Doublet info:
Details
Nucleotide types:
GG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJW:0234:0252
Extra
PDB:
ATOM 1 O3' C A 233 92.394 111.985 -9.665 1.00 50.48 O
ATOM 2 P G A 234 93.884 112.575 -9.678 1.00 52.94 P
ATOM 3 OP1 G A 234 94.205 113.031 -11.066 1.00 53.20 O
ATOM 4 OP2 G A 234 94.753 111.560 -9.011 1.00 48.86 O
ATOM 5 O5' G A 234 93.752 113.856 -8.747 1.00 50.43 O
ATOM 6 C5' G A 234 92.602 114.712 -8.856 1.00 51.03 C
ATOM 7 C4' G A 234 92.736 115.881 -7.922 1.00 52.12 C
ATOM 8 O4' G A 234 92.573 115.416 -6.553 1.00 54.07 O
ATOM 9 C3' G A 234 94.085 116.586 -7.983 1.00 52.33 C
ATOM 10 O3' G A 234 93.913 117.988 -7.831 1.00 51.81 O
ATOM 11 C2' G A 234 94.845 115.964 -6.814 1.00 52.26 C
ATOM 12 O2' G A 234 95.855 116.801 -6.287 1.00 51.55 O
ATOM 13 C1' G A 234 93.725 115.734 -5.800 1.00 52.42 C
ATOM 14 N9 G A 234 93.993 114.630 -4.882 1.00 51.97 N
ATOM 15 C8 G A 234 94.552 113.410 -5.188 1.00 51.94 C
ATOM 16 N7 G A 234 94.723 112.647 -4.143 1.00 53.13 N
ATOM 17 C5 G A 234 94.237 113.402 -3.082 1.00 53.83 C
ATOM 18 C6 G A 234 94.172 113.105 -1.694 1.00 53.28 C
ATOM 19 O6 G A 234 94.555 112.093 -1.105 1.00 53.98 O
ATOM 20 N1 G A 234 93.593 114.142 -0.976 1.00 53.46 N
ATOM 21 C2 G A 234 93.135 115.317 -1.514 1.00 53.55 C
ATOM 22 N2 G A 234 92.592 116.189 -0.646 1.00 53.48 N
ATOM 23 N3 G A 234 93.200 115.616 -2.804 1.00 53.09 N
ATOM 24 C4 G A 234 93.761 114.620 -3.524 1.00 53.02 C
ATOM 25 P A A 235 94.414 118.971 -8.996 1.00 50.74 P
ATOM 26 OP1 A A 235 93.911 118.443 -10.290 1.00 51.37 O
ATOM 27 OP2 A A 235 95.872 119.191 -8.808 1.00 49.45 O
ATOM 28 O5' A A 235 93.648 120.329 -8.704 1.00 48.22 O
TER
ATOM 1 O3' U B 251 96.604 118.697 6.843 1.00 38.52 O
ATOM 2 P G B 252 95.277 118.048 6.219 1.00 39.06 P
ATOM 3 OP1 G B 252 94.137 118.533 7.023 1.00 41.57 O
ATOM 4 OP2 G B 252 95.477 116.595 6.033 1.00 39.47 O
ATOM 5 O5' G B 252 95.171 118.706 4.780 1.00 40.75 O
ATOM 6 C5' G B 252 94.664 120.035 4.621 1.00 43.65 C
ATOM 7 C4' G B 252 93.591 120.045 3.572 1.00 43.73 C
ATOM 8 O4' G B 252 94.181 119.733 2.282 1.00 43.84 O
ATOM 9 C3' G B 252 92.486 119.026 3.795 1.00 43.74 C
ATOM 10 O3' G B 252 91.249 119.535 3.361 1.00 45.66 O
ATOM 11 C2' G B 252 92.944 117.819 2.981 1.00 44.14 C
ATOM 12 O2' G B 252 91.882 117.045 2.463 1.00 42.87 O
ATOM 13 C1' G B 252 93.754 118.452 1.848 1.00 44.51 C
ATOM 14 N9 G B 252 94.940 117.645 1.546 1.00 44.87 N
ATOM 15 C8 G B 252 95.748 116.996 2.453 1.00 43.75 C
ATOM 16 N7 G B 252 96.694 116.295 1.892 1.00 44.44 N
ATOM 17 C5 G B 252 96.515 116.498 0.529 1.00 45.88 C
ATOM 18 C6 G B 252 97.237 115.969 -0.595 1.00 45.66 C
ATOM 19 O6 G B 252 98.187 115.167 -0.606 1.00 43.31 O
ATOM 20 N1 G B 252 96.734 116.459 -1.797 1.00 45.13 N
ATOM 21 C2 G B 252 95.674 117.327 -1.917 1.00 45.61 C
ATOM 22 N2 G B 252 95.356 117.694 -3.163 1.00 45.31 N
ATOM 23 N3 G B 252 94.980 117.803 -0.890 1.00 46.07 N
