ClaRNA

Doublet info:

Details

Nucleotide types: GG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 2J02:A418:A403

Extra

PDB:
ATOM 1 O3' U A 417 -113.234 36.024 -66.824 1.00 7.98 O
ATOM 2 P G A 418 -112.663 36.040 -68.323 1.00 42.48 P
ATOM 3 OP1 G A 418 -113.193 34.820 -69.008 1.00 35.39 O
ATOM 4 OP2 G A 418 -111.195 36.290 -68.297 1.00 35.85 O
ATOM 5 O5' G A 418 -113.358 37.318 -68.959 1.00 48.89 O
ATOM 6 C5' G A 418 -112.679 38.095 -69.946 1.00 49.68 C
ATOM 7 C4' G A 418 -113.504 39.298 -70.310 1.00 50.34 C
ATOM 8 O4' G A 418 -114.689 38.878 -71.043 1.00 50.44 O
ATOM 9 C3' G A 418 -113.983 40.137 -69.136 1.00 50.25 C
ATOM 10 O3' G A 418 -113.460 41.484 -69.144 1.00 49.95 O
ATOM 11 C2' G A 418 -115.473 39.811 -69.004 1.00 50.00 C
ATOM 12 O2' G A 418 -116.280 40.849 -68.478 1.00 49.60 O
ATOM 13 C1' G A 418 -115.861 39.376 -70.422 1.00 50.46 C
ATOM 14 N9 G A 418 -116.827 38.279 -70.396 1.00 39.51 N
ATOM 15 C8 G A 418 -116.541 36.959 -70.145 1.00 39.68 C
ATOM 16 N7 G A 418 -117.598 36.195 -70.143 1.00 40.01 N
ATOM 17 C5 G A 418 -118.651 37.057 -70.415 1.00 40.50 C
ATOM 18 C6 G A 418 -120.047 36.800 -70.524 1.00 40.44 C
ATOM 19 O6 G A 418 -120.647 35.731 -70.374 1.00 40.25 O
ATOM 20 N1 G A 418 -120.761 37.952 -70.827 1.00 40.95 N
ATOM 21 C2 G A 418 -120.216 39.192 -70.990 1.00 41.66 C
ATOM 22 N2 G A 418 -121.086 40.173 -71.280 1.00 42.45 N
ATOM 23 N3 G A 418 -118.915 39.455 -70.878 1.00 41.33 N
ATOM 24 C4 G A 418 -118.196 38.346 -70.592 1.00 40.46 C
ATOM 25 P U A 419 -113.975 42.593 -70.201 1.00 33.69 P
ATOM 26 OP1 U A 419 -112.939 43.644 -70.120 1.00 36.67 O
ATOM 27 OP2 U A 419 -115.386 42.949 -69.937 1.00 37.09 O
ATOM 28 O5' U A 419 -113.848 41.901 -71.630 1.00 26.44 O
TER

