Doublet info:
Details
Nucleotide types:
GG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3HJW:D23:D30
Extra
PDB:
ATOM 1 O3' U A 22 55.452 -13.470 42.757 1.00 46.10 O
ATOM 2 P G A 23 56.874 -13.159 42.110 1.00 47.82 P
ATOM 3 OP1 G A 23 57.849 -14.085 42.744 1.00 49.13 O
ATOM 4 OP2 G A 23 57.103 -11.699 42.195 1.00 47.86 O
ATOM 5 O5' G A 23 56.686 -13.583 40.579 1.00 49.02 O
ATOM 6 C5' G A 23 56.410 -14.928 40.189 1.00 51.26 C
ATOM 7 C4' G A 23 55.846 -14.932 38.781 1.00 53.51 C
ATOM 8 O4' G A 23 54.865 -13.869 38.669 1.00 53.05 O
ATOM 9 C3' G A 23 56.888 -14.697 37.688 1.00 55.17 C
ATOM 10 O3' G A 23 57.049 -15.875 36.918 1.00 58.78 O
ATOM 11 C2' G A 23 56.321 -13.591 36.809 1.00 54.31 C
ATOM 12 O2' G A 23 56.146 -14.024 35.473 1.00 56.26 O
ATOM 13 C1' G A 23 54.954 -13.274 37.394 1.00 51.84 C
ATOM 14 N9 G A 23 54.767 -11.833 37.490 1.00 50.03 N
ATOM 15 C8 G A 23 55.382 -10.968 38.368 1.00 49.14 C
ATOM 16 N7 G A 23 55.016 -9.726 38.204 1.00 49.08 N
ATOM 17 C5 G A 23 54.115 -9.773 37.146 1.00 48.26 C
ATOM 18 C6 G A 23 53.389 -8.735 36.519 1.00 47.99 C
ATOM 19 O6 G A 23 53.407 -7.534 36.794 1.00 49.14 O
ATOM 20 N1 G A 23 52.575 -9.198 35.482 1.00 47.36 N
ATOM 21 C2 G A 23 52.477 -10.517 35.101 1.00 47.50 C
ATOM 22 N2 G A 23 51.649 -10.779 34.086 1.00 47.79 N
ATOM 23 N3 G A 23 53.153 -11.506 35.678 1.00 48.17 N
ATOM 24 C4 G A 23 53.950 -11.064 36.691 1.00 48.86 C
ATOM 25 P A A 24 58.304 -16.110 35.947 1.00 61.08 P
ATOM 26 OP1 A A 24 59.417 -16.665 36.748 1.00 60.77 O
ATOM 27 OP2 A A 24 58.533 -14.922 35.096 1.00 61.37 O
ATOM 28 O5' A A 24 57.715 -17.270 35.025 1.00 63.55 O
TER
ATOM 1 O3' U B 29 51.958 -5.295 26.688 1.00 42.26 O
ATOM 2 P G B 30 50.896 -5.780 27.785 1.00 42.10 P
ATOM 3 OP1 G B 30 49.588 -5.913 27.112 1.00 42.02 O
ATOM 4 OP2 G B 30 51.045 -4.939 28.998 1.00 42.05 O
ATOM 5 O5' G B 30 51.508 -7.222 28.130 1.00 43.61 O
ATOM 6 C5' G B 30 51.105 -8.435 27.503 1.00 43.36 C
ATOM 7 C4' G B 30 51.220 -9.550 28.530 1.00 43.82 C
ATOM 8 O4' G B 30 52.469 -9.438 29.268 1.00 43.12 O
ATOM 9 C3' G B 30 50.121 -9.552 29.585 1.00 44.67 C
ATOM 10 O3' G B 30 49.789 -10.899 29.917 1.00 47.70 O
ATOM 11 C2' G B 30 50.775 -8.816 30.752 1.00 43.90 C
ATOM 12 O2' G B 30 50.190 -9.091 32.017 1.00 44.83 O
ATOM 13 C1' G B 30 52.203 -9.355 30.657 1.00 42.22 C
ATOM 14 N9 G B 30 53.159 -8.474 31.322 1.00 40.26 N
ATOM 15 C8 G B 30 53.215 -7.106 31.195 1.00 39.63 C
ATOM 16 N7 G B 30 54.152 -6.550 31.905 1.00 39.58 N
ATOM 17 C5 G B 30 54.756 -7.619 32.561 1.00 39.56 C
ATOM 18 C6 G B 30 55.840 -7.632 33.472 1.00 39.09 C
ATOM 19 O6 G B 30 56.488 -6.669 33.897 1.00 40.09 O
ATOM 20 N1 G B 30 56.155 -8.919 33.901 1.00 39.35 N
ATOM 21 C2 G B 30 55.495 -10.057 33.503 1.00 39.14 C
ATOM 22 N2 G B 30 55.933 -11.212 34.028 1.00 39.46 N
ATOM 23 N3 G B 30 54.481 -10.060 32.644 1.00 39.38 N
ATOM 24 C4 G B 30 54.157 -8.812 32.212 1.00 39.65 C
