Doublet info:
Details
Nucleotide types:
GG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3G9C:P134:P87
Extra
PDB:
ATOM 1 O3' U A 133 -24.579 -80.183 2.179 1.00100.01 O
ATOM 2 P G A 134 -23.652 -81.372 2.714 1.00 99.97 P
ATOM 3 OP1 G A 134 -22.676 -81.703 1.652 1.00100.00 O
ATOM 4 OP2 G A 134 -24.534 -82.428 3.259 1.00 99.90 O
ATOM 5 O5' G A 134 -22.876 -80.698 3.940 1.00 99.31 O
ATOM 6 C5' G A 134 -21.535 -81.077 4.228 1.00 98.21 C
ATOM 7 C4' G A 134 -20.561 -80.005 3.773 1.00 97.51 C
ATOM 8 O4' G A 134 -20.782 -78.796 4.543 1.00 97.37 O
ATOM 9 C3' G A 134 -19.091 -80.349 3.970 1.00 97.03 C
ATOM 10 O3' G A 134 -18.300 -79.681 2.995 1.00 96.31 O
ATOM 11 C2' G A 134 -18.821 -79.815 5.372 1.00 97.05 C
ATOM 12 O2' G A 134 -17.460 -79.487 5.570 1.00 97.00 O
ATOM 13 C1' G A 134 -19.675 -78.552 5.390 1.00 97.08 C
ATOM 14 N9 G A 134 -20.180 -78.211 6.717 1.00 96.94 N
ATOM 15 C8 G A 134 -21.393 -78.567 7.256 1.00 97.01 C
ATOM 16 N7 G A 134 -21.574 -78.119 8.467 1.00 97.00 N
ATOM 17 C5 G A 134 -20.407 -77.421 8.750 1.00 96.90 C
ATOM 18 C6 G A 134 -20.029 -76.718 9.918 1.00 96.90 C
ATOM 19 O6 G A 134 -20.676 -76.571 10.966 1.00 96.85 O
ATOM 20 N1 G A 134 -18.760 -76.153 9.789 1.00 96.91 N
ATOM 21 C2 G A 134 -17.963 -76.256 8.674 1.00 96.97 C
ATOM 22 N2 G A 134 -16.771 -75.644 8.736 1.00 97.10 N
ATOM 23 N3 G A 134 -18.307 -76.913 7.573 1.00 96.91 N
ATOM 24 C4 G A 134 -19.539 -77.468 7.683 1.00 96.90 C
ATOM 25 P U A 135 -17.752 -80.483 1.724 1.00 95.56 P
ATOM 26 OP1 U A 135 -16.387 -79.992 1.430 1.00 95.47 O
ATOM 27 OP2 U A 135 -18.795 -80.439 0.674 1.00 95.51 O
ATOM 28 O5' U A 135 -17.630 -81.981 2.272 1.00 94.94 O
TER
ATOM 1 O3' A B 86 -16.220 -70.111 14.637 1.00 85.93 O
ATOM 2 P G B 87 -17.355 -71.174 14.258 1.00 85.81 P
ATOM 3 OP1 G B 87 -18.655 -70.466 14.245 1.00 85.66 O
ATOM 4 OP2 G B 87 -17.171 -72.363 15.120 1.00 85.98 O
ATOM 5 O5' G B 87 -16.992 -71.565 12.750 1.00 85.56 O
ATOM 6 C5' G B 87 -15.664 -71.394 12.268 1.00 85.16 C
ATOM 7 C4' G B 87 -15.638 -71.410 10.750 1.00 84.87 C
ATOM 8 O4' G B 87 -16.075 -72.709 10.276 1.00 84.52 O
ATOM 9 C3' G B 87 -16.565 -70.402 10.084 1.00 84.92 C
ATOM 10 O3' G B 87 -15.881 -69.170 9.875 1.00 85.19 O
ATOM 11 C2' G B 87 -16.909 -71.097 8.770 1.00 84.68 C
ATOM 12 O2' G B 87 -15.902 -70.953 7.788 1.00 84.67 O
ATOM 13 C1' G B 87 -16.998 -72.553 9.215 1.00 84.44 C
ATOM 14 N9 G B 87 -18.323 -72.935 9.695 1.00 84.03 N
ATOM 15 C8 G B 87 -18.697 -73.166 10.997 1.00 83.83 C
ATOM 16 N7 G B 87 -19.952 -73.494 11.127 1.00 83.73 N
ATOM 17 C5 G B 87 -20.444 -73.479 9.828 1.00 83.65 C
ATOM 18 C6 G B 87 -21.745 -73.753 9.343 1.00 83.64 C
ATOM 19 O6 G B 87 -22.753 -74.074 9.987 1.00 83.64 O
ATOM 20 N1 G B 87 -21.815 -73.625 7.957 1.00 83.55 N
ATOM 21 C2 G B 87 -20.762 -73.276 7.145 1.00 83.37 C
ATOM 22 N2 G B 87 -21.023 -73.203 5.832 1.00 83.30 N
ATOM 23 N3 G B 87 -19.538 -73.017 7.588 1.00 83.41 N
ATOM 24 C4 G B 87 -19.453 -73.138 8.935 1.00 83.66 C
