Doublet info:
Details
Nucleotide types:
GG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3CD6:0234:0252
Extra
PDB:
ATOM 1 O3' C A 233 92.424 111.968 -9.411 1.00 65.37 O
ATOM 2 P G A 234 93.902 112.578 -9.441 1.00 66.62 P
ATOM 3 OP1 G A 234 94.213 112.911 -10.858 1.00 67.99 O
ATOM 4 OP2 G A 234 94.794 111.660 -8.689 1.00 64.86 O
ATOM 5 O5' G A 234 93.737 113.929 -8.619 1.00 65.46 O
ATOM 6 C5' G A 234 92.614 114.800 -8.859 1.00 64.24 C
ATOM 7 C4' G A 234 92.673 115.986 -7.931 1.00 64.05 C
ATOM 8 O4' G A 234 92.424 115.540 -6.570 1.00 64.09 O
ATOM 9 C3' G A 234 94.016 116.708 -7.905 1.00 63.60 C
ATOM 10 O3' G A 234 93.814 118.095 -7.708 1.00 64.79 O
ATOM 11 C2' G A 234 94.702 116.091 -6.695 1.00 63.12 C
ATOM 12 O2' G A 234 95.682 116.925 -6.117 1.00 63.37 O
ATOM 13 C1' G A 234 93.521 115.884 -5.751 1.00 63.88 C
ATOM 14 N9 G A 234 93.748 114.803 -4.796 1.00 65.09 N
ATOM 15 C8 G A 234 94.303 113.571 -5.054 1.00 64.86 C
ATOM 16 N7 G A 234 94.457 112.843 -3.983 1.00 65.69 N
ATOM 17 C5 G A 234 93.957 113.634 -2.956 1.00 66.71 C
ATOM 18 C6 G A 234 93.875 113.385 -1.561 1.00 66.96 C
ATOM 19 O6 G A 234 94.244 112.388 -0.932 1.00 66.73 O
ATOM 20 N1 G A 234 93.292 114.451 -0.886 1.00 67.00 N
ATOM 21 C2 G A 234 92.843 115.607 -1.472 1.00 66.58 C
ATOM 22 N2 G A 234 92.304 116.509 -0.643 1.00 66.83 N
ATOM 23 N3 G A 234 92.918 115.857 -2.770 1.00 66.15 N
ATOM 24 C4 G A 234 93.488 114.836 -3.447 1.00 65.95 C
ATOM 25 P A A 235 94.246 119.126 -8.859 1.00 64.86 P
ATOM 26 OP1 A A 235 93.717 118.588 -10.140 1.00 66.68 O
ATOM 27 OP2 A A 235 95.694 119.409 -8.724 1.00 64.12 O
ATOM 28 O5' A A 235 93.421 120.442 -8.519 1.00 63.20 O
TER
ATOM 1 O3' U B 251 96.602 119.045 7.008 1.00 50.99 O
ATOM 2 P G B 252 95.340 118.240 6.443 1.00 50.67 P
ATOM 3 OP1 G B 252 94.145 118.573 7.250 1.00 51.07 O
ATOM 4 OP2 G B 252 95.745 116.828 6.278 1.00 49.66 O
ATOM 5 O5' G B 252 95.136 118.858 4.999 1.00 51.50 O
ATOM 6 C5' G B 252 94.632 120.183 4.836 1.00 50.76 C
ATOM 7 C4' G B 252 93.584 120.184 3.763 1.00 50.12 C
ATOM 8 O4' G B 252 94.217 119.826 2.507 1.00 49.95 O
ATOM 9 C3' G B 252 92.477 119.166 3.989 1.00 49.84 C
ATOM 10 O3' G B 252 91.243 119.642 3.494 1.00 50.13 O
ATOM 11 C2' G B 252 92.980 117.935 3.243 1.00 51.11 C
ATOM 12 O2' G B 252 91.955 117.076 2.776 1.00 49.30 O
ATOM 13 C1' G B 252 93.773 118.549 2.085 1.00 50.88 C
ATOM 14 N9 G B 252 94.953 117.743 1.769 1.00 50.30 N
ATOM 15 C8 G B 252 95.776 117.108 2.668 1.00 49.66 C
ATOM 16 N7 G B 252 96.721 116.416 2.100 1.00 49.97 N
ATOM 17 C5 G B 252 96.523 116.609 0.742 1.00 51.02 C
ATOM 18 C6 G B 252 97.230 116.087 -0.368 1.00 52.32 C
ATOM 19 O6 G B 252 98.197 115.306 -0.370 1.00 52.43 O
ATOM 20 N1 G B 252 96.704 116.551 -1.572 1.00 52.18 N
ATOM 21 C2 G B 252 95.633 117.398 -1.694 1.00 50.32 C
ATOM 22 N2 G B 252 95.291 117.739 -2.942 1.00 48.71 N
ATOM 23 N3 G B 252 94.951 117.877 -0.666 1.00 51.02 N
