Doublet info:
Details
Nucleotide types:
GG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8N:A1062:A1188
Extra
PDB:
ATOM 1 O3' C A1061 -116.884 41.306 -5.015 1.00 17.34 O
ATOM 2 P G A1062 -116.721 42.831 -4.551 1.00 14.51 P
ATOM 3 OP1 G A1062 -116.095 43.575 -5.697 1.00 14.51 O
ATOM 4 OP2 G A1062 -116.023 42.827 -3.208 1.00 14.51 O
ATOM 5 O5' G A1062 -118.221 43.297 -4.364 1.00 14.51 O
ATOM 6 C5' G A1062 -118.506 44.589 -3.861 1.00 14.51 C
ATOM 7 C4' G A1062 -119.629 45.200 -4.612 1.00 14.51 C
ATOM 8 O4' G A1062 -119.135 45.660 -5.897 1.00 14.51 O
ATOM 9 C3' G A1062 -120.762 44.241 -4.917 1.00 14.51 C
ATOM 10 O3' G A1062 -121.998 44.951 -4.873 1.00 14.51 O
ATOM 11 C2' G A1062 -120.447 43.810 -6.348 1.00 14.51 C
ATOM 12 O2' G A1062 -121.550 43.330 -7.083 1.00 14.51 O
ATOM 13 C1' G A1062 -119.916 45.103 -6.920 1.00 14.51 C
ATOM 14 N9 G A1062 -119.085 44.957 -8.116 1.00 14.40 N
ATOM 15 C8 G A1062 -117.801 44.504 -8.246 1.00 14.40 C
ATOM 16 N7 G A1062 -117.387 44.547 -9.487 1.00 14.40 N
ATOM 17 C5 G A1062 -118.443 45.066 -10.215 1.00 14.40 C
ATOM 18 C6 G A1062 -118.599 45.364 -11.600 1.00 14.40 C
ATOM 19 O6 G A1062 -117.822 45.229 -12.539 1.00 14.40 O
ATOM 20 N1 G A1062 -119.835 45.885 -11.908 1.00 14.40 N
ATOM 21 C2 G A1062 -120.816 46.093 -10.981 1.00 14.40 C
ATOM 22 N2 G A1062 -121.946 46.618 -11.477 1.00 14.40 N
ATOM 23 N3 G A1062 -120.703 45.827 -9.679 1.00 14.40 N
ATOM 24 C4 G A1062 -119.493 45.325 -9.377 1.00 14.40 C
ATOM 25 P U A1063 -122.983 44.801 -3.611 1.00 46.41 P
ATOM 26 OP1 U A1063 -122.145 44.488 -2.423 1.00 46.41 O
ATOM 27 OP2 U A1063 -124.048 43.856 -4.009 1.00 46.41 O
ATOM 28 O5' U A1063 -123.594 46.255 -3.464 1.00 46.41 O
TER
ATOM 1 O3' U B1187 -129.256 52.100 -13.648 1.00 24.32 O
ATOM 2 P G B1188 -128.397 50.778 -13.881 1.00 32.58 P
ATOM 3 OP1 G B1188 -128.032 50.740 -15.321 1.00 32.58 O
ATOM 4 OP2 G B1188 -129.174 49.656 -13.303 1.00 32.58 O
ATOM 5 O5' G B1188 -127.105 51.044 -12.999 1.00 32.58 O
ATOM 6 C5' G B1188 -125.886 51.461 -13.590 1.00 32.58 C
ATOM 7 C4' G B1188 -124.735 50.621 -13.108 1.00 32.58 C
ATOM 8 O4' G B1188 -125.010 50.171 -11.749 1.00 32.58 O
ATOM 9 C3' G B1188 -124.475 49.345 -13.908 1.00 32.58 C
ATOM 10 O3' G B1188 -123.108 48.982 -13.740 1.00 32.58 O
ATOM 11 C2' G B1188 -125.330 48.344 -13.162 1.00 32.58 C
ATOM 12 O2' G B1188 -125.007 46.998 -13.413 1.00 32.58 O
ATOM 13 C1' G B1188 -125.004 48.754 -11.732 1.00 32.58 C
ATOM 14 N9 G B1188 -125.950 48.295 -10.724 1.00 33.91 N
ATOM 15 C8 G B1188 -127.244 48.702 -10.529 1.00 33.91 C
ATOM 16 N7 G B1188 -127.825 48.120 -9.515 1.00 33.91 N
ATOM 17 C5 G B1188 -126.835 47.298 -9.022 1.00 33.91 C
ATOM 18 C6 G B1188 -126.892 46.429 -7.925 1.00 33.91 C
ATOM 19 O6 G B1188 -127.883 46.253 -7.201 1.00 33.91 O
ATOM 20 N1 G B1188 -125.679 45.763 -7.725 1.00 33.91 N
ATOM 21 C2 G B1188 -124.561 45.925 -8.505 1.00 33.91 C
ATOM 22 N2 G B1188 -123.478 45.199 -8.166 1.00 33.91 N
ATOM 23 N3 G B1188 -124.517 46.743 -9.548 1.00 33.91 N
ATOM 24 C4 G B1188 -125.676 47.391 -9.740 1.00 33.91 C
