ClaRNA

Doublet info:

Details

Nucleotide types: GG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3NMU:D14:D27

Extra

PDB:
ATOM 1 O3' U A 13 20.583 1.299 -23.279 1.00110.71 O
ATOM 2 P G A 14 21.161 -0.092 -23.835 1.00111.41 P
ATOM 3 OP1 G A 14 20.010 -0.881 -24.339 1.00113.47 O
ATOM 4 OP2 G A 14 22.021 -0.676 -22.765 1.00 96.62 O
ATOM 5 O5' G A 14 22.056 0.382 -25.054 1.00109.05 O
ATOM 6 C5' G A 14 21.467 0.934 -26.224 1.00106.79 C
ATOM 7 C4' G A 14 22.410 0.843 -27.385 1.00104.96 C
ATOM 8 O4' G A 14 23.636 1.528 -27.022 1.00106.62 O
ATOM 9 C3' G A 14 22.813 -0.585 -27.751 1.00107.89 C
ATOM 10 O3' G A 14 23.053 -0.683 -29.156 1.00107.88 O
ATOM 11 C2' G A 14 24.114 -0.783 -26.982 1.00102.10 C
ATOM 12 O2' G A 14 24.994 -1.736 -27.546 1.00101.58 O
ATOM 13 C1' G A 14 24.722 0.620 -26.995 1.00105.87 C
ATOM 14 N9 G A 14 25.547 0.903 -25.812 1.00102.67 N
ATOM 15 C8 G A 14 25.300 0.411 -24.553 1.00101.36 C
ATOM 16 N7 G A 14 26.199 0.758 -23.670 1.00100.32 N
ATOM 17 C5 G A 14 27.117 1.517 -24.384 1.00 96.19 C
ATOM 18 C6 G A 14 28.311 2.155 -23.948 1.00 93.15 C
ATOM 19 O6 G A 14 28.799 2.171 -22.808 1.00 89.91 O
ATOM 20 N1 G A 14 28.947 2.816 -25.002 1.00 89.16 N
ATOM 21 C2 G A 14 28.491 2.855 -26.304 1.00 93.78 C
ATOM 22 N2 G A 14 29.235 3.535 -27.192 1.00 94.85 N
ATOM 23 N3 G A 14 27.380 2.264 -26.718 1.00 97.34 N
ATOM 24 C4 G A 14 26.740 1.611 -25.715 1.00 98.66 C
ATOM 25 P A A 15 22.616 -2.011 -29.959 1.00108.96 P
ATOM 26 OP1 A A 15 21.192 -2.271 -29.642 1.00103.93 O
ATOM 27 OP2 A A 15 23.619 -3.067 -29.649 1.00101.49 O
ATOM 28 O5' A A 15 22.759 -1.552 -31.478 1.00110.72 O
TER

ATOM 1 O3' U B 26 37.841 2.458 -27.954 1.00102.38 O
ATOM 2 P G B 27 37.033 3.379 -26.904 1.00107.11 P
ATOM 3 OP1 G B 27 37.975 4.426 -26.433 1.00 94.41 O
ATOM 4 OP2 G B 27 36.409 2.487 -25.894 1.00 96.67 O
ATOM 5 O5' G B 27 35.910 4.027 -27.819 1.00 99.90 O
ATOM 6 C5' G B 27 35.593 3.469 -29.085 1.00 94.67 C
ATOM 7 C4' G B 27 34.131 3.641 -29.411 1.00 99.96 C
ATOM 8 O4' G B 27 33.412 2.443 -29.018 1.00 95.47 O
ATOM 9 C3' G B 27 33.439 4.799 -28.702 1.00100.61 C
ATOM 10 O3' G B 27 32.397 5.307 -29.544 1.00102.51 O
ATOM 11 C2' G B 27 32.826 4.113 -27.481 1.00 92.58 C
ATOM 12 O2' G B 27 31.732 4.795 -26.916 1.00 90.70 O
ATOM 13 C1' G B 27 32.411 2.773 -28.074 1.00 90.92 C
ATOM 14 N9 G B 27 32.341 1.674 -27.116 1.00 86.37 N
ATOM 15 C8 G B 27 33.298 1.268 -26.223 1.00 89.79 C
ATOM 16 N7 G B 27 32.954 0.208 -25.547 1.00 82.58 N
ATOM 17 C5 G B 27 31.707 -0.100 -26.051 1.00 83.02 C
ATOM 18 C6 G B 27 30.836 -1.144 -25.707 1.00 88.37 C
ATOM 19 O6 G B 27 31.019 -2.016 -24.858 1.00 90.92 O
ATOM 20 N1 G B 27 29.666 -1.107 -26.455 1.00 87.97 N
ATOM 21 C2 G B 27 29.374 -0.177 -27.412 1.00 88.52 C
ATOM 22 N2 G B 27 28.189 -0.304 -28.023 1.00 90.61 N
ATOM 23 N3 G B 27 30.183 0.809 -27.742 1.00 89.08 N
ATOM 24 C4 G B 27 31.318 0.780 -27.022 1.00 85.11 C
ATOM 25 P A B 28 32.218 6.894 -29.749 1.00 97.80 P
ATOM 26 OP1 A B 28 33.543 7.437 -30.122 1.00101.02 O
ATOM 27 OP2 A B 28 31.549 7.412 -28.536 1.00101.02 O
ATOM 28 O5' A B 28 31.223 6.989 -30.986 1.00100.13 O
TER

Atoms:
OP1: (20.010,-0.881,-24.339)
OP2: (22.021,-0.676,-22.765)
C3': (22.813,-0.585,-27.751)
C1': (24.722,0.620,-26.995)
C5': (21.467,0.934,-26.224)
O6: (28.799,2.171,-22.808)
O4': (23.636,1.528,-27.022)
C8: (25.300,0.411,-24.553)
C2: (28.491,2.855,-26.304)
C6: (28.311,2.155,-23.948)
C5: (27.117,1.517,-24.384)
C4: (26.740,1.611,-25.715)
P: (21.161,-0.092,-23.835)
C4': (22.410,0.843,-27.385)
C2': (24.114,-0.783,-26.982)
O2': (24.994,-1.736,-27.546)
N1: (28.947,2.816,-25.002)
N2: (29.235,3.535,-27.192)
N3: (27.380,2.264,-26.718)
N7: (26.199,0.758,-23.670)
N9: (25.547,0.903,-25.812)
O5': (22.056,0.382,-25.054)
O3': (23.053,-0.683,-29.156)
OP1: (37.975,4.426,-26.433)
OP2: (36.409,2.487,-25.894)
C3': (33.439,4.799,-28.702)
C1': (32.411,2.773,-28.074)
C5': (35.593,3.469,-29.085)
O6: (31.019,-2.016,-24.858)
O4': (33.412,2.443,-29.018)
C8: (33.298,1.268,-26.223)
C2: (29.374,-0.177,-27.412)
C6: (30.836,-1.144,-25.707)
C5: (31.707,-0.100,-26.051)
C4: (31.318,0.780,-27.022)
P: (37.033,3.379,-26.904)
C4': (34.131,3.641,-29.411)
C2': (32.826,4.113,-27.481)
O2': (31.732,4.795,-26.916)
N1: (29.666,-1.107,-26.455)
N2: (28.189,-0.304,-28.023)
N3: (30.183,0.809,-27.742)
N7: (32.954,0.208,-25.547)
N9: (32.341,1.674,-27.116)
O5': (35.910,4.027,-27.819)
O3': (32.397,5.307,-29.544)
Image (generated by PyMOL):
PyMOL image
show in jmol