ATOM 25 P C B 88 -16.697 -67.793 9.904 1.00 85.43 P
ATOM 26 OP1 C B 88 -15.735 -66.668 9.914 1.00 85.55 O
ATOM 27 OP2 C B 88 -17.717 -67.875 10.975 1.00 85.31 O
ATOM 28 O5' C B 88 -17.442 -67.793 8.490 1.00 85.94 O
TER
ATOM 2 P G A 134 -23.652 -81.372 2.714 1.00 99.97 P
ATOM 3 OP1 G A 134 -22.676 -81.703 1.652 1.00100.00 O
ATOM 4 OP2 G A 134 -24.534 -82.428 3.259 1.00 99.90 O
ATOM 5 O5' G A 134 -22.876 -80.698 3.940 1.00 99.31 O
ATOM 6 C5' G A 134 -21.535 -81.077 4.228 1.00 98.21 C
ATOM 7 C4' G A 134 -20.561 -80.005 3.773 1.00 97.51 C
ATOM 8 O4' G A 134 -20.782 -78.796 4.543 1.00 97.37 O
ATOM 9 C3' G A 134 -19.091 -80.349 3.970 1.00 97.03 C
ATOM 10 O3' G A 134 -18.300 -79.681 2.995 1.00 96.31 O
ATOM 11 C2' G A 134 -18.821 -79.815 5.372 1.00 97.05 C
ATOM 12 O2' G A 134 -17.460 -79.487 5.570 1.00 97.00 O
ATOM 13 C1' G A 134 -19.675 -78.552 5.390 1.00 97.08 C
ATOM 14 N9 G A 134 -20.180 -78.211 6.717 1.00 96.94 N
ATOM 15 C8 G A 134 -21.393 -78.567 7.256 1.00 97.01 C
ATOM 16 N7 G A 134 -21.574 -78.119 8.467 1.00 97.00 N
ATOM 17 C5 G A 134 -20.407 -77.421 8.750 1.00 96.90 C
ATOM 18 C6 G A 134 -20.029 -76.718 9.918 1.00 96.90 C
ATOM 19 O6 G A 134 -20.676 -76.571 10.966 1.00 96.85 O
ATOM 20 N1 G A 134 -18.760 -76.153 9.789 1.00 96.91 N
ATOM 21 C2 G A 134 -17.963 -76.256 8.674 1.00 96.97 C
ATOM 22 N2 G A 134 -16.771 -75.644 8.736 1.00 97.10 N
ATOM 23 N3 G A 134 -18.307 -76.913 7.573 1.00 96.91 N
ATOM 24 C4 G A 134 -19.539 -77.468 7.683 1.00 96.90 C
ATOM 25 P U A 135 -17.752 -80.483 1.724 1.00 95.56 P
ATOM 26 OP1 U A 135 -16.387 -79.992 1.430 1.00 95.47 O
ATOM 27 OP2 U A 135 -18.795 -80.439 0.674 1.00 95.51 O
ATOM 28 O5' U A 135 -17.630 -81.981 2.272 1.00 94.94 O
TER
ATOM 1 O3' A B 86 -16.220 -70.111 14.637 1.00 85.93 O
ATOM 2 P G B 87 -17.355 -71.174 14.258 1.00 85.81 P
ATOM 3 OP1 G B 87 -18.655 -70.466 14.245 1.00 85.66 O
ATOM 4 OP2 G B 87 -17.171 -72.363 15.120 1.00 85.98 O
ATOM 5 O5' G B 87 -16.992 -71.565 12.750 1.00 85.56 O
ATOM 6 C5' G B 87 -15.664 -71.394 12.268 1.00 85.16 C
ATOM 7 C4' G B 87 -15.638 -71.410 10.750 1.00 84.87 C
ATOM 8 O4' G B 87 -16.075 -72.709 10.276 1.00 84.52 O
ATOM 9 C3' G B 87 -16.565 -70.402 10.084 1.00 84.92 C
ATOM 10 O3' G B 87 -15.881 -69.170 9.875 1.00 85.19 O
ATOM 11 C2' G B 87 -16.909 -71.097 8.770 1.00 84.68 C
ATOM 12 O2' G B 87 -15.902 -70.953 7.788 1.00 84.67 O
ATOM 13 C1' G B 87 -16.998 -72.553 9.215 1.00 84.44 C
ATOM 14 N9 G B 87 -18.323 -72.935 9.695 1.00 84.03 N
ATOM 15 C8 G B 87 -18.697 -73.166 10.997 1.00 83.83 C
ATOM 16 N7 G B 87 -19.952 -73.494 11.127 1.00 83.73 N
ATOM 17 C5 G B 87 -20.444 -73.479 9.828 1.00 83.65 C
ATOM 18 C6 G B 87 -21.745 -73.753 9.343 1.00 83.64 C
ATOM 19 O6 G B 87 -22.753 -74.074 9.987 1.00 83.64 O
ATOM 20 N1 G B 87 -21.815 -73.625 7.957 1.00 83.55 N
ATOM 21 C2 G B 87 -20.762 -73.276 7.145 1.00 83.37 C
ATOM 22 N2 G B 87 -21.023 -73.203 5.832 1.00 83.30 N
ATOM 23 N3 G B 87 -19.538 -73.017 7.588 1.00 83.41 N