ATOM 24 C4 G B 252 95.447 117.443 0.517 1.00 51.12 C
ATOM 25 P U B 253 89.934 119.516 4.414 1.00 50.66 P
ATOM 26 OP1 U B 253 90.276 120.113 5.729 1.00 51.04 O
ATOM 27 OP2 U B 253 89.461 118.114 4.347 1.00 50.71 O
ATOM 28 O5' U B 253 88.849 120.440 3.700 1.00 50.86 O
TER
ATOM 2 P G A 234 93.902 112.578 -9.441 1.00 66.62 P
ATOM 3 OP1 G A 234 94.213 112.911 -10.858 1.00 67.99 O
ATOM 4 OP2 G A 234 94.794 111.660 -8.689 1.00 64.86 O
ATOM 5 O5' G A 234 93.737 113.929 -8.619 1.00 65.46 O
ATOM 6 C5' G A 234 92.614 114.800 -8.859 1.00 64.24 C
ATOM 7 C4' G A 234 92.673 115.986 -7.931 1.00 64.05 C
ATOM 8 O4' G A 234 92.424 115.540 -6.570 1.00 64.09 O
ATOM 9 C3' G A 234 94.016 116.708 -7.905 1.00 63.60 C
ATOM 10 O3' G A 234 93.814 118.095 -7.708 1.00 64.79 O
ATOM 11 C2' G A 234 94.702 116.091 -6.695 1.00 63.12 C
ATOM 12 O2' G A 234 95.682 116.925 -6.117 1.00 63.37 O
ATOM 13 C1' G A 234 93.521 115.884 -5.751 1.00 63.88 C
ATOM 14 N9 G A 234 93.748 114.803 -4.796 1.00 65.09 N
ATOM 15 C8 G A 234 94.303 113.571 -5.054 1.00 64.86 C
ATOM 16 N7 G A 234 94.457 112.843 -3.983 1.00 65.69 N
ATOM 17 C5 G A 234 93.957 113.634 -2.956 1.00 66.71 C
ATOM 18 C6 G A 234 93.875 113.385 -1.561 1.00 66.96 C
ATOM 19 O6 G A 234 94.244 112.388 -0.932 1.00 66.73 O
ATOM 20 N1 G A 234 93.292 114.451 -0.886 1.00 67.00 N
ATOM 21 C2 G A 234 92.843 115.607 -1.472 1.00 66.58 C
ATOM 22 N2 G A 234 92.304 116.509 -0.643 1.00 66.83 N
ATOM 23 N3 G A 234 92.918 115.857 -2.770 1.00 66.15 N
ATOM 24 C4 G A 234 93.488 114.836 -3.447 1.00 65.95 C
ATOM 25 P A A 235 94.246 119.126 -8.859 1.00 64.86 P
ATOM 26 OP1 A A 235 93.717 118.588 -10.140 1.00 66.68 O
ATOM 27 OP2 A A 235 95.694 119.409 -8.724 1.00 64.12 O
ATOM 28 O5' A A 235 93.421 120.442 -8.519 1.00 63.20 O
TER
ATOM 1 O3' U B 251 96.602 119.045 7.008 1.00 50.99 O
ATOM 2 P G B 252 95.340 118.240 6.443 1.00 50.67 P
ATOM 3 OP1 G B 252 94.145 118.573 7.250 1.00 51.07 O
ATOM 4 OP2 G B 252 95.745 116.828 6.278 1.00 49.66 O
ATOM 5 O5' G B 252 95.136 118.858 4.999 1.00 51.50 O
ATOM 6 C5' G B 252 94.632 120.183 4.836 1.00 50.76 C
ATOM 7 C4' G B 252 93.584 120.184 3.763 1.00 50.12 C
ATOM 8 O4' G B 252 94.217 119.826 2.507 1.00 49.95 O
ATOM 9 C3' G B 252 92.477 119.166 3.989 1.00 49.84 C
ATOM 10 O3' G B 252 91.243 119.642 3.494 1.00 50.13 O
ATOM 11 C2' G B 252 92.980 117.935 3.243 1.00 51.11 C
ATOM 12 O2' G B 252 91.955 117.076 2.776 1.00 49.30 O
ATOM 13 C1' G B 252 93.773 118.549 2.085 1.00 50.88 C
ATOM 14 N9 G B 252 94.953 117.743 1.769 1.00 50.30 N
ATOM 15 C8 G B 252 95.776 117.108 2.668 1.00 49.66 C
ATOM 16 N7 G B 252 96.721 116.416 2.100 1.00 49.97 N
ATOM 17 C5 G B 252 96.523 116.609 0.742 1.00 51.02 C
ATOM 18 C6 G B 252 97.230 116.087 -0.368 1.00 52.32 C
ATOM 19 O6 G B 252 98.197 115.306 -0.370 1.00 52.43 O
ATOM 20 N1 G B 252 96.704 116.551 -1.572 1.00 52.18 N
ATOM 21 C2 G B 252 95.633 117.398 -1.694 1.00 50.32 C
ATOM 22 N2 G B 252 95.291 117.739 -2.942 1.00 48.71 N
