Doublet info:
Details
Nucleotide types:
AG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3KNI:A1276:A1289
Extra
PDB:
ATOM 1 O3' C A1275 31.442 -86.439 -15.698 1.00 54.71 O
ATOM 2 P A A1276 32.503 -87.277 -14.862 1.00 68.22 P
ATOM 3 OP1 A A1276 32.052 -88.686 -14.762 1.00 74.41 O
ATOM 4 OP2 A A1276 32.848 -86.509 -13.632 1.00 61.41 O
ATOM 5 O5' A A1276 33.767 -87.246 -15.812 1.00 59.59 O
ATOM 6 C5' A A1276 34.342 -86.007 -16.145 1.00 59.32 C
ATOM 7 C4' A A1276 35.551 -86.209 -16.991 1.00 52.29 C
ATOM 8 O4' A A1276 35.132 -86.387 -18.358 1.00 54.87 O
ATOM 9 C3' A A1276 36.425 -84.980 -16.939 1.00 50.60 C
ATOM 10 O3' A A1276 37.526 -85.410 -16.159 1.00 47.79 O
ATOM 11 C2' A A1276 36.853 -84.782 -18.380 1.00 55.14 C
ATOM 12 O2' A A1276 38.000 -85.554 -18.639 1.00 54.14 O
ATOM 13 C1' A A1276 35.665 -85.360 -19.150 1.00 51.35 C
ATOM 14 N9 A A1276 34.572 -84.431 -19.428 1.00 48.10 N
ATOM 15 C8 A A1276 33.291 -84.524 -18.945 1.00 56.29 C
ATOM 16 N7 A A1276 32.487 -83.595 -19.393 1.00 58.84 N
ATOM 17 C5 A A1276 33.290 -82.828 -20.216 1.00 53.19 C
ATOM 18 C6 A A1276 33.024 -81.698 -20.986 1.00 58.74 C
ATOM 19 N6 A A1276 31.813 -81.129 -21.052 1.00 60.04 N
ATOM 20 N1 A A1276 34.046 -81.157 -21.691 1.00 59.74 N
ATOM 21 C2 A A1276 35.252 -81.732 -21.614 1.00 52.53 C
ATOM 22 N3 A A1276 35.625 -82.808 -20.922 1.00 56.82 N
ATOM 23 C4 A A1276 34.584 -83.319 -20.236 1.00 52.52 C
ATOM 24 P A A1277 38.403 -84.364 -15.331 1.00 52.17 P
ATOM 25 OP1 A A1277 39.677 -85.072 -15.026 1.00 54.27 O
ATOM 26 OP2 A A1277 37.602 -83.753 -14.235 1.00 47.70 O
ATOM 27 O5' A A1277 38.714 -83.216 -16.378 1.00 48.60 O
TER
ATOM 1 O3' C B1288 32.090 -74.106 -22.086 1.00 52.14 O
ATOM 2 P G B1289 31.199 -74.139 -23.413 1.00 46.48 P
ATOM 3 OP1 G B1289 32.131 -73.855 -24.534 1.00 44.87 O
ATOM 4 OP2 G B1289 30.009 -73.265 -23.203 1.00 58.62 O
ATOM 5 O5' G B1289 30.756 -75.664 -23.506 1.00 44.46 O
ATOM 6 C5' G B1289 31.729 -76.659 -23.789 1.00 51.31 C
ATOM 7 C4' G B1289 31.104 -78.027 -23.786 1.00 53.72 C
ATOM 8 O4' G B1289 30.757 -78.371 -22.429 1.00 50.20 O
ATOM 9 C3' G B1289 29.808 -78.151 -24.565 1.00 53.34 C
ATOM 10 O3' G B1289 30.031 -78.372 -25.945 1.00 49.85 O
ATOM 11 C2' G B1289 29.121 -79.314 -23.876 1.00 52.16 C
ATOM 12 O2' G B1289 29.592 -80.569 -24.317 1.00 59.19 O
ATOM 13 C1' G B1289 29.541 -79.085 -22.426 1.00 48.93 C
ATOM 14 N9 G B1289 28.561 -78.272 -21.723 1.00 54.51 N
ATOM 15 C8 G B1289 28.708 -76.983 -21.265 1.00 53.17 C
ATOM 16 N7 G B1289 27.644 -76.538 -20.658 1.00 52.68 N
ATOM 17 C5 G B1289 26.747 -77.598 -20.724 1.00 52.74 C
ATOM 18 C6 G B1289 25.424 -77.717 -20.241 1.00 53.72 C
ATOM 19 O6 G B1289 24.752 -76.885 -19.617 1.00 54.72 O
ATOM 20 N1 G B1289 24.881 -78.958 -20.549 1.00 50.80 N
ATOM 21 C2 G B1289 25.526 -79.954 -21.234 1.00 54.77 C
ATOM 22 N2 G B1289 24.839 -81.079 -21.455 1.00 62.34 N
ATOM 23 N3 G B1289 26.753 -79.859 -21.678 1.00 54.61 N
ATOM 24 C4 G B1289 27.299 -78.664 -21.389 1.00 52.58 C
