ClaRNA

Doublet info:

Details

Nucleotide types: GG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3CCE:0234:0252

Extra

PDB:
ATOM 1 O3' C A 233 92.283 111.597 -9.604 1.00 52.12 O
ATOM 2 P G A 234 93.768 112.187 -9.634 1.00 53.74 P
ATOM 3 OP1 G A 234 94.088 112.534 -11.050 1.00 55.85 O
ATOM 4 OP2 G A 234 94.639 111.248 -8.893 1.00 52.06 O
ATOM 5 O5' G A 234 93.620 113.528 -8.796 1.00 52.19 O
ATOM 6 C5' G A 234 92.482 114.385 -9.003 1.00 51.92 C
ATOM 7 C4' G A 234 92.530 115.546 -8.051 1.00 52.56 C
ATOM 8 O4' G A 234 92.287 115.058 -6.703 1.00 54.42 O
ATOM 9 C3' G A 234 93.876 116.256 -8.013 1.00 52.32 C
ATOM 10 O3' G A 234 93.686 117.648 -7.807 1.00 52.69 O
ATOM 11 C2' G A 234 94.569 115.588 -6.831 1.00 52.31 C
ATOM 12 O2' G A 234 95.560 116.388 -6.226 1.00 51.98 O
ATOM 13 C1' G A 234 93.397 115.354 -5.883 1.00 53.64 C
ATOM 14 N9 G A 234 93.619 114.233 -4.974 1.00 54.16 N
ATOM 15 C8 G A 234 94.053 112.968 -5.296 1.00 54.32 C
ATOM 16 N7 G A 234 94.230 112.204 -4.251 1.00 54.38 N
ATOM 17 C5 G A 234 93.877 113.010 -3.175 1.00 55.29 C
ATOM 18 C6 G A 234 93.885 112.743 -1.779 1.00 55.17 C
ATOM 19 O6 G A 234 94.220 111.709 -1.191 1.00 54.04 O
ATOM 20 N1 G A 234 93.446 113.841 -1.049 1.00 55.76 N
ATOM 21 C2 G A 234 93.048 115.041 -1.585 1.00 55.51 C
ATOM 22 N2 G A 234 92.634 115.971 -0.715 1.00 56.88 N
ATOM 23 N3 G A 234 93.049 115.308 -2.878 1.00 55.22 N
ATOM 24 C4 G A 234 93.474 114.256 -3.609 1.00 54.99 C
ATOM 25 P A A 235 94.189 118.685 -8.930 1.00 52.75 P
ATOM 26 OP1 A A 235 93.706 118.156 -10.231 1.00 52.31 O
ATOM 27 OP2 A A 235 95.639 118.933 -8.731 1.00 51.92 O
ATOM 28 O5' A A 235 93.394 120.028 -8.615 1.00 50.28 O
TER

ATOM 1 O3' U B 251 96.431 118.375 6.760 1.00 39.53 O
ATOM 2 P G B 252 95.135 117.631 6.176 1.00 39.96 P
ATOM 3 OP1 G B 252 93.943 118.030 6.952 1.00 39.34 O
ATOM 4 OP2 G B 252 95.456 116.195 6.017 1.00 40.05 O
ATOM 5 O5' G B 252 94.993 118.261 4.729 1.00 40.83 O
ATOM 6 C5' G B 252 94.618 119.630 4.565 1.00 42.40 C
ATOM 7 C4' G B 252 93.522 119.724 3.546 1.00 41.97 C
ATOM 8 O4' G B 252 94.045 119.382 2.236 1.00 43.14 O
ATOM 9 C3' G B 252 92.392 118.748 3.803 1.00 41.86 C
ATOM 10 O3' G B 252 91.176 119.266 3.326 1.00 42.08 O
ATOM 11 C2' G B 252 92.837 117.505 3.041 1.00 42.63 C
ATOM 12 O2' G B 252 91.777 116.678 2.605 1.00 42.36 O
ATOM 13 C1' G B 252 93.591 118.097 1.853 1.00 42.30 C
ATOM 14 N9 G B 252 94.754 117.272 1.536 1.00 43.42 N
ATOM 15 C8 G B 252 95.520 116.558 2.425 1.00 43.11 C
ATOM 16 N7 G B 252 96.457 115.857 1.850 1.00 43.25 N
ATOM 17 C5 G B 252 96.312 116.134 0.497 1.00 45.34 C
ATOM 18 C6 G B 252 97.035 115.642 -0.630 1.00 46.89 C
ATOM 19 O6 G B 252 97.971 114.822 -0.655 1.00 46.78 O
ATOM 20 N1 G B 252 96.560 116.192 -1.819 1.00 46.42 N
ATOM 21 C2 G B 252 95.520 117.086 -1.918 1.00 46.10 C
ATOM 22 N2 G B 252 95.208 117.501 -3.157 1.00 46.16 N
ATOM 23 N3 G B 252 94.833 117.540 -0.881 1.00 45.86 N
ATOM 24 C4 G B 252 95.279 117.024 0.288 1.00 45.06 C
ATOM 25 P U B 253 89.846 119.029 4.178 1.00 42.24 P
ATOM 26 OP1 U B 253 90.152 119.478 5.555 1.00 40.33 O
ATOM 27 OP2 U B 253 89.375 117.645 3.939 1.00 41.05 O
ATOM 28 O5' U B 253 88.783 120.011 3.514 1.00 44.56 O
TER

Atoms:
OP1: (94.088,112.534,-11.050)
OP2: (94.639,111.248,-8.893)
C3': (93.876,116.256,-8.013)
C1': (93.397,115.354,-5.883)
C5': (92.482,114.385,-9.003)
O6: (94.220,111.709,-1.191)
O4': (92.287,115.058,-6.703)
C8: (94.053,112.968,-5.296)
C2: (93.048,115.041,-1.585)
C6: (93.885,112.743,-1.779)
C5: (93.877,113.010,-3.175)
C4: (93.474,114.256,-3.609)
P: (93.768,112.187,-9.634)
C4': (92.530,115.546,-8.051)
C2': (94.569,115.588,-6.831)
O2': (95.560,116.388,-6.226)
N1: (93.446,113.841,-1.049)
N2: (92.634,115.971,-0.715)
N3: (93.049,115.308,-2.878)
N7: (94.230,112.204,-4.251)
N9: (93.619,114.233,-4.974)
O5': (93.620,113.528,-8.796)
O3': (93.686,117.648,-7.807)
OP1: (93.943,118.030,6.952)
OP2: (95.456,116.195,6.017)
C3': (92.392,118.748,3.803)
C1': (93.591,118.097,1.853)
C5': (94.618,119.630,4.565)
O6: (97.971,114.822,-0.655)
O4': (94.045,119.382,2.236)
C8: (95.520,116.558,2.425)
C2: (95.520,117.086,-1.918)
C6: (97.035,115.642,-0.630)
C5: (96.312,116.134,0.497)
C4: (95.279,117.024,0.288)
P: (95.135,117.631,6.176)
C4': (93.522,119.724,3.546)
C2': (92.837,117.505,3.041)
O2': (91.777,116.678,2.605)
N1: (96.560,116.192,-1.819)
N2: (95.208,117.501,-3.157)
N3: (94.833,117.540,-0.881)
N7: (96.457,115.857,1.850)
N9: (94.754,117.272,1.536)
O5': (94.993,118.261,4.729)
O3': (91.176,119.266,3.326)
Image (generated by PyMOL):
PyMOL image
show in jmol