ATOM 24 C4 G B 87 -19.453 -73.138 8.935 1.00 83.66 C
ATOM 25 P C B 88 -16.697 -67.793 9.904 1.00 85.43 P
ATOM 26 OP1 C B 88 -15.735 -66.668 9.914 1.00 85.55 O
ATOM 27 OP2 C B 88 -17.717 -67.875 10.975 1.00 85.31 O
ATOM 28 O5' C B 88 -17.442 -67.793 8.490 1.00 85.94 O
TER
Atoms:
OP1: (-22.676,-81.703,1.652)
OP2: (-24.534,-82.428,3.259)
C3': (-19.091,-80.349,3.970)
C1': (-19.675,-78.552,5.390)
C5': (-21.535,-81.077,4.228)
O6: (-20.676,-76.571,10.966)
O4': (-20.782,-78.796,4.543)
C8: (-21.393,-78.567,7.256)
C2: (-17.963,-76.256,8.674)
C6: (-20.029,-76.718,9.918)
C5: (-20.407,-77.421,8.750)
C4: (-19.539,-77.468,7.683)
P: (-23.652,-81.372,2.714)
C4': (-20.561,-80.005,3.773)
C2': (-18.821,-79.815,5.372)
O2': (-17.460,-79.487,5.570)
N1: (-18.760,-76.153,9.789)
N2: (-16.771,-75.644,8.736)
N3: (-18.307,-76.913,7.573)
N7: (-21.574,-78.119,8.467)
N9: (-20.180,-78.211,6.717)
O5': (-22.876,-80.698,3.940)
O3': (-18.300,-79.681,2.995)
OP2: (-24.534,-82.428,3.259)
C3': (-19.091,-80.349,3.970)
C1': (-19.675,-78.552,5.390)
C5': (-21.535,-81.077,4.228)
O6: (-20.676,-76.571,10.966)
O4': (-20.782,-78.796,4.543)
C8: (-21.393,-78.567,7.256)
C2: (-17.963,-76.256,8.674)
C6: (-20.029,-76.718,9.918)
C5: (-20.407,-77.421,8.750)
C4: (-19.539,-77.468,7.683)
P: (-23.652,-81.372,2.714)
C4': (-20.561,-80.005,3.773)
C2': (-18.821,-79.815,5.372)
O2': (-17.460,-79.487,5.570)
N1: (-18.760,-76.153,9.789)
N2: (-16.771,-75.644,8.736)
N3: (-18.307,-76.913,7.573)
N7: (-21.574,-78.119,8.467)
N9: (-20.180,-78.211,6.717)
O5': (-22.876,-80.698,3.940)
O3': (-18.300,-79.681,2.995)
OP1: (-18.655,-70.466,14.245)
OP2: (-17.171,-72.363,15.120)
C3': (-16.565,-70.402,10.084)
C1': (-16.998,-72.553,9.215)
C5': (-15.664,-71.394,12.268)
O6: (-22.753,-74.074,9.987)
O4': (-16.075,-72.709,10.276)
C8: (-18.697,-73.166,10.997)
C2: (-20.762,-73.276,7.145)
C6: (-21.745,-73.753,9.343)
C5: (-20.444,-73.479,9.828)
C4: (-19.453,-73.138,8.935)
P: (-17.355,-71.174,14.258)
C4': (-15.638,-71.410,10.750)
C2': (-16.909,-71.097,8.770)
O2': (-15.902,-70.953,7.788)
N1: (-21.815,-73.625,7.957)
N2: (-21.023,-73.203,5.832)
N3: (-19.538,-73.017,7.588)
N7: (-19.952,-73.494,11.127)
N9: (-18.323,-72.935,9.695)
O5': (-16.992,-71.565,12.750)
O3': (-15.881,-69.170,9.875)
OP2: (-17.171,-72.363,15.120)
C3': (-16.565,-70.402,10.084)
C1': (-16.998,-72.553,9.215)
C5': (-15.664,-71.394,12.268)
O6: (-22.753,-74.074,9.987)
O4': (-16.075,-72.709,10.276)
C8: (-18.697,-73.166,10.997)
C2: (-20.762,-73.276,7.145)
C6: (-21.745,-73.753,9.343)
C5: (-20.444,-73.479,9.828)
C4: (-19.453,-73.138,8.935)
P: (-17.355,-71.174,14.258)
C4': (-15.638,-71.410,10.750)
C2': (-16.909,-71.097,8.770)
O2': (-15.902,-70.953,7.788)
N1: (-21.815,-73.625,7.957)
N2: (-21.023,-73.203,5.832)
N3: (-19.538,-73.017,7.588)
N7: (-19.952,-73.494,11.127)
N9: (-18.323,-72.935,9.695)
O5': (-16.992,-71.565,12.750)
O3': (-15.881,-69.170,9.875)
Image (generated by PyMOL):