ATOM 25 P U B1290 29.026 -77.719 -27.010 1.00 55.99 P
ATOM 26 OP1 U B1290 29.545 -78.014 -28.376 1.00 45.10 O
ATOM 27 OP2 U B1290 28.818 -76.304 -26.576 1.00 46.80 O
ATOM 28 O5' U B1290 27.678 -78.553 -26.813 1.00 63.83 O
TER
ATOM 2 P A A1276 32.503 -87.277 -14.862 1.00 68.22 P
ATOM 3 OP1 A A1276 32.052 -88.686 -14.762 1.00 74.41 O
ATOM 4 OP2 A A1276 32.848 -86.509 -13.632 1.00 61.41 O
ATOM 5 O5' A A1276 33.767 -87.246 -15.812 1.00 59.59 O
ATOM 6 C5' A A1276 34.342 -86.007 -16.145 1.00 59.32 C
ATOM 7 C4' A A1276 35.551 -86.209 -16.991 1.00 52.29 C
ATOM 8 O4' A A1276 35.132 -86.387 -18.358 1.00 54.87 O
ATOM 9 C3' A A1276 36.425 -84.980 -16.939 1.00 50.60 C
ATOM 10 O3' A A1276 37.526 -85.410 -16.159 1.00 47.79 O
ATOM 11 C2' A A1276 36.853 -84.782 -18.380 1.00 55.14 C
ATOM 12 O2' A A1276 38.000 -85.554 -18.639 1.00 54.14 O
ATOM 13 C1' A A1276 35.665 -85.360 -19.150 1.00 51.35 C
ATOM 14 N9 A A1276 34.572 -84.431 -19.428 1.00 48.10 N
ATOM 15 C8 A A1276 33.291 -84.524 -18.945 1.00 56.29 C
ATOM 16 N7 A A1276 32.487 -83.595 -19.393 1.00 58.84 N
ATOM 17 C5 A A1276 33.290 -82.828 -20.216 1.00 53.19 C
ATOM 18 C6 A A1276 33.024 -81.698 -20.986 1.00 58.74 C
ATOM 19 N6 A A1276 31.813 -81.129 -21.052 1.00 60.04 N
ATOM 20 N1 A A1276 34.046 -81.157 -21.691 1.00 59.74 N
ATOM 21 C2 A A1276 35.252 -81.732 -21.614 1.00 52.53 C
ATOM 22 N3 A A1276 35.625 -82.808 -20.922 1.00 56.82 N
ATOM 23 C4 A A1276 34.584 -83.319 -20.236 1.00 52.52 C
ATOM 24 P A A1277 38.403 -84.364 -15.331 1.00 52.17 P
ATOM 25 OP1 A A1277 39.677 -85.072 -15.026 1.00 54.27 O
ATOM 26 OP2 A A1277 37.602 -83.753 -14.235 1.00 47.70 O
ATOM 27 O5' A A1277 38.714 -83.216 -16.378 1.00 48.60 O
TER
ATOM 1 O3' C B1288 32.090 -74.106 -22.086 1.00 52.14 O
ATOM 2 P G B1289 31.199 -74.139 -23.413 1.00 46.48 P
ATOM 3 OP1 G B1289 32.131 -73.855 -24.534 1.00 44.87 O
ATOM 4 OP2 G B1289 30.009 -73.265 -23.203 1.00 58.62 O
ATOM 5 O5' G B1289 30.756 -75.664 -23.506 1.00 44.46 O
ATOM 6 C5' G B1289 31.729 -76.659 -23.789 1.00 51.31 C
ATOM 7 C4' G B1289 31.104 -78.027 -23.786 1.00 53.72 C
ATOM 8 O4' G B1289 30.757 -78.371 -22.429 1.00 50.20 O
ATOM 9 C3' G B1289 29.808 -78.151 -24.565 1.00 53.34 C
ATOM 10 O3' G B1289 30.031 -78.372 -25.945 1.00 49.85 O
ATOM 11 C2' G B1289 29.121 -79.314 -23.876 1.00 52.16 C
ATOM 12 O2' G B1289 29.592 -80.569 -24.317 1.00 59.19 O
ATOM 13 C1' G B1289 29.541 -79.085 -22.426 1.00 48.93 C
ATOM 14 N9 G B1289 28.561 -78.272 -21.723 1.00 54.51 N
ATOM 15 C8 G B1289 28.708 -76.983 -21.265 1.00 53.17 C
ATOM 16 N7 G B1289 27.644 -76.538 -20.658 1.00 52.68 N
ATOM 17 C5 G B1289 26.747 -77.598 -20.724 1.00 52.74 C
ATOM 18 C6 G B1289 25.424 -77.717 -20.241 1.00 53.72 C
ATOM 19 O6 G B1289 24.752 -76.885 -19.617 1.00 54.72 O
ATOM 20 N1 G B1289 24.881 -78.958 -20.549 1.00 50.80 N
ATOM 21 C2 G B1289 25.526 -79.954 -21.234 1.00 54.77 C
ATOM 22 N2 G B1289 24.839 -81.079 -21.455 1.00 62.34 N
ATOM 23 N3 G B1289 26.753 -79.859 -21.678 1.00 54.61 N