ATOM 1 O3' A B 402 -124.885 46.951 -73.408 1.00157.33 O
ATOM 2 P G B 403 -126.282 46.254 -73.063 1.00106.96 P
ATOM 3 OP1 G B 403 -127.204 46.445 -74.219 1.00 79.07 O
ATOM 4 OP2 G B 403 -126.682 46.736 -71.715 1.00 77.42 O
ATOM 5 O5' G B 403 -125.886 44.714 -72.946 1.00 84.21 O
ATOM 6 C5' G B 403 -125.514 43.949 -74.115 1.00 82.07 C
ATOM 7 C4' G B 403 -124.401 42.969 -73.791 1.00 80.53 C
ATOM 8 O4' G B 403 -123.094 43.599 -73.890 1.00 79.69 O
ATOM 9 C3' G B 403 -124.459 42.293 -72.424 1.00 79.77 C
ATOM 10 O3' G B 403 -124.082 40.932 -72.555 1.00 78.87 O
ATOM 11 C2' G B 403 -123.370 43.019 -71.641 1.00 79.46 C
ATOM 12 O2' G B 403 -122.794 42.234 -70.619 1.00 79.56 O
ATOM 13 C1' G B 403 -122.345 43.291 -72.737 1.00 79.16 C
ATOM 14 N9 G B 403 -121.419 44.381 -72.451 1.00 68.34 N
ATOM 15 C8 G B 403 -121.633 45.730 -72.587 1.00 68.76 C
ATOM 16 N7 G B 403 -120.591 46.449 -72.265 1.00 68.12 N
ATOM 17 C5 G B 403 -119.634 45.518 -71.887 1.00 67.97 C
ATOM 18 C6 G B 403 -118.291 45.696 -71.441 1.00 67.39 C
ATOM 19 O6 G B 403 -117.660 46.746 -71.279 1.00 68.17 O
ATOM 20 N1 G B 403 -117.678 44.480 -71.171 1.00 66.57 N
ATOM 21 C2 G B 403 -118.275 43.253 -71.302 1.00 66.45 C
ATOM 22 N2 G B 403 -117.525 42.196 -70.981 1.00 66.66 N
ATOM 23 N3 G B 403 -119.518 43.073 -71.716 1.00 67.61 N
ATOM 24 C4 G B 403 -120.133 44.239 -71.990 1.00 68.15 C
ATOM 25 P A B 404 -124.723 39.830 -71.582 1.00 56.01 P
ATOM 26 OP1 A B 404 -125.482 40.514 -70.499 1.00 77.11 O
ATOM 27 OP2 A B 404 -123.636 38.879 -71.231 1.00 77.75 O
ATOM 28 O5' A B 404 -125.767 39.075 -72.514 1.00 40.80 O
TER

Atoms:
OP1: (-113.193,34.820,-69.008)
OP2: (-111.195,36.290,-68.297)
C3': (-113.983,40.137,-69.136)
C1': (-115.861,39.376,-70.422)
C5': (-112.679,38.095,-69.946)
O6: (-120.647,35.731,-70.374)
O4': (-114.689,38.878,-71.043)
C8: (-116.541,36.959,-70.145)
C2: (-120.216,39.192,-70.990)
C6: (-120.047,36.800,-70.524)
C5: (-118.651,37.057,-70.415)
C4: (-118.196,38.346,-70.592)
P: (-112.663,36.040,-68.323)
C4': (-113.504,39.298,-70.310)
C2': (-115.473,39.811,-69.004)
O2': (-116.280,40.849,-68.478)
N1: (-120.761,37.952,-70.827)
N2: (-121.086,40.173,-71.280)
N3: (-118.915,39.455,-70.878)
N7: (-117.598,36.195,-70.143)
N9: (-116.827,38.279,-70.396)
O5': (-113.358,37.318,-68.959)
O3': (-113.460,41.484,-69.144)
OP1: (-127.204,46.445,-74.219)
OP2: (-126.682,46.736,-71.715)
C3': (-124.459,42.293,-72.424)
C1': (-122.345,43.291,-72.737)
C5': (-125.514,43.949,-74.115)
O6: (-117.660,46.746,-71.279)
O4': (-123.094,43.599,-73.890)
C8: (-121.633,45.730,-72.587)
C2: (-118.275,43.253,-71.302)
C6: (-118.291,45.696,-71.441)
C5: (-119.634,45.518,-71.887)
C4: (-120.133,44.239,-71.990)
P: (-126.282,46.254,-73.063)
C4': (-124.401,42.969,-73.791)
C2': (-123.370,43.019,-71.641)
O2': (-122.794,42.234,-70.619)
N1: (-117.678,44.480,-71.171)
N2: (-117.525,42.196,-70.981)
N3: (-119.518,43.073,-71.716)
N7: (-120.591,46.449,-72.265)
N9: (-121.419,44.381,-72.451)
O5': (-125.886,44.714,-72.946)
O3': (-124.082,40.932,-72.555)
Image (generated by PyMOL):
PyMOL image
show in jmol