ATOM 25 P A B1189 -122.209 48.522 -14.980 1.00 19.41 P
ATOM 26 OP1 A B1189 -123.134 48.175 -16.095 1.00 19.41 O
ATOM 27 OP2 A B1189 -121.272 47.476 -14.477 1.00 19.41 O
ATOM 28 O5' A B1189 -121.397 49.857 -15.328 1.00 19.41 O
TER
ATOM 2 P G A1062 -116.721 42.831 -4.551 1.00 14.51 P
ATOM 3 OP1 G A1062 -116.095 43.575 -5.697 1.00 14.51 O
ATOM 4 OP2 G A1062 -116.023 42.827 -3.208 1.00 14.51 O
ATOM 5 O5' G A1062 -118.221 43.297 -4.364 1.00 14.51 O
ATOM 6 C5' G A1062 -118.506 44.589 -3.861 1.00 14.51 C
ATOM 7 C4' G A1062 -119.629 45.200 -4.612 1.00 14.51 C
ATOM 8 O4' G A1062 -119.135 45.660 -5.897 1.00 14.51 O
ATOM 9 C3' G A1062 -120.762 44.241 -4.917 1.00 14.51 C
ATOM 10 O3' G A1062 -121.998 44.951 -4.873 1.00 14.51 O
ATOM 11 C2' G A1062 -120.447 43.810 -6.348 1.00 14.51 C
ATOM 12 O2' G A1062 -121.550 43.330 -7.083 1.00 14.51 O
ATOM 13 C1' G A1062 -119.916 45.103 -6.920 1.00 14.51 C
ATOM 14 N9 G A1062 -119.085 44.957 -8.116 1.00 14.40 N
ATOM 15 C8 G A1062 -117.801 44.504 -8.246 1.00 14.40 C
ATOM 16 N7 G A1062 -117.387 44.547 -9.487 1.00 14.40 N
ATOM 17 C5 G A1062 -118.443 45.066 -10.215 1.00 14.40 C
ATOM 18 C6 G A1062 -118.599 45.364 -11.600 1.00 14.40 C
ATOM 19 O6 G A1062 -117.822 45.229 -12.539 1.00 14.40 O
ATOM 20 N1 G A1062 -119.835 45.885 -11.908 1.00 14.40 N
ATOM 21 C2 G A1062 -120.816 46.093 -10.981 1.00 14.40 C
ATOM 22 N2 G A1062 -121.946 46.618 -11.477 1.00 14.40 N
ATOM 23 N3 G A1062 -120.703 45.827 -9.679 1.00 14.40 N
ATOM 24 C4 G A1062 -119.493 45.325 -9.377 1.00 14.40 C
ATOM 25 P U A1063 -122.983 44.801 -3.611 1.00 46.41 P
ATOM 26 OP1 U A1063 -122.145 44.488 -2.423 1.00 46.41 O
ATOM 27 OP2 U A1063 -124.048 43.856 -4.009 1.00 46.41 O
ATOM 28 O5' U A1063 -123.594 46.255 -3.464 1.00 46.41 O
TER
ATOM 1 O3' U B1187 -129.256 52.100 -13.648 1.00 24.32 O
ATOM 2 P G B1188 -128.397 50.778 -13.881 1.00 32.58 P
ATOM 3 OP1 G B1188 -128.032 50.740 -15.321 1.00 32.58 O
ATOM 4 OP2 G B1188 -129.174 49.656 -13.303 1.00 32.58 O
ATOM 5 O5' G B1188 -127.105 51.044 -12.999 1.00 32.58 O
ATOM 6 C5' G B1188 -125.886 51.461 -13.590 1.00 32.58 C
ATOM 7 C4' G B1188 -124.735 50.621 -13.108 1.00 32.58 C
ATOM 8 O4' G B1188 -125.010 50.171 -11.749 1.00 32.58 O
ATOM 9 C3' G B1188 -124.475 49.345 -13.908 1.00 32.58 C
ATOM 10 O3' G B1188 -123.108 48.982 -13.740 1.00 32.58 O
ATOM 11 C2' G B1188 -125.330 48.344 -13.162 1.00 32.58 C
ATOM 12 O2' G B1188 -125.007 46.998 -13.413 1.00 32.58 O
ATOM 13 C1' G B1188 -125.004 48.754 -11.732 1.00 32.58 C
ATOM 14 N9 G B1188 -125.950 48.295 -10.724 1.00 33.91 N
ATOM 15 C8 G B1188 -127.244 48.702 -10.529 1.00 33.91 C
ATOM 16 N7 G B1188 -127.825 48.120 -9.515 1.00 33.91 N
ATOM 17 C5 G B1188 -126.835 47.298 -9.022 1.00 33.91 C
ATOM 18 C6 G B1188 -126.892 46.429 -7.925 1.00 33.91 C
ATOM 19 O6 G B1188 -127.883 46.253 -7.201 1.00 33.91 O
ATOM 20 N1 G B1188 -125.679 45.763 -7.725 1.00 33.91 N
ATOM 21 C2 G B1188 -124.561 45.925 -8.505 1.00 33.91 C
ATOM 22 N2 G B1188 -123.478 45.199 -8.166 1.00 33.91 N
ATOM 23 N3 G B1188 -124.517 46.743 -9.548 1.00 33.91 N
