Doublet info:
Details
Nucleotide types:
GG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3NVI:E4:E17
Extra
PDB:
ATOM 1 O3' U A 3 -6.319 -12.906 -6.645 1.00 82.17 O
ATOM 2 P G A 4 -5.112 -12.689 -7.683 1.00 97.22 P
ATOM 3 OP1 G A 4 -5.649 -12.993 -9.034 1.00 99.76 O
ATOM 4 OP2 G A 4 -3.950 -13.472 -7.183 1.00 87.52 O
ATOM 5 O5' G A 4 -4.810 -11.132 -7.561 1.00 90.60 O
ATOM 6 C5' G A 4 -5.833 -10.213 -7.194 1.00 89.17 C
ATOM 7 C4' G A 4 -5.247 -8.985 -6.552 1.00 87.21 C
ATOM 8 O4' G A 4 -4.730 -9.352 -5.240 1.00 87.57 O
ATOM 9 C3' G A 4 -4.076 -8.374 -7.317 1.00 84.41 C
ATOM 10 O3' G A 4 -4.085 -6.955 -7.180 1.00 90.49 O
ATOM 11 C2' G A 4 -2.864 -8.956 -6.606 1.00 81.55 C
ATOM 12 O2' G A 4 -1.686 -8.182 -6.709 1.00 84.24 O
ATOM 13 C1' G A 4 -3.354 -9.051 -5.166 1.00 81.82 C
ATOM 14 N9 G A 4 -2.664 -10.094 -4.397 1.00 75.40 N
ATOM 15 C8 G A 4 -2.238 -11.301 -4.894 1.00 73.18 C
ATOM 16 N7 G A 4 -1.561 -12.004 -4.037 1.00 72.83 N
ATOM 17 C5 G A 4 -1.511 -11.187 -2.914 1.00 71.81 C
ATOM 18 C6 G A 4 -0.897 -11.413 -1.661 1.00 68.86 C
ATOM 19 O6 G A 4 -0.274 -12.421 -1.294 1.00 78.54 O
ATOM 20 N1 G A 4 -1.075 -10.332 -0.803 1.00 65.59 N
ATOM 21 C2 G A 4 -1.757 -9.179 -1.114 1.00 64.18 C
ATOM 22 N2 G A 4 -1.813 -8.260 -0.149 1.00 62.89 N
ATOM 23 N3 G A 4 -2.333 -8.946 -2.275 1.00 60.95 N
ATOM 24 C4 G A 4 -2.175 -9.995 -3.117 1.00 70.94 C
ATOM 25 P A A 5 -3.888 -6.029 -8.484 1.00 97.97 P
ATOM 26 OP1 A A 5 -4.890 -6.493 -9.499 1.00 83.09 O
ATOM 27 OP2 A A 5 -2.432 -6.062 -8.835 1.00 85.42 O
ATOM 28 O5' A A 5 -4.280 -4.582 -7.952 1.00 87.24 O
TER
ATOM 1 O3' U B 16 5.404 -6.008 4.618 1.00 71.61 O
ATOM 2 P G B 17 4.059 -6.882 4.788 1.00 68.24 P
ATOM 3 OP1 G B 17 3.537 -6.642 6.166 1.00 71.85 O
ATOM 4 OP2 G B 17 4.404 -8.258 4.400 1.00 75.34 O
ATOM 5 O5' G B 17 3.064 -6.247 3.713 1.00 73.62 O
ATOM 6 C5' G B 17 2.594 -4.900 3.827 1.00 69.98 C
ATOM 7 C4' G B 17 1.287 -4.708 3.086 1.00 72.14 C
ATOM 8 O4' G B 17 1.474 -5.064 1.694 1.00 67.76 O
ATOM 9 C3' G B 17 0.134 -5.574 3.575 1.00 69.75 C
ATOM 10 O3' G B 17 -1.099 -4.918 3.305 1.00 71.33 O