ATOM 24 C4 G B 252 95.452 117.351 0.296 1.00 45.95 C
ATOM 25 P U B 253 89.977 119.415 4.327 1.00 46.37 P
ATOM 26 OP1 U B 253 90.374 119.954 5.645 1.00 47.12 O
ATOM 27 OP2 U B 253 89.456 118.035 4.237 1.00 48.16 O
ATOM 28 O5' U B 253 88.905 120.382 3.661 1.00 45.57 O
TER
ATOM 2 P G A 234 93.884 112.575 -9.678 1.00 52.94 P
ATOM 3 OP1 G A 234 94.205 113.031 -11.066 1.00 53.20 O
ATOM 4 OP2 G A 234 94.753 111.560 -9.011 1.00 48.86 O
ATOM 5 O5' G A 234 93.752 113.856 -8.747 1.00 50.43 O
ATOM 6 C5' G A 234 92.602 114.712 -8.856 1.00 51.03 C
ATOM 7 C4' G A 234 92.736 115.881 -7.922 1.00 52.12 C
ATOM 8 O4' G A 234 92.573 115.416 -6.553 1.00 54.07 O
ATOM 9 C3' G A 234 94.085 116.586 -7.983 1.00 52.33 C
ATOM 10 O3' G A 234 93.913 117.988 -7.831 1.00 51.81 O
ATOM 11 C2' G A 234 94.845 115.964 -6.814 1.00 52.26 C
ATOM 12 O2' G A 234 95.855 116.801 -6.287 1.00 51.55 O
ATOM 13 C1' G A 234 93.725 115.734 -5.800 1.00 52.42 C
ATOM 14 N9 G A 234 93.993 114.630 -4.882 1.00 51.97 N
ATOM 15 C8 G A 234 94.552 113.410 -5.188 1.00 51.94 C
ATOM 16 N7 G A 234 94.723 112.647 -4.143 1.00 53.13 N
ATOM 17 C5 G A 234 94.237 113.402 -3.082 1.00 53.83 C
ATOM 18 C6 G A 234 94.172 113.105 -1.694 1.00 53.28 C
ATOM 19 O6 G A 234 94.555 112.093 -1.105 1.00 53.98 O
ATOM 20 N1 G A 234 93.593 114.142 -0.976 1.00 53.46 N
ATOM 21 C2 G A 234 93.135 115.317 -1.514 1.00 53.55 C
ATOM 22 N2 G A 234 92.592 116.189 -0.646 1.00 53.48 N
ATOM 23 N3 G A 234 93.200 115.616 -2.804 1.00 53.09 N
ATOM 24 C4 G A 234 93.761 114.620 -3.524 1.00 53.02 C
ATOM 25 P A A 235 94.414 118.971 -8.996 1.00 50.74 P
ATOM 26 OP1 A A 235 93.911 118.443 -10.290 1.00 51.37 O
ATOM 27 OP2 A A 235 95.872 119.191 -8.808 1.00 49.45 O
ATOM 28 O5' A A 235 93.648 120.329 -8.704 1.00 48.22 O
TER
ATOM 1 O3' U B 251 96.604 118.697 6.843 1.00 38.52 O
ATOM 2 P G B 252 95.277 118.048 6.219 1.00 39.06 P
ATOM 3 OP1 G B 252 94.137 118.533 7.023 1.00 41.57 O
ATOM 4 OP2 G B 252 95.477 116.595 6.033 1.00 39.47 O
ATOM 5 O5' G B 252 95.171 118.706 4.780 1.00 40.75 O
ATOM 6 C5' G B 252 94.664 120.035 4.621 1.00 43.65 C
ATOM 7 C4' G B 252 93.591 120.045 3.572 1.00 43.73 C
ATOM 8 O4' G B 252 94.181 119.733 2.282 1.00 43.84 O
ATOM 9 C3' G B 252 92.486 119.026 3.795 1.00 43.74 C
ATOM 10 O3' G B 252 91.249 119.535 3.361 1.00 45.66 O
ATOM 11 C2' G B 252 92.944 117.819 2.981 1.00 44.14 C
ATOM 12 O2' G B 252 91.882 117.045 2.463 1.00 42.87 O
ATOM 13 C1' G B 252 93.754 118.452 1.848 1.00 44.51 C
ATOM 14 N9 G B 252 94.940 117.645 1.546 1.00 44.87 N
ATOM 15 C8 G B 252 95.748 116.996 2.453 1.00 43.75 C
ATOM 16 N7 G B 252 96.694 116.295 1.892 1.00 44.44 N
ATOM 17 C5 G B 252 96.515 116.498 0.529 1.00 45.88 C
ATOM 18 C6 G B 252 97.237 115.969 -0.595 1.00 45.66 C
ATOM 19 O6 G B 252 98.187 115.167 -0.606 1.00 43.31 O
ATOM 20 N1 G B 252 96.734 116.459 -1.797 1.00 45.13 N
ATOM 21 C2 G B 252 95.674 117.327 -1.917 1.00 45.61 C
ATOM 22 N2 G B 252 95.356 117.694 -3.163 1.00 45.31 N