ATOM 24 C4 G B1188 -125.676 47.391 -9.740 1.00 33.91 C
ATOM 25 P A B1189 -122.209 48.522 -14.980 1.00 19.41 P
ATOM 26 OP1 A B1189 -123.134 48.175 -16.095 1.00 19.41 O
ATOM 27 OP2 A B1189 -121.272 47.476 -14.477 1.00 19.41 O
ATOM 28 O5' A B1189 -121.397 49.857 -15.328 1.00 19.41 O
TER
Atoms:
OP1: (-116.095,43.575,-5.697)
OP2: (-116.023,42.827,-3.208)
C3': (-120.762,44.241,-4.917)
C1': (-119.916,45.103,-6.920)
C5': (-118.506,44.589,-3.861)
O6: (-117.822,45.229,-12.539)
O4': (-119.135,45.660,-5.897)
C8: (-117.801,44.504,-8.246)
C2: (-120.816,46.093,-10.981)
C6: (-118.599,45.364,-11.600)
C5: (-118.443,45.066,-10.215)
C4: (-119.493,45.325,-9.377)
P: (-116.721,42.831,-4.551)
C4': (-119.629,45.200,-4.612)
C2': (-120.447,43.810,-6.348)
O2': (-121.550,43.330,-7.083)
N1: (-119.835,45.885,-11.908)
N2: (-121.946,46.618,-11.477)
N3: (-120.703,45.827,-9.679)
N7: (-117.387,44.547,-9.487)
N9: (-119.085,44.957,-8.116)
O5': (-118.221,43.297,-4.364)
O3': (-121.998,44.951,-4.873)
OP2: (-116.023,42.827,-3.208)
C3': (-120.762,44.241,-4.917)
C1': (-119.916,45.103,-6.920)
C5': (-118.506,44.589,-3.861)
O6: (-117.822,45.229,-12.539)
O4': (-119.135,45.660,-5.897)
C8: (-117.801,44.504,-8.246)
C2: (-120.816,46.093,-10.981)
C6: (-118.599,45.364,-11.600)
C5: (-118.443,45.066,-10.215)
C4: (-119.493,45.325,-9.377)
P: (-116.721,42.831,-4.551)
C4': (-119.629,45.200,-4.612)
C2': (-120.447,43.810,-6.348)
O2': (-121.550,43.330,-7.083)
N1: (-119.835,45.885,-11.908)
N2: (-121.946,46.618,-11.477)
N3: (-120.703,45.827,-9.679)
N7: (-117.387,44.547,-9.487)
N9: (-119.085,44.957,-8.116)
O5': (-118.221,43.297,-4.364)
O3': (-121.998,44.951,-4.873)
OP1: (-128.032,50.740,-15.321)
OP2: (-129.174,49.656,-13.303)
C3': (-124.475,49.345,-13.908)
C1': (-125.004,48.754,-11.732)
C5': (-125.886,51.461,-13.590)
O6: (-127.883,46.253,-7.201)
O4': (-125.010,50.171,-11.749)
C8: (-127.244,48.702,-10.529)
C2: (-124.561,45.925,-8.505)
C6: (-126.892,46.429,-7.925)
C5: (-126.835,47.298,-9.022)
C4: (-125.676,47.391,-9.740)
P: (-128.397,50.778,-13.881)
C4': (-124.735,50.621,-13.108)
C2': (-125.330,48.344,-13.162)
O2': (-125.007,46.998,-13.413)
N1: (-125.679,45.763,-7.725)
N2: (-123.478,45.199,-8.166)
N3: (-124.517,46.743,-9.548)
N7: (-127.825,48.120,-9.515)
N9: (-125.950,48.295,-10.724)
O5': (-127.105,51.044,-12.999)
O3': (-123.108,48.982,-13.740)
OP2: (-129.174,49.656,-13.303)
C3': (-124.475,49.345,-13.908)
C1': (-125.004,48.754,-11.732)
C5': (-125.886,51.461,-13.590)
O6: (-127.883,46.253,-7.201)
O4': (-125.010,50.171,-11.749)
C8: (-127.244,48.702,-10.529)
C2: (-124.561,45.925,-8.505)
C6: (-126.892,46.429,-7.925)
C5: (-126.835,47.298,-9.022)
C4: (-125.676,47.391,-9.740)
P: (-128.397,50.778,-13.881)
C4': (-124.735,50.621,-13.108)
C2': (-125.330,48.344,-13.162)
O2': (-125.007,46.998,-13.413)
N1: (-125.679,45.763,-7.725)
N2: (-123.478,45.199,-8.166)
N3: (-124.517,46.743,-9.548)
N7: (-127.825,48.120,-9.515)
N9: (-125.950,48.295,-10.724)
O5': (-127.105,51.044,-12.999)
O3': (-123.108,48.982,-13.740)
Image (generated by PyMOL):