ATOM 11 C2' G B 17 0.252 -6.800 2.693 1.00 65.92 C
ATOM 12 O2' G B 17 -0.932 -7.560 2.574 1.00 69.36 O
ATOM 13 C1' G B 17 0.668 -6.182 1.365 1.00 63.93 C
ATOM 14 N9 G B 17 1.482 -7.079 0.552 1.00 69.21 N
ATOM 15 C8 G B 17 2.552 -7.761 1.058 1.00 63.26 C
ATOM 16 N7 G B 17 3.135 -8.493 0.165 1.00 64.69 N
ATOM 17 C5 G B 17 2.418 -8.279 -0.994 1.00 62.06 C
ATOM 18 C6 G B 17 2.622 -8.830 -2.280 1.00 71.18 C
ATOM 19 O6 G B 17 3.513 -9.646 -2.622 1.00 73.87 O
ATOM 20 N1 G B 17 1.666 -8.346 -3.180 1.00 70.42 N
ATOM 21 C2 G B 17 0.662 -7.462 -2.869 1.00 66.59 C
ATOM 22 N2 G B 17 -0.172 -7.120 -3.863 1.00 63.60 N
ATOM 23 N3 G B 17 0.479 -6.958 -1.662 1.00 63.61 N
ATOM 24 C4 G B 17 1.383 -7.408 -0.780 1.00 62.91 C
ATOM 25 P A B 18 -2.309 -5.065 4.341 1.00 72.22 P
ATOM 26 OP1 A B 18 -1.736 -4.862 5.698 1.00 80.27 O
ATOM 27 OP2 A B 18 -2.986 -6.328 4.041 1.00 66.92 O
ATOM 28 O5' A B 18 -3.273 -3.861 3.965 1.00 79.99 O
TER
ATOM 2 P G A 4 -5.112 -12.689 -7.683 1.00 97.22 P
ATOM 3 OP1 G A 4 -5.649 -12.993 -9.034 1.00 99.76 O
ATOM 4 OP2 G A 4 -3.950 -13.472 -7.183 1.00 87.52 O
ATOM 5 O5' G A 4 -4.810 -11.132 -7.561 1.00 90.60 O
ATOM 6 C5' G A 4 -5.833 -10.213 -7.194 1.00 89.17 C
ATOM 7 C4' G A 4 -5.247 -8.985 -6.552 1.00 87.21 C
ATOM 8 O4' G A 4 -4.730 -9.352 -5.240 1.00 87.57 O
ATOM 9 C3' G A 4 -4.076 -8.374 -7.317 1.00 84.41 C
ATOM 10 O3' G A 4 -4.085 -6.955 -7.180 1.00 90.49 O
ATOM 11 C2' G A 4 -2.864 -8.956 -6.606 1.00 81.55 C
ATOM 12 O2' G A 4 -1.686 -8.182 -6.709 1.00 84.24 O
ATOM 13 C1' G A 4 -3.354 -9.051 -5.166 1.00 81.82 C
ATOM 14 N9 G A 4 -2.664 -10.094 -4.397 1.00 75.40 N
ATOM 15 C8 G A 4 -2.238 -11.301 -4.894 1.00 73.18 C
ATOM 16 N7 G A 4 -1.561 -12.004 -4.037 1.00 72.83 N
ATOM 17 C5 G A 4 -1.511 -11.187 -2.914 1.00 71.81 C
ATOM 18 C6 G A 4 -0.897 -11.413 -1.661 1.00 68.86 C
ATOM 19 O6 G A 4 -0.274 -12.421 -1.294 1.00 78.54 O
ATOM 20 N1 G A 4 -1.075 -10.332 -0.803 1.00 65.59 N
ATOM 21 C2 G A 4 -1.757 -9.179 -1.114 1.00 64.18 C
ATOM 22 N2 G A 4 -1.813 -8.260 -0.149 1.00 62.89 N
ATOM 23 N3 G A 4 -2.333 -8.946 -2.275 1.00 60.95 N