ATOM 25 P A B 31 48.258 -11.329 30.074 1.00 49.40 P
ATOM 26 OP1 A B 31 47.500 -10.838 28.898 1.00 48.81 O
ATOM 27 OP2 A B 31 47.853 -10.947 31.442 1.00 50.02 O
ATOM 28 O5' A B 31 48.321 -12.925 29.982 1.00 50.56 O
TER
ATOM 2 P G A 23 56.874 -13.159 42.110 1.00 47.82 P
ATOM 3 OP1 G A 23 57.849 -14.085 42.744 1.00 49.13 O
ATOM 4 OP2 G A 23 57.103 -11.699 42.195 1.00 47.86 O
ATOM 5 O5' G A 23 56.686 -13.583 40.579 1.00 49.02 O
ATOM 6 C5' G A 23 56.410 -14.928 40.189 1.00 51.26 C
ATOM 7 C4' G A 23 55.846 -14.932 38.781 1.00 53.51 C
ATOM 8 O4' G A 23 54.865 -13.869 38.669 1.00 53.05 O
ATOM 9 C3' G A 23 56.888 -14.697 37.688 1.00 55.17 C
ATOM 10 O3' G A 23 57.049 -15.875 36.918 1.00 58.78 O
ATOM 11 C2' G A 23 56.321 -13.591 36.809 1.00 54.31 C
ATOM 12 O2' G A 23 56.146 -14.024 35.473 1.00 56.26 O
ATOM 13 C1' G A 23 54.954 -13.274 37.394 1.00 51.84 C
ATOM 14 N9 G A 23 54.767 -11.833 37.490 1.00 50.03 N
ATOM 15 C8 G A 23 55.382 -10.968 38.368 1.00 49.14 C
ATOM 16 N7 G A 23 55.016 -9.726 38.204 1.00 49.08 N
ATOM 17 C5 G A 23 54.115 -9.773 37.146 1.00 48.26 C
ATOM 18 C6 G A 23 53.389 -8.735 36.519 1.00 47.99 C
ATOM 19 O6 G A 23 53.407 -7.534 36.794 1.00 49.14 O
ATOM 20 N1 G A 23 52.575 -9.198 35.482 1.00 47.36 N
ATOM 21 C2 G A 23 52.477 -10.517 35.101 1.00 47.50 C
ATOM 22 N2 G A 23 51.649 -10.779 34.086 1.00 47.79 N
ATOM 23 N3 G A 23 53.153 -11.506 35.678 1.00 48.17 N
ATOM 24 C4 G A 23 53.950 -11.064 36.691 1.00 48.86 C
ATOM 25 P A A 24 58.304 -16.110 35.947 1.00 61.08 P
ATOM 26 OP1 A A 24 59.417 -16.665 36.748 1.00 60.77 O
ATOM 27 OP2 A A 24 58.533 -14.922 35.096 1.00 61.37 O
ATOM 28 O5' A A 24 57.715 -17.270 35.025 1.00 63.55 O
TER
ATOM 1 O3' U B 29 51.958 -5.295 26.688 1.00 42.26 O
ATOM 2 P G B 30 50.896 -5.780 27.785 1.00 42.10 P
ATOM 3 OP1 G B 30 49.588 -5.913 27.112 1.00 42.02 O
ATOM 4 OP2 G B 30 51.045 -4.939 28.998 1.00 42.05 O
ATOM 5 O5' G B 30 51.508 -7.222 28.130 1.00 43.61 O
ATOM 6 C5' G B 30 51.105 -8.435 27.503 1.00 43.36 C
ATOM 7 C4' G B 30 51.220 -9.550 28.530 1.00 43.82 C
ATOM 8 O4' G B 30 52.469 -9.438 29.268 1.00 43.12 O
ATOM 9 C3' G B 30 50.121 -9.552 29.585 1.00 44.67 C
ATOM 10 O3' G B 30 49.789 -10.899 29.917 1.00 47.70 O
ATOM 11 C2' G B 30 50.775 -8.816 30.752 1.00 43.90 C
ATOM 12 O2' G B 30 50.190 -9.091 32.017 1.00 44.83 O
ATOM 13 C1' G B 30 52.203 -9.355 30.657 1.00 42.22 C
ATOM 14 N9 G B 30 53.159 -8.474 31.322 1.00 40.26 N
ATOM 15 C8 G B 30 53.215 -7.106 31.195 1.00 39.63 C
ATOM 16 N7 G B 30 54.152 -6.550 31.905 1.00 39.58 N
ATOM 17 C5 G B 30 54.756 -7.619 32.561 1.00 39.56 C
ATOM 18 C6 G B 30 55.840 -7.632 33.472 1.00 39.09 C
ATOM 19 O6 G B 30 56.488 -6.669 33.897 1.00 40.09 O
ATOM 20 N1 G B 30 56.155 -8.919 33.901 1.00 39.35 N
ATOM 21 C2 G B 30 55.495 -10.057 33.503 1.00 39.14 C
ATOM 22 N2 G B 30 55.933 -11.212 34.028 1.00 39.46 N
