ClaRNA

Doublet info:

Details

Nucleotide types: GG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3CMA:0446:0452

Extra

PDB:
ATOM 1 O3' U A 445 49.482 128.891 52.993 1.00 27.22 O
ATOM 2 P G A 446 49.962 128.834 54.506 1.00 26.14 P
ATOM 3 OP1 G A 446 51.175 127.986 54.532 1.00 28.03 O
ATOM 4 OP2 G A 446 48.784 128.462 55.327 1.00 29.77 O
ATOM 5 O5' G A 446 50.355 130.338 54.836 1.00 26.93 O
ATOM 6 C5' G A 446 50.362 130.813 56.195 1.00 26.38 C
ATOM 7 C4' G A 446 50.594 132.298 56.217 1.00 24.77 C
ATOM 8 O4' G A 446 51.910 132.579 55.695 1.00 24.14 O
ATOM 9 C3' G A 446 49.656 133.093 55.332 1.00 25.13 C
ATOM 10 O3' G A 446 48.459 133.371 56.039 1.00 25.73 O
ATOM 11 C2' G A 446 50.467 134.344 55.035 1.00 24.19 C
ATOM 12 O2' G A 446 50.480 135.236 56.132 1.00 24.71 O
ATOM 13 C1' G A 446 51.873 133.762 54.924 1.00 24.20 C
ATOM 14 N9 G A 446 52.380 133.455 53.588 1.00 24.39 N
ATOM 15 C8 G A 446 52.769 132.225 53.119 1.00 25.81 C
ATOM 16 N7 G A 446 53.305 132.273 51.932 1.00 25.56 N
ATOM 17 C5 G A 446 53.241 133.612 51.583 1.00 24.46 C
ATOM 18 C6 G A 446 53.699 134.273 50.423 1.00 23.26 C
ATOM 19 O6 G A 446 54.271 133.792 49.444 1.00 23.00 O
ATOM 20 N1 G A 446 53.440 135.637 50.478 1.00 22.21 N
ATOM 21 C2 G A 446 52.820 136.281 51.522 1.00 23.47 C
ATOM 22 N2 G A 446 52.667 137.604 51.406 1.00 25.23 N
ATOM 23 N3 G A 446 52.387 135.672 52.608 1.00 25.40 N
ATOM 24 C4 G A 446 52.636 134.349 52.577 1.00 24.64 C
ATOM 25 P A A 447 47.071 133.437 55.250 1.00 27.57 P
ATOM 26 OP1 A A 447 46.018 133.645 56.265 1.00 25.67 O
ATOM 27 OP2 A A 447 46.995 132.262 54.342 1.00 30.62 O
ATOM 28 O5' A A 447 47.205 134.738 54.340 1.00 27.19 O
TER

ATOM 1 O3' A B 451 51.662 140.917 48.994 1.00 41.15 O
ATOM 2 P G B 452 52.204 140.858 47.490 1.00 40.78 P
ATOM 3 OP1 G B 452 52.503 142.244 47.066 1.00 39.48 O
ATOM 4 OP2 G B 452 51.256 140.040 46.703 1.00 42.02 O
ATOM 5 O5' G B 452 53.560 140.032 47.648 1.00 42.22 O
ATOM 6 C5' G B 452 54.799 140.678 48.034 1.00 43.60 C
ATOM 7 C4' G B 452 54.803 140.993 49.519 1.00 44.36 C
ATOM 8 O4' G B 452 54.610 139.774 50.299 1.00 43.37 O
ATOM 9 C3' G B 452 56.091 141.618 50.062 1.00 44.38 C
ATOM 10 O3' G B 452 55.720 142.531 51.095 1.00 46.75 O
ATOM 11 C2' G B 452 56.799 140.414 50.673 1.00 42.01 C
ATOM 12 O2' G B 452 57.753 140.748 51.653 1.00 43.70 O
ATOM 13 C1' G B 452 55.606 139.709 51.298 1.00 41.31 C
ATOM 14 N9 G B 452 55.779 138.328 51.734 1.00 38.57 N
ATOM 15 C8 G B 452 56.334 137.284 51.038 1.00 37.81 C
ATOM 16 N7 G B 452 56.317 136.162 51.702 1.00 37.08 N
ATOM 17 C5 G B 452 55.717 136.488 52.911 1.00 35.76 C
ATOM 18 C6 G B 452 55.405 135.677 54.030 1.00 35.09 C
ATOM 19 O6 G B 452 55.591 134.466 54.183 1.00 35.62 O
ATOM 20 N1 G B 452 54.808 136.412 55.042 1.00 35.05 N
ATOM 21 C2 G B 452 54.538 137.750 54.988 1.00 37.04 C
ATOM 22 N2 G B 452 53.974 138.278 56.082 1.00 37.46 N
ATOM 23 N3 G B 452 54.805 138.515 53.945 1.00 37.40 N
ATOM 24 C4 G B 452 55.392 137.821 52.950 1.00 36.58 C
ATOM 25 P U B 453 56.806 143.543 51.717 1.00 48.81 P
ATOM 26 OP1 U B 453 57.709 144.004 50.627 1.00 48.46 O
ATOM 27 OP2 U B 453 57.388 142.922 52.944 1.00 47.70 O
ATOM 28 O5' U B 453 55.922 144.775 52.200 1.00 44.23 O
TER

Atoms:
OP1: (51.175,127.986,54.532)
OP2: (48.784,128.462,55.327)
C3': (49.656,133.093,55.332)
C1': (51.873,133.762,54.924)
C5': (50.362,130.813,56.195)
O6: (54.271,133.792,49.444)
O4': (51.910,132.579,55.695)
C8: (52.769,132.225,53.119)
C2: (52.820,136.281,51.522)
C6: (53.699,134.273,50.423)
C5: (53.241,133.612,51.583)
C4: (52.636,134.349,52.577)
P: (49.962,128.834,54.506)
C4': (50.594,132.298,56.217)
C2': (50.467,134.344,55.035)
O2': (50.480,135.236,56.132)
N1: (53.440,135.637,50.478)
N2: (52.667,137.604,51.406)
N3: (52.387,135.672,52.608)
N7: (53.305,132.273,51.932)
N9: (52.380,133.455,53.588)
O5': (50.355,130.338,54.836)
O3': (48.459,133.371,56.039)
OP1: (52.503,142.244,47.066)
OP2: (51.256,140.040,46.703)
C3': (56.091,141.618,50.062)
C1': (55.606,139.709,51.298)
C5': (54.799,140.678,48.034)
O6: (55.591,134.466,54.183)
O4': (54.610,139.774,50.299)
C8: (56.334,137.284,51.038)
C2: (54.538,137.750,54.988)
C6: (55.405,135.677,54.030)
C5: (55.717,136.488,52.911)
C4: (55.392,137.821,52.950)
P: (52.204,140.858,47.490)
C4': (54.803,140.993,49.519)
C2': (56.799,140.414,50.673)
O2': (57.753,140.748,51.653)
N1: (54.808,136.412,55.042)
N2: (53.974,138.278,56.082)
N3: (54.805,138.515,53.945)
N7: (56.317,136.162,51.702)
N9: (55.779,138.328,51.734)
O5': (53.560,140.032,47.648)
O3': (55.720,142.531,51.095)
Image (generated by PyMOL):
PyMOL image
show in jmol