ClaRNA

Doublet info:

Details

Nucleotide types: GG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3R8N:A943:A1332

Extra

PDB:
ATOM 1 O3' G A 942 -129.735 19.490 10.685 1.00 17.00 O
ATOM 2 P G A 943 -131.156 18.820 11.010 1.00 27.96 P
ATOM 3 OP1 G A 943 -131.160 17.483 10.373 1.00 27.96 O
ATOM 4 OP2 G A 943 -132.208 19.797 10.628 1.00 27.96 O
ATOM 5 O5' G A 943 -131.100 18.660 12.585 1.00 27.96 O
ATOM 6 C5' G A 943 -130.197 17.741 13.182 1.00 27.96 C
ATOM 7 C4' G A 943 -130.778 17.118 14.424 1.00 27.96 C
ATOM 8 O4' G A 943 -130.586 18.010 15.545 1.00 27.96 O
ATOM 9 C3' G A 943 -132.275 16.849 14.387 1.00 27.96 C
ATOM 10 O3' G A 943 -132.583 15.604 13.807 1.00 27.96 O
ATOM 11 C2' G A 943 -132.680 16.945 15.841 1.00 27.96 C
ATOM 12 O2' G A 943 -132.408 15.729 16.518 1.00 27.96 O
ATOM 13 C1' G A 943 -131.729 18.021 16.357 1.00 27.96 C
ATOM 14 N9 G A 943 -132.324 19.362 16.279 1.00 28.59 N
ATOM 15 C8 G A 943 -131.738 20.471 15.728 1.00 28.59 C
ATOM 16 N7 G A 943 -132.509 21.528 15.798 1.00 28.59 N
ATOM 17 C5 G A 943 -133.667 21.094 16.442 1.00 28.59 C
ATOM 18 C6 G A 943 -134.856 21.790 16.797 1.00 28.59 C
ATOM 19 O6 G A 943 -135.166 22.970 16.616 1.00 28.59 O
ATOM 20 N1 G A 943 -135.751 20.937 17.421 1.00 28.59 N
ATOM 21 C2 G A 943 -135.543 19.598 17.676 1.00 28.59 C
ATOM 22 N2 G A 943 -136.530 18.929 18.295 1.00 28.59 N
ATOM 23 N3 G A 943 -134.450 18.944 17.344 1.00 28.59 N
ATOM 24 C4 G A 943 -133.560 19.750 16.738 1.00 28.59 C
ATOM 25 P A A 944 -134.003 15.364 13.115 1.00 28.20 P
ATOM 26 OP1 A A 944 -134.088 13.924 12.802 1.00 28.20 O
ATOM 27 OP2 A A 944 -134.122 16.344 12.003 1.00 28.20 O
ATOM 28 O5' A A 944 -135.034 15.712 14.267 1.00 28.20 O
TER

ATOM 1 O3' A B1331 -139.420 11.790 20.260 1.00 50.24 O
ATOM 2 P G B1332 -138.435 12.746 21.086 1.00 34.85 P
ATOM 3 OP1 G B1332 -137.058 12.230 20.885 1.00 34.85 O
ATOM 4 OP2 G B1332 -138.978 12.845 22.472 1.00 34.85 O
ATOM 5 O5' G B1332 -138.597 14.134 20.345 1.00 34.85 O
ATOM 6 C5' G B1332 -137.586 15.123 20.416 1.00 34.85 C
ATOM 7 C4' G B1332 -138.181 16.485 20.256 1.00 34.85 C
ATOM 8 O4' G B1332 -139.576 16.344 19.881 1.00 34.85 O
ATOM 9 C3' G B1332 -138.202 17.335 21.511 1.00 34.85 C
ATOM 10 O3' G B1332 -137.002 18.058 21.698 1.00 34.85 O
ATOM 11 C2' G B1332 -139.421 18.221 21.309 1.00 34.85 C
ATOM 12 O2' G B1332 -139.118 19.320 20.477 1.00 34.85 O
ATOM 13 C1' G B1332 -140.363 17.286 20.561 1.00 34.85 C
ATOM 14 N9 G B1332 -141.259 16.570 21.484 1.00 35.07 N
ATOM 15 C8 G B1332 -141.229 15.243 21.849 1.00 35.07 C
ATOM 16 N7 G B1332 -142.165 14.941 22.708 1.00 35.07 N
ATOM 17 C5 G B1332 -142.844 16.150 22.928 1.00 35.07 C
ATOM 18 C6 G B1332 -143.958 16.471 23.767 1.00 35.07 C
ATOM 19 O6 G B1332 -144.605 15.710 24.519 1.00 35.07 O
ATOM 20 N1 G B1332 -144.299 17.826 23.669 1.00 35.07 N
ATOM 21 C2 G B1332 -143.669 18.750 22.874 1.00 35.07 C
ATOM 22 N2 G B1332 -144.133 20.002 22.899 1.00 35.07 N
ATOM 23 N3 G B1332 -142.646 18.465 22.099 1.00 35.07 N
ATOM 24 C4 G B1332 -142.289 17.161 22.176 1.00 35.07 C
ATOM 25 P U B1333 -136.001 17.661 22.874 1.00 56.19 P
ATOM 26 OP1 U B1333 -134.701 18.295 22.564 1.00 56.19 O
ATOM 27 OP2 U B1333 -136.065 16.200 23.015 1.00 56.19 O
ATOM 28 O5' U B1333 -136.649 18.354 24.141 1.00 56.19 O
TER

Atoms:
OP1: (-131.160,17.483,10.373)
OP2: (-132.208,19.797,10.628)
C3': (-132.275,16.849,14.387)
C1': (-131.729,18.021,16.357)
C5': (-130.197,17.741,13.182)
O6: (-135.166,22.970,16.616)
O4': (-130.586,18.010,15.545)
C8: (-131.738,20.471,15.728)
C2: (-135.543,19.598,17.676)
C6: (-134.856,21.790,16.797)
C5: (-133.667,21.094,16.442)
C4: (-133.560,19.750,16.738)
P: (-131.156,18.820,11.010)
C4': (-130.778,17.118,14.424)
C2': (-132.680,16.945,15.841)
O2': (-132.408,15.729,16.518)
N1: (-135.751,20.937,17.421)
N2: (-136.530,18.929,18.295)
N3: (-134.450,18.944,17.344)
N7: (-132.509,21.528,15.798)
N9: (-132.324,19.362,16.279)
O5': (-131.100,18.660,12.585)
O3': (-132.583,15.604,13.807)
OP1: (-137.058,12.230,20.885)
OP2: (-138.978,12.845,22.472)
C3': (-138.202,17.335,21.511)
C1': (-140.363,17.286,20.561)
C5': (-137.586,15.123,20.416)
O6: (-144.605,15.710,24.519)
O4': (-139.576,16.344,19.881)
C8: (-141.229,15.243,21.849)
C2: (-143.669,18.750,22.874)
C6: (-143.958,16.471,23.767)
C5: (-142.844,16.150,22.928)
C4: (-142.289,17.161,22.176)
P: (-138.435,12.746,21.086)
C4': (-138.181,16.485,20.256)
C2': (-139.421,18.221,21.309)
O2': (-139.118,19.320,20.477)
N1: (-144.299,17.826,23.669)
N2: (-144.133,20.002,22.899)
N3: (-142.646,18.465,22.099)
N7: (-142.165,14.941,22.708)
N9: (-141.259,16.570,21.484)
O5': (-138.597,14.134,20.345)
O3': (-137.002,18.058,21.698)
Image (generated by PyMOL):
PyMOL image
show in jmol