506)
O2': (51.098,136.799,56.571)
N1: (54.258,137.316,51.085)
N2: (53.537,139.283,52.049)
N3: (53.181,137.314,53.199)
N7: (53.930,133.898,52.364)
N9: (53.035,135.041,54.064)
O5': (50.966,131.821,55.383)
O3': (49.107,134.929,56.585)
OP1: (53.460,143.495,47.657)
OP2: (52.048,141.347,47.703)
C3': (57.043,142.933,50.794)
C1': (56.648,141.004,52.034)
C5': (55.691,141.952,48.830)
O6: (56.567,135.601,54.602)
O4': (55.558,141.115,51.134)
C8: (57.416,138.607,51.670)
C2: (55.458,138.830,55.560)
C6: (56.381,136.823,54.521)
C5: (56.731,137.699,53.466)
C4: (56.400,139.027,53.573)
P: (53.113,142.198,48.295)
C4': (55.737,142.306,50.306)
C2': (57.797,141.725,51.339)
O2': (58.815,142.068,52.249)
N1: (55.739,137.497,55.551)
N2: (54.826,139.286,56.640)
N3: (55.769,139.656,54.582)
N7: (57.377,137.447,52.264)
N9: (56.828,139.605,52.404)
O5': (54.434,141.327,48.490)
O3': (56.697,143.803,51.867)
OP2: (52.048,141.347,47.703)
C3': (57.043,142.933,50.794)
C1': (56.648,141.004,52.034)
C5': (55.691,141.952,48.830)
O6: (56.567,135.601,54.602)
O4': (55.558,141.115,51.134)
C8: (57.416,138.607,51.670)
C2: (55.458,138.830,55.560)
C6: (56.381,136.823,54.521)
C5: (56.731,137.699,53.466)
C4: (56.400,139.027,53.573)
P: (53.113,142.198,48.295)
C4': (55.737,142.306,50.306)
C2': (57.797,141.725,51.339)
O2': (58.815,142.068,52.249)
N1: (55.739,137.497,55.551)
N2: (54.826,139.286,56.640)
N3: (55.769,139.656,54.582)
N7: (57.377,137.447,52.264)
N9: (56.828,139.605,52.404)
O5': (54.434,141.327,48.490)
O3': (56.697,143.803,51.867)
Image (generated by PyMOL):