ATOM 23 N3 G B 30 54.481 -10.060 32.644 1.00 39.38 N
ATOM 24 C4 G B 30 54.157 -8.812 32.212 1.00 39.65 C
ATOM 25 P A B 31 48.258 -11.329 30.074 1.00 49.40 P
ATOM 26 OP1 A B 31 47.500 -10.838 28.898 1.00 48.81 O
ATOM 27 OP2 A B 31 47.853 -10.947 31.442 1.00 50.02 O
ATOM 28 O5' A B 31 48.321 -12.925 29.982 1.00 50.56 O
TER
Atoms:
OP1: (57.849,-14.085,42.744)
OP2: (57.103,-11.699,42.195)
C3': (56.888,-14.697,37.688)
C1': (54.954,-13.274,37.394)
C5': (56.410,-14.928,40.189)
O6: (53.407,-7.534,36.794)
O4': (54.865,-13.869,38.669)
C8: (55.382,-10.968,38.368)
C2: (52.477,-10.517,35.101)
C6: (53.389,-8.735,36.519)
C5: (54.115,-9.773,37.146)
C4: (53.950,-11.064,36.691)
P: (56.874,-13.159,42.110)
C4': (55.846,-14.932,38.781)
C2': (56.321,-13.591,36.809)
O2': (56.146,-14.024,35.473)
N1: (52.575,-9.198,35.482)
N2: (51.649,-10.779,34.086)
N3: (53.153,-11.506,35.678)
N7: (55.016,-9.726,38.204)
N9: (54.767,-11.833,37.490)
O5': (56.686,-13.583,40.579)
O3': (57.049,-15.875,36.918)
OP2: (57.103,-11.699,42.195)
C3': (56.888,-14.697,37.688)
C1': (54.954,-13.274,37.394)
C5': (56.410,-14.928,40.189)
O6: (53.407,-7.534,36.794)
O4': (54.865,-13.869,38.669)
C8: (55.382,-10.968,38.368)
C2: (52.477,-10.517,35.101)
C6: (53.389,-8.735,36.519)
C5: (54.115,-9.773,37.146)
C4: (53.950,-11.064,36.691)
P: (56.874,-13.159,42.110)
C4': (55.846,-14.932,38.781)
C2': (56.321,-13.591,36.809)
O2': (56.146,-14.024,35.473)
N1: (52.575,-9.198,35.482)
N2: (51.649,-10.779,34.086)
N3: (53.153,-11.506,35.678)
N7: (55.016,-9.726,38.204)
N9: (54.767,-11.833,37.490)
O5': (56.686,-13.583,40.579)
O3': (57.049,-15.875,36.918)
OP1: (49.588,-5.913,27.112)
OP2: (51.045,-4.939,28.998)
C3': (50.121,-9.552,29.585)
C1': (52.203,-9.355,30.657)
C5': (51.105,-8.435,27.503)
O6: (56.488,-6.669,33.897)
O4': (52.469,-9.438,29.268)
C8: (53.215,-7.106,31.195)
C2: (55.495,-10.057,33.503)
C6: (55.840,-7.632,33.472)
C5: (54.756,-7.619,32.561)
C4: (54.157,-8.812,32.212)
P: (50.896,-5.780,27.785)
C4': (51.220,-9.550,28.530)
C2': (50.775,-8.816,30.752)
O2': (50.190,-9.091,32.017)
N1: (56.155,-8.919,33.901)
N2: (55.933,-11.212,34.028)
N3: (54.481,-10.060,32.644)
N7: (54.152,-6.550,31.905)
N9: (53.159,-8.474,31.322)
O5': (51.508,-7.222,28.130)
O3': (49.789,-10.899,29.917)
OP2: (51.045,-4.939,28.998)
C3': (50.121,-9.552,29.585)
C1': (52.203,-9.355,30.657)
C5': (51.105,-8.435,27.503)
O6: (56.488,-6.669,33.897)
O4': (52.469,-9.438,29.268)
C8: (53.215,-7.106,31.195)
C2: (55.495,-10.057,33.503)
C6: (55.840,-7.632,33.472)
C5: (54.756,-7.619,32.561)
C4: (54.157,-8.812,32.212)
P: (50.896,-5.780,27.785)
C4': (51.220,-9.550,28.530)
C2': (50.775,-8.816,30.752)
O2': (50.190,-9.091,32.017)
N1: (56.155,-8.919,33.901)
N2: (55.933,-11.212,34.028)
N3: (54.481,-10.060,32.644)
N7: (54.152,-6.550,31.905)
N9: (53.159,-8.474,31.322)
O5': (51.508,-7.222,28.130)
O3': (49.789,-10.899,29.917)
Image (generated by PyMOL):