ATOM 24 C4 G B1289 27.299 -78.664 -21.389 1.00 52.58 C
ATOM 25 P U B1290 29.026 -77.719 -27.010 1.00 55.99 P
ATOM 26 OP1 U B1290 29.545 -78.014 -28.376 1.00 45.10 O
ATOM 27 OP2 U B1290 28.818 -76.304 -26.576 1.00 46.80 O
ATOM 28 O5' U B1290 27.678 -78.553 -26.813 1.00 63.83 O
TER
Atoms:
OP1: (32.052,-88.686,-14.762)
OP2: (32.848,-86.509,-13.632)
C3': (36.425,-84.980,-16.939)
C1': (35.665,-85.360,-19.150)
C5': (34.342,-86.007,-16.145)
O4': (35.132,-86.387,-18.358)
C8: (33.291,-84.524,-18.945)
O2': (38.000,-85.554,-18.639)
C6: (33.024,-81.698,-20.986)
C5: (33.290,-82.828,-20.216)
C4: (34.584,-83.319,-20.236)
P: (32.503,-87.277,-14.862)
C4': (35.551,-86.209,-16.991)
C2': (36.853,-84.782,-18.380)
C2: (35.252,-81.732,-21.614)
N1: (34.046,-81.157,-21.691)
N3: (35.625,-82.808,-20.922)
N6: (31.813,-81.129,-21.052)
N7: (32.487,-83.595,-19.393)
N9: (34.572,-84.431,-19.428)
O5': (33.767,-87.246,-15.812)
O3': (37.526,-85.410,-16.159)
OP2: (32.848,-86.509,-13.632)
C3': (36.425,-84.980,-16.939)
C1': (35.665,-85.360,-19.150)
C5': (34.342,-86.007,-16.145)
O4': (35.132,-86.387,-18.358)
C8: (33.291,-84.524,-18.945)
O2': (38.000,-85.554,-18.639)
C6: (33.024,-81.698,-20.986)
C5: (33.290,-82.828,-20.216)
C4: (34.584,-83.319,-20.236)
P: (32.503,-87.277,-14.862)
C4': (35.551,-86.209,-16.991)
C2': (36.853,-84.782,-18.380)
C2: (35.252,-81.732,-21.614)
N1: (34.046,-81.157,-21.691)
N3: (35.625,-82.808,-20.922)
N6: (31.813,-81.129,-21.052)
N7: (32.487,-83.595,-19.393)
N9: (34.572,-84.431,-19.428)
O5': (33.767,-87.246,-15.812)
O3': (37.526,-85.410,-16.159)
OP1: (32.131,-73.855,-24.534)
OP2: (30.009,-73.265,-23.203)
C3': (29.808,-78.151,-24.565)
C1': (29.541,-79.085,-22.426)
C5': (31.729,-76.659,-23.789)
O6: (24.752,-76.885,-19.617)
O4': (30.757,-78.371,-22.429)
C8: (28.708,-76.983,-21.265)
C2: (25.526,-79.954,-21.234)
C6: (25.424,-77.717,-20.241)
C5: (26.747,-77.598,-20.724)
C4: (27.299,-78.664,-21.389)
P: (31.199,-74.139,-23.413)
C4': (31.104,-78.027,-23.786)
C2': (29.121,-79.314,-23.876)
O2': (29.592,-80.569,-24.317)
N1: (24.881,-78.958,-20.549)
N2: (24.839,-81.079,-21.455)
N3: (26.753,-79.859,-21.678)
N7: (27.644,-76.538,-20.658)
N9: (28.561,-78.272,-21.723)
O5': (30.756,-75.664,-23.506)
O3': (30.031,-78.372,-25.945)
OP2: (30.009,-73.265,-23.203)
C3': (29.808,-78.151,-24.565)
C1': (29.541,-79.085,-22.426)
C5': (31.729,-76.659,-23.789)
O6: (24.752,-76.885,-19.617)
O4': (30.757,-78.371,-22.429)
C8: (28.708,-76.983,-21.265)
C2: (25.526,-79.954,-21.234)
C6: (25.424,-77.717,-20.241)
C5: (26.747,-77.598,-20.724)
C4: (27.299,-78.664,-21.389)
P: (31.199,-74.139,-23.413)
C4': (31.104,-78.027,-23.786)
C2': (29.121,-79.314,-23.876)
O2': (29.592,-80.569,-24.317)
N1: (24.881,-78.958,-20.549)
N2: (24.839,-81.079,-21.455)
N3: (26.753,-79.859,-21.678)
N7: (27.644,-76.538,-20.658)
N9: (28.561,-78.272,-21.723)
O5': (30.756,-75.664,-23.506)
O3': (30.031,-78.372,-25.945)
Image (generated by PyMOL):