ATOM 24 C4 G A 4 -2.175 -9.995 -3.117 1.00 70.94 C
ATOM 25 P A A 5 -3.888 -6.029 -8.484 1.00 97.97 P
ATOM 26 OP1 A A 5 -4.890 -6.493 -9.499 1.00 83.09 O
ATOM 27 OP2 A A 5 -2.432 -6.062 -8.835 1.00 85.42 O
ATOM 28 O5' A A 5 -4.280 -4.582 -7.952 1.00 87.24 O
TER
ATOM 1 O3' U B 16 5.404 -6.008 4.618 1.00 71.61 O
ATOM 2 P G B 17 4.059 -6.882 4.788 1.00 68.24 P
ATOM 3 OP1 G B 17 3.537 -6.642 6.166 1.00 71.85 O
ATOM 4 OP2 G B 17 4.404 -8.258 4.400 1.00 75.34 O
ATOM 5 O5' G B 17 3.064 -6.247 3.713 1.00 73.62 O
ATOM 6 C5' G B 17 2.594 -4.900 3.827 1.00 69.98 C
ATOM 7 C4' G B 17 1.287 -4.708 3.086 1.00 72.14 C
ATOM 8 O4' G B 17 1.474 -5.064 1.694 1.00 67.76 O
ATOM 9 C3' G B 17 0.134 -5.574 3.575 1.00 69.75 C
ATOM 10 O3' G B 17 -1.099 -4.918 3.305 1.00 71.33 O
ATOM 11 C2' G B 17 0.252 -6.800 2.693 1.00 65.92 C
ATOM 12 O2' G B 17 -0.932 -7.560 2.574 1.00 69.36 O
ATOM 13 C1' G B 17 0.668 -6.182 1.365 1.00 63.93 C
ATOM 14 N9 G B 17 1.482 -7.079 0.552 1.00 69.21 N
ATOM 15 C8 G B 17 2.552 -7.761 1.058 1.00 63.26 C
ATOM 16 N7 G B 17 3.135 -8.493 0.165 1.00 64.69 N
ATOM 17 C5 G B 17 2.418 -8.279 -0.994 1.00 62.06 C
ATOM 18 C6 G B 17 2.622 -8.830 -2.280 1.00 71.18 C
ATOM 19 O6 G B 17 3.513 -9.646 -2.622 1.00 73.87 O
ATOM 20 N1 G B 17 1.666 -8.346 -3.180 1.00 70.42 N
ATOM 21 C2 G B 17 0.662 -7.462 -2.869 1.00 66.59 C
ATOM 22 N2 G B 17 -0.172 -7.120 -3.863 1.00 63.60 N
ATOM 23 N3 G B 17 0.479 -6.958 -1.662 1.00 63.61 N
ATOM 24 C4 G B 17 1.383 -7.408 -0.780 1.00 62.91 C
ATOM 25 P A B 18 -2.309 -5.065 4.341 1.00 72.22 P
ATOM 26 OP1 A B 18 -1.736 -4.862 5.698 1.00 80.27 O
ATOM 27 OP2 A B 18 -2.986 -6.328 4.041 1.00 66.92 O
ATOM 28 O5' A B 18 -3.273 -3.861 3.965 1.00 79.99 O
TER
Atoms:
OP1: (-5.649,-12.993,-9.034)
OP2: (-3.950,-13.472,-7.183)
C3': (-4.076,-8.374,-7.317)
C1': (-3.354,-9.051,-5.166)
C5': (-5.833,-10.213,-7.194)
O6: (-0.274,-12.421,-1.294)
O4': (-4.730,-9.352,-5.240)
C8: (-2.238,-11.301,-4.894)
C2: (-1.757,-9.179,-1.114)
C6: (-0.897,-11.413,-1.661)
C5: (-1.511,-11.187,-2.914)
C4: (-2.175,-9.995,-3.117)
P: (-5.112,-12.689,-7.683)
C4': (-5.247,-8.985,-6.552)
