ClaRNA

Doublet info:

Details

Nucleotide types: GG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3OHD:A917:A1310

Extra

PDB:
ATOM 1 O3' G A 916 125.109-105.537-221.459 1.00153.99 O
ATOM 2 P G A 917 123.663-105.895-220.831 1.00157.47 P
ATOM 3 OP1 G A 917 123.895-106.845-219.712 1.00162.75 O
ATOM 4 OP2 G A 917 122.783-106.317-221.947 1.00169.22 O
ATOM 5 O5' G A 917 123.173-104.494-220.260 1.00161.36 O
ATOM 6 C5' G A 917 124.017-103.716-219.426 1.00161.46 C
ATOM 7 C4' G A 917 123.457-102.333-219.192 1.00161.87 C
ATOM 8 O4' G A 917 123.764-101.471-220.316 1.00162.21 O
ATOM 9 C3' G A 917 121.946-102.228-219.047 1.00159.10 C
ATOM 10 O3' G A 917 121.490-102.598-217.754 1.00157.12 O
ATOM 11 C2' G A 917 121.682-100.761-219.393 1.00161.44 C
ATOM 12 O2' G A 917 121.919 -99.927-218.268 1.00158.11 O
ATOM 13 C1' G A 917 122.768-100.478-220.439 1.00162.70 C
ATOM 14 N9 G A 917 122.246-100.489-221.819 1.00183.84 N
ATOM 15 C8 G A 917 122.917-100.929-222.933 1.00184.41 C
ATOM 16 N7 G A 917 122.226-100.809-224.032 1.00186.07 N
ATOM 17 C5 G A 917 121.030-100.245-223.621 1.00186.92 C
ATOM 18 C6 G A 917 119.889 -99.883-224.379 1.00188.79 C
ATOM 19 O6 G A 917 119.713 -99.997-225.598 1.00188.98 O
ATOM 20 N1 G A 917 118.890 -99.343-223.573 1.00188.56 N
ATOM 21 C2 G A 917 118.979 -99.171-222.214 1.00186.41 C
ATOM 22 N2 G A 917 117.908 -98.632-221.616 1.00184.64 N
ATOM 23 N3 G A 917 120.039 -99.505-221.497 1.00186.61 N
ATOM 24 C4 G A 917 121.023-100.033-222.258 1.00185.79 C
ATOM 25 P A A 918 120.425-103.791-217.571 1.00167.24 P
ATOM 26 OP1 A A 918 120.395-104.135-216.127 1.00167.95 O
ATOM 27 OP2 A A 918 120.781-104.850-218.548 1.00169.80 O
ATOM 28 O5' A A 918 119.050-103.101-217.990 1.00172.28 O
TER

ATOM 1 O3' A B1309 114.059 -97.051-214.803 1.00188.57 O
ATOM 2 P G B1310 114.790 -95.782-215.483 1.00180.58 P
ATOM 3 OP1 G B1310 115.586 -95.117-214.427 1.00195.41 O
ATOM 4 OP2 G B1310 113.750 -94.997-216.187 1.00192.99 O
ATOM 5 O5' G B1310 115.762 -96.464-216.537 1.00160.04 O
ATOM 6 C5' G B1310 116.270 -95.734-217.638 1.00158.57 C
ATOM 7 C4' G B1310 115.902 -96.392-218.941 1.00161.10 C
ATOM 8 O4' G B1310 114.644 -97.099-218.787 1.00165.64 O
ATOM 9 C3' G B1310 115.672 -95.450-220.114 1.00164.49 C
ATOM 10 O3' G B1310 116.875 -95.090-220.775 1.00163.31 O
ATOM 11 C2' G B1310 114.695 -96.226-220.992 1.00165.61 C
ATOM 12 O2' G B1310 115.378 -97.203-221.765 1.00164.85 O
ATOM 13 C1' G B1310 113.851 -96.947-219.943 1.00166.90 C
ATOM 14 N9 G B1310 112.645 -96.184-219.575 1.00187.90 N
ATOM 15 C8 G B1310 112.254 -95.898-218.289 1.00190.42 C
ATOM 16 N7 G B1310 111.148 -95.216-218.220 1.00193.35 N
ATOM 17 C5 G B1310 110.782 -95.045-219.548 1.00192.92 C
ATOM 18 C6 G B1310 109.658 -94.379-220.092 1.00194.21 C
ATOM 19 O6 G B1310 108.747 -93.799-219.482 1.00194.54 O
ATOM 20 N1 G B1310 109.663 -94.436-221.484 1.00193.17 N
ATOM 21 C2 G B1310 110.621 -95.055-222.250 1.00190.50 C
ATOM 22 N2 G B1310 110.438 -95.000-223.573 1.00188.61 N
ATOM 23 N3 G B1310 111.675 -95.681-221.755 1.00189.82 N
ATOM 24 C4 G B1310 111.692 -95.638-220.404 1.00190.48 C
ATOM 25 P C B1311 117.727 -93.827-220.268 1.00177.19 P
ATOM 26 OP1 C B1311 119.144 -94.252-220.206 1.00190.39 O
ATOM 27 OP2 C B1311 117.075 -93.329-219.033 1.00193.70 O
ATOM 28 O5' C B1311 117.529 -92.775-221.443 1.00188.00 O
TER

Atoms:
OP1: (123.895,-106.845,-219.712)
OP2: (122.783,-106.317,-221.947)
C3': (121.946,-102.228,-219.047)
C1': (122.768,-100.478,-220.439)
C5': (124.017,-103.716,-219.426)
O6: (119.713,-99.997,-225.598)
O4': (123.764,-101.471,-220.316)
C8: (122.917,-100.929,-222.933)
C2: (118.979,-99.171,-222.214)
C6: (119.889,-99.883,-224.379)
C5: (121.030,-100.245,-223.621)
C4: (121.023,-100.033,-222.258)
P: (123.663,-105.895,-220.831)
C4': (123.457,-102.333,-219.192)
C2': (121.682,-100.761,-219.393)
O2': (121.919,-99.927,-218.268)
N1: (118.890,-99.343,-223.573)
N2: (117.908,-98.632,-221.616)
N3: (120.039,-99.505,-221.497)
N7: (122.226,-100.809,-224.032)
N9: (122.246,-100.489,-221.819)
O5': (123.173,-104.494,-220.260)
O3': (121.490,-102.598,-217.754)
OP1: (115.586,-95.117,-214.427)
OP2: (113.750,-94.997,-216.187)
C3': (115.672,-95.450,-220.114)
C1': (113.851,-96.947,-219.943)
C5': (116.270,-95.734,-217.638)
O6: (108.747,-93.799,-219.482)
O4': (114.644,-97.099,-218.787)
C8: (112.254,-95.898,-218.289)
C2: (110.621,-95.055,-222.250)
C6: (109.658,-94.379,-220.092)
C5: (110.782,-95.045,-219.548)
C4: (111.692,-95.638,-220.404)
P: (114.790,-95.782,-215.483)
C4': (115.902,-96.392,-218.941)
C2': (114.695,-96.226,-220.992)
O2': (115.378,-97.203,-221.765)
N1: (109.663,-94.436,-221.484)
N2: (110.438,-95.000,-223.573)
N3: (111.675,-95.681,-221.755)
N7: (111.148,-95.216,-218.220)
N9: (112.645,-96.184,-219.575)
O5': (115.762,-96.464,-216.537)
O3': (116.875,-95.090,-220.775)
Image (generated by PyMOL):
PyMOL image
show in jmol