ClaRNA

Doublet info:

Details

Nucleotide types: GG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1YJ9:0908:02125

Extra

PDB:
ATOM 1 O3' C A 907 68.460 96.766 75.578 1.00 37.90 O
ATOM 2 P G A 908 66.934 96.531 75.175 1.00 36.30 P
ATOM 3 OP1 G A 908 66.829 95.725 73.935 1.00 34.86 O
ATOM 4 OP2 G A 908 66.337 97.872 75.214 1.00 34.83 O
ATOM 5 O5' G A 908 66.383 95.705 76.418 1.00 37.69 O
ATOM 6 C5' G A 908 65.026 95.232 76.463 1.00 39.49 C
ATOM 7 C4' G A 908 64.690 94.713 77.844 1.00 39.83 C
ATOM 8 O4' G A 908 65.496 93.559 78.156 1.00 39.92 O
ATOM 9 C3' G A 908 65.006 95.641 79.005 1.00 40.02 C
ATOM 10 O3' G A 908 63.954 96.604 79.114 1.00 39.51 O
ATOM 11 C2' G A 908 65.040 94.679 80.204 1.00 40.69 C
ATOM 12 O2' G A 908 63.788 94.427 80.798 1.00 42.79 O
ATOM 13 C1' G A 908 65.443 93.358 79.547 1.00 40.22 C
ATOM 14 N9 G A 908 66.669 92.719 80.001 1.00 40.33 N
ATOM 15 C8 G A 908 66.769 91.436 80.474 1.00 40.03 C
ATOM 16 N7 G A 908 67.986 91.100 80.790 1.00 40.88 N
ATOM 17 C5 G A 908 68.738 92.232 80.510 1.00 41.44 C
ATOM 18 C6 G A 908 70.124 92.456 80.639 1.00 41.65 C
ATOM 19 O6 G A 908 70.996 91.668 81.016 1.00 43.46 O
ATOM 20 N1 G A 908 70.471 93.744 80.265 1.00 40.01 N
ATOM 21 C2 G A 908 69.599 94.690 79.807 1.00 40.84 C
ATOM 22 N2 G A 908 70.140 95.875 79.496 1.00 40.63 N
ATOM 23 N3 G A 908 68.295 94.491 79.662 1.00 41.03 N
ATOM 24 C4 G A 908 67.938 93.245 80.032 1.00 40.66 C
ATOM 25 P A A 909 64.255 98.072 79.685 1.00 39.88 P
ATOM 26 OP1 A A 909 63.347 99.025 79.010 1.00 36.86 O
ATOM 27 OP2 A A 909 65.732 98.315 79.694 1.00 41.90 O
ATOM 28 O5' A A 909 63.833 98.007 81.212 1.00 41.85 O
TER

ATOM 1 O3' U B2124 79.750 99.660 79.880 1.00 38.10 O
ATOM 2 P G B2125 78.866 99.989 81.190 1.00 40.80 P
ATOM 3 OP1 G B2125 78.493 101.421 81.226 1.00 39.81 O
ATOM 4 OP2 G B2125 79.546 99.378 82.360 1.00 40.92 O
ATOM 5 O5' G B2125 77.515 99.184 80.941 1.00 43.59 O
ATOM 6 C5' G B2125 76.641 99.538 79.854 1.00 41.42 C
ATOM 7 C4' G B2125 75.560 98.504 79.689 1.00 39.72 C
ATOM 8 O4' G B2125 76.156 97.235 79.331 1.00 39.17 O
ATOM 9 C3' G B2125 74.736 98.170 80.918 1.00 39.75 C
ATOM 10 O3' G B2125 73.733 99.136 81.173 1.00 39.89 O
ATOM 11 C2' G B2125 74.149 96.827 80.522 1.00 40.32 C
ATOM 12 O2' G B2125 73.105 96.947 79.573 1.00 36.62 O
ATOM 13 C1' G B2125 75.359 96.180 79.843 1.00 42.60 C
ATOM 14 N9 G B2125 76.168 95.418 80.786 1.00 45.95 N
ATOM 15 C8 G B2125 77.391 95.774 81.289 1.00 46.96 C
ATOM 16 N7 G B2125 77.872 94.901 82.132 1.00 49.94 N
ATOM 17 C5 G B2125 76.909 93.905 82.189 1.00 48.58 C
ATOM 18 C6 G B2125 76.883 92.709 82.931 1.00 49.12 C
ATOM 19 O6 G B2125 77.732 92.273 83.698 1.00 51.36 O
ATOM 20 N1 G B2125 75.720 91.987 82.705 1.00 50.03 N
ATOM 21 C2 G B2125 74.710 92.364 81.864 1.00 49.15 C
ATOM 22 N2 G B2125 73.676 91.526 81.787 1.00 48.15 N
ATOM 23 N3 G B2125 74.720 93.481 81.153 1.00 48.99 N
ATOM 24 C4 G B2125 75.848 94.202 81.365 1.00 49.01 C
ATOM 25 P A B2126 73.229 99.378 82.677 1.00 43.36 P
ATOM 26 OP1 A B2126 72.177 100.429 82.595 1.00 43.01 O
ATOM 27 OP2 A B2126 74.384 99.564 83.583 1.00 41.91 O
ATOM 28 O5' A B2126 72.531 98.010 83.078 1.00 42.99 O
TER

Atoms:
OP1: (66.829,95.725,73.935)
OP2: (66.337,97.872,75.214)
C3': (65.006,95.641,79.005)
C1': (65.443,93.358,79.547)
C5': (65.026,95.232,76.463)
O6: (70.996,91.668,81.016)
O4': (65.496,93.559,78.156)
C8: (66.769,91.436,80.474)
C2: (69.599,94.690,79.807)
C6: (70.124,92.456,80.639)
C5: (68.738,92.232,80.510)
C4: (67.938,93.245,80.032)
P: (66.934,96.531,75.175)
C4': (64.690,94.713,77.844)
C2': (65.040,94.679,80.204)
O2': (63.788,94.427,80.798)
N1: (70.471,93.744,80.265)
N2: (70.140,95.875,79.496)
N3: (68.295,94.491,79.662)
N7: (67.986,91.100,80.790)
N9: (66.669,92.719,80.001)
O5': (66.383,95.705,76.418)
O3': (63.954,96.604,79.114)
OP1: (78.493,101.421,81.226)
OP2: (79.546,99.378,82.360)
C3': (74.736,98.170,80.918)
C1': (75.359,96.180,79.843)
C5': (76.641,99.538,79.854)
O6: (77.732,92.273,83.698)
O4': (76.156,97.235,79.331)
C8: (77.391,95.774,81.289)
C2: (74.710,92.364,81.864)
C6: (76.883,92.709,82.931)
C5: (76.909,93.905,82.189)
C4: (75.848,94.202,81.365)
P: (78.866,99.989,81.190)
C4': (75.560,98.504,79.689)
C2': (74.149,96.827,80.522)
O2': (73.105,96.947,79.573)
N1: (75.720,91.987,82.705)
N2: (73.676,91.526,81.787)
N3: (74.720,93.481,81.153)
N7: (77.872,94.901,82.132)
N9: (76.168,95.418,80.786)
O5': (77.515,99.184,80.941)
O3': (73.733,99.136,81.173)
Image (generated by PyMOL):
PyMOL image
show in jmol