C2': (-2.864,-8.956,-6.606)
O2': (-1.686,-8.182,-6.709)
N1: (-1.075,-10.332,-0.803)
N2: (-1.813,-8.260,-0.149)
N3: (-2.333,-8.946,-2.275)
N7: (-1.561,-12.004,-4.037)
N9: (-2.664,-10.094,-4.397)
O5': (-4.810,-11.132,-7.561)
O3': (-4.085,-6.955,-7.180)
OP2: (-3.950,-13.472,-7.183)
C3': (-4.076,-8.374,-7.317)
C1': (-3.354,-9.051,-5.166)
C5': (-5.833,-10.213,-7.194)
O6: (-0.274,-12.421,-1.294)
O4': (-4.730,-9.352,-5.240)
C8: (-2.238,-11.301,-4.894)
C2: (-1.757,-9.179,-1.114)
C6: (-0.897,-11.413,-1.661)
C5: (-1.511,-11.187,-2.914)
C4: (-2.175,-9.995,-3.117)
P: (-5.112,-12.689,-7.683)
C4': (-5.247,-8.985,-6.552)
C2': (-2.864,-8.956,-6.606)
O2': (-1.686,-8.182,-6.709)
N1: (-1.075,-10.332,-0.803)
N2: (-1.813,-8.260,-0.149)
N3: (-2.333,-8.946,-2.275)
N7: (-1.561,-12.004,-4.037)
N9: (-2.664,-10.094,-4.397)
O5': (-4.810,-11.132,-7.561)
O3': (-4.085,-6.955,-7.180)
OP1: (3.537,-6.642,6.166)
OP2: (4.404,-8.258,4.400)
C3': (0.134,-5.574,3.575)
C1': (0.668,-6.182,1.365)
C5': (2.594,-4.900,3.827)
O6: (3.513,-9.646,-2.622)
O4': (1.474,-5.064,1.694)
C8: (2.552,-7.761,1.058)
C2: (0.662,-7.462,-2.869)
C6: (2.622,-8.830,-2.280)
C5: (2.418,-8.279,-0.994)
C4: (1.383,-7.408,-0.780)
P: (4.059,-6.882,4.788)
C4': (1.287,-4.708,3.086)
C2': (0.252,-6.800,2.693)
O2': (-0.932,-7.560,2.574)
N1: (1.666,-8.346,-3.180)
N2: (-0.172,-7.120,-3.863)
N3: (0.479,-6.958,-1.662)
N7: (3.135,-8.493,0.165)
N9: (1.482,-7.079,0.552)
O5': (3.064,-6.247,3.713)
O3': (-1.099,-4.918,3.305)
OP2: (4.404,-8.258,4.400)
C3': (0.134,-5.574,3.575)
C1': (0.668,-6.182,1.365)
C5': (2.594,-4.900,3.827)
O6: (3.513,-9.646,-2.622)
O4': (1.474,-5.064,1.694)
C8: (2.552,-7.761,1.058)
C2: (0.662,-7.462,-2.869)
C6: (2.622,-8.830,-2.280)
C5: (2.418,-8.279,-0.994)
C4: (1.383,-7.408,-0.780)
P: (4.059,-6.882,4.788)
C4': (1.287,-4.708,3.086)
C2': (0.252,-6.800,2.693)
O2': (-0.932,-7.560,2.574)
N1: (1.666,-8.346,-3.180)
N2: (-0.172,-7.120,-3.863)
N3: (0.479,-6.958,-1.662)
N7: (3.135,-8.493,0.165)
N9: (1.482,-7.079,0.552)
O5': (3.064,-6.247,3.713)
O3': (-1.099,-4.918,3.305)
Image (generated by PyMOL):