ATOM 23 N3 G B 252 94.951 117.877 -0.666 1.00 51.02 N
ATOM 24 C4 G B 252 95.447 117.443 0.517 1.00 51.12 C
ATOM 25 P U B 253 89.934 119.516 4.414 1.00 50.66 P
ATOM 26 OP1 U B 253 90.276 120.113 5.729 1.00 51.04 O
ATOM 27 OP2 U B 253 89.461 118.114 4.347 1.00 50.71 O
ATOM 28 O5' U B 253 88.849 120.440 3.700 1.00 50.86 O
TER
Atoms:
OP1: (94.213,112.911,-10.858)
OP2: (94.794,111.660,-8.689)
C3': (94.016,116.708,-7.905)
C1': (93.521,115.884,-5.751)
C5': (92.614,114.800,-8.859)
O6: (94.244,112.388,-0.932)
O4': (92.424,115.540,-6.570)
C8: (94.303,113.571,-5.054)
C2: (92.843,115.607,-1.472)
C6: (93.875,113.385,-1.561)
C5: (93.957,113.634,-2.956)
C4: (93.488,114.836,-3.447)
P: (93.902,112.578,-9.441)
C4': (92.673,115.986,-7.931)
C2': (94.702,116.091,-6.695)
O2': (95.682,116.925,-6.117)
N1: (93.292,114.451,-0.886)
N2: (92.304,116.509,-0.643)
N3: (92.918,115.857,-2.770)
N7: (94.457,112.843,-3.983)
N9: (93.748,114.803,-4.796)
O5': (93.737,113.929,-8.619)
O3': (93.814,118.095,-7.708)
OP2: (94.794,111.660,-8.689)
C3': (94.016,116.708,-7.905)
C1': (93.521,115.884,-5.751)
C5': (92.614,114.800,-8.859)
O6: (94.244,112.388,-0.932)
O4': (92.424,115.540,-6.570)
C8: (94.303,113.571,-5.054)
C2: (92.843,115.607,-1.472)
C6: (93.875,113.385,-1.561)
C5: (93.957,113.634,-2.956)
C4: (93.488,114.836,-3.447)
P: (93.902,112.578,-9.441)
C4': (92.673,115.986,-7.931)
C2': (94.702,116.091,-6.695)
O2': (95.682,116.925,-6.117)
N1: (93.292,114.451,-0.886)
N2: (92.304,116.509,-0.643)
N3: (92.918,115.857,-2.770)
N7: (94.457,112.843,-3.983)
N9: (93.748,114.803,-4.796)
O5': (93.737,113.929,-8.619)
O3': (93.814,118.095,-7.708)
OP1: (94.145,118.573,7.250)
OP2: (95.745,116.828,6.278)
C3': (92.477,119.166,3.989)
C1': (93.773,118.549,2.085)
C5': (94.632,120.183,4.836)
O6: (98.197,115.306,-0.370)
O4': (94.217,119.826,2.507)
C8: (95.776,117.108,2.668)
C2: (95.633,117.398,-1.694)
C6: (97.230,116.087,-0.368)
C5: (96.523,116.609,0.742)
C4: (95.447,117.443,0.517)
P: (95.340,118.240,6.443)
C4': (93.584,120.184,3.763)
C2': (92.980,117.935,3.243)
O2': (91.955,117.076,2.776)
N1: (96.704,116.551,-1.572)
N2: (95.291,117.739,-2.942)
N3: (94.951,117.877,-0.666)
N7: (96.721,116.416,2.100)
N9: (94.953,117.743,1.769)
O5': (95.136,118.858,4.999)
O3': (91.243,119.642,3.494)
OP2: (95.745,116.828,6.278)
C3': (92.477,119.166,3.989)
C1': (93.773,118.549,2.085)
C5': (94.632,120.183,4.836)
O6: (98.197,115.306,-0.370)
O4': (94.217,119.826,2.507)
C8: (95.776,117.108,2.668)
C2: (95.633,117.398,-1.694)
C6: (97.230,116.087,-0.368)
C5: (96.523,116.609,0.742)
C4: (95.447,117.443,0.517)
P: (95.340,118.240,6.443)
C4': (93.584,120.184,3.763)
C2': (92.980,117.935,3.243)
O2': (91.955,117.076,2.776)
N1: (96.704,116.551,-1.572)
N2: (95.291,117.739,-2.942)
N3: (94.951,117.877,-0.666)
N7: (96.721,116.416,2.100)
N9: (94.953,117.743,1.769)
O5': (95.136,118.858,4.999)
O3': (91.243,119.642,3.494)
Image (generated by PyMOL):