ATOM 23 N3 G B 252 94.980 117.803 -0.890 1.00 46.07 N
ATOM 24 C4 G B 252 95.452 117.351 0.296 1.00 45.95 C
ATOM 25 P U B 253 89.977 119.415 4.327 1.00 46.37 P
ATOM 26 OP1 U B 253 90.374 119.954 5.645 1.00 47.12 O
ATOM 27 OP2 U B 253 89.456 118.035 4.237 1.00 48.16 O
ATOM 28 O5' U B 253 88.905 120.382 3.661 1.00 45.57 O
TER
Atoms:
OP1: (94.205,113.031,-11.066)
OP2: (94.753,111.560,-9.011)
C3': (94.085,116.586,-7.983)
C1': (93.725,115.734,-5.800)
C5': (92.602,114.712,-8.856)
O6: (94.555,112.093,-1.105)
O4': (92.573,115.416,-6.553)
C8: (94.552,113.410,-5.188)
C2: (93.135,115.317,-1.514)
C6: (94.172,113.105,-1.694)
C5: (94.237,113.402,-3.082)
C4: (93.761,114.620,-3.524)
P: (93.884,112.575,-9.678)
C4': (92.736,115.881,-7.922)
C2': (94.845,115.964,-6.814)
O2': (95.855,116.801,-6.287)
N1: (93.593,114.142,-0.976)
N2: (92.592,116.189,-0.646)
N3: (93.200,115.616,-2.804)
N7: (94.723,112.647,-4.143)
N9: (93.993,114.630,-4.882)
O5': (93.752,113.856,-8.747)
O3': (93.913,117.988,-7.831)
OP2: (94.753,111.560,-9.011)
C3': (94.085,116.586,-7.983)
C1': (93.725,115.734,-5.800)
C5': (92.602,114.712,-8.856)
O6: (94.555,112.093,-1.105)
O4': (92.573,115.416,-6.553)
C8: (94.552,113.410,-5.188)
C2: (93.135,115.317,-1.514)
C6: (94.172,113.105,-1.694)
C5: (94.237,113.402,-3.082)
C4: (93.761,114.620,-3.524)
P: (93.884,112.575,-9.678)
C4': (92.736,115.881,-7.922)
C2': (94.845,115.964,-6.814)
O2': (95.855,116.801,-6.287)
N1: (93.593,114.142,-0.976)
N2: (92.592,116.189,-0.646)
N3: (93.200,115.616,-2.804)
N7: (94.723,112.647,-4.143)
N9: (93.993,114.630,-4.882)
O5': (93.752,113.856,-8.747)
O3': (93.913,117.988,-7.831)
OP1: (94.137,118.533,7.023)
OP2: (95.477,116.595,6.033)
C3': (92.486,119.026,3.795)
C1': (93.754,118.452,1.848)
C5': (94.664,120.035,4.621)
O6: (98.187,115.167,-0.606)
O4': (94.181,119.733,2.282)
C8: (95.748,116.996,2.453)
C2: (95.674,117.327,-1.917)
C6: (97.237,115.969,-0.595)
C5: (96.515,116.498,0.529)
C4: (95.452,117.351,0.296)
P: (95.277,118.048,6.219)
C4': (93.591,120.045,3.572)
C2': (92.944,117.819,2.981)
O2': (91.882,117.045,2.463)
N1: (96.734,116.459,-1.797)
N2: (95.356,117.694,-3.163)
N3: (94.980,117.803,-0.890)
N7: (96.694,116.295,1.892)
N9: (94.940,117.645,1.546)
O5': (95.171,118.706,4.780)
O3': (91.249,119.535,3.361)
OP2: (95.477,116.595,6.033)
C3': (92.486,119.026,3.795)
C1': (93.754,118.452,1.848)
C5': (94.664,120.035,4.621)
O6: (98.187,115.167,-0.606)
O4': (94.181,119.733,2.282)
C8: (95.748,116.996,2.453)
C2: (95.674,117.327,-1.917)
C6: (97.237,115.969,-0.595)
C5: (96.515,116.498,0.529)
C4: (95.452,117.351,0.296)
P: (95.277,118.048,6.219)
C4': (93.591,120.045,3.572)
C2': (92.944,117.819,2.981)
O2': (91.882,117.045,2.463)
N1: (96.734,116.459,-1.797)
N2: (95.356,117.694,-3.163)
N3: (94.980,117.803,-0.890)
N7: (96.694,116.295,1.892)
N9: (94.940,117.645,1.546)
O5': (95.171,118.706,4.780)
O3': (91.249,119.535,3.361)
Image (generated by PyMOL):