Doublet info:
Details
Nucleotide types:
GG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8N:V56:V17
Extra
PDB:
ATOM 1 O3' C A 55 -133.067 -0.436 48.358 1.00154.47 O
ATOM 2 P G A 56 -131.884 -1.508 48.527 1.00122.33 P
ATOM 3 OP1 G A 56 -132.494 -2.758 49.050 1.00122.33 O
ATOM 4 OP2 G A 56 -130.817 -0.850 49.320 1.00122.33 O
ATOM 5 O5' G A 56 -131.390 -1.730 47.028 1.00122.33 O
ATOM 6 C5' G A 56 -132.045 -1.100 45.934 1.00122.33 C
ATOM 7 C4' G A 56 -131.064 -0.360 45.059 1.00122.33 C
ATOM 8 O4' G A 56 -130.946 1.019 45.497 1.00122.33 O
ATOM 9 C3' G A 56 -129.631 -0.866 45.093 1.00122.33 C
ATOM 10 O3' G A 56 -129.426 -2.023 44.306 1.00122.33 O
ATOM 11 C2' G A 56 -128.836 0.346 44.623 1.00122.33 C
ATOM 12 O2' G A 56 -128.879 0.473 43.208 1.00122.33 O
ATOM 13 C1' G A 56 -129.636 1.489 45.240 1.00122.33 C
ATOM 14 N9 G A 56 -129.036 1.963 46.497 1.00121.09 N
ATOM 15 C8 G A 56 -129.554 2.007 47.767 1.00121.09 C
ATOM 16 N7 G A 56 -128.717 2.520 48.629 1.00121.09 N
ATOM 17 C5 G A 56 -127.580 2.827 47.886 1.00121.09 C
ATOM 18 C6 G A 56 -126.335 3.409 48.258 1.00121.09 C
ATOM 19 O6 G A 56 -125.964 3.782 49.376 1.00121.09 O
ATOM 20 N1 G A 56 -125.476 3.542 47.168 1.00121.09 N
ATOM 21 C2 G A 56 -125.775 3.160 45.880 1.00121.09 C
ATOM 22 N2 G A 56 -124.831 3.354 44.948 1.00121.09 N
ATOM 23 N3 G A 56 -126.926 2.619 45.522 1.00121.09 N
ATOM 24 C4 G A 56 -127.771 2.487 46.566 1.00121.09 C
ATOM 25 P A A 57 -128.064 -2.855 44.456 1.00114.77 P
ATOM 26 OP1 A A 57 -128.435 -4.220 44.916 1.00114.77 O
ATOM 27 OP2 A A 57 -127.146 -2.036 45.301 1.00114.77 O
ATOM 28 O5' A A 57 -127.521 -2.913 42.959 1.00114.77 O
TER
ATOM 1 O3' C B 16 -118.086 5.086 47.064 1.00126.55 O
ATOM 2 P G B 17 -118.467 6.601 46.636 1.00147.25 P
ATOM 3 OP1 G B 17 -117.719 6.899 45.384 1.00147.25 O
ATOM 4 OP2 G B 17 -118.226 7.457 47.827 1.00147.25 O
ATOM 5 O5' G B 17 -120.028 6.538 46.329 1.00147.25 O
ATOM 6 C5' G B 17 -120.828 5.494 46.835 1.00147.25 C
ATOM 7 C4' G B 17 -120.305 4.160 46.395 1.00147.25 C
ATOM 8 O4' G B 17 -119.867 3.409 47.556 1.00147.25 O
ATOM 9 C3' G B 17 -121.311 3.263 45.691 1.00147.25 C
ATOM 10 O3' G B 17 -121.386 3.493 44.282 1.00147.25 O
ATOM 11 C2' G B 17 -120.839 1.865 46.056 1.00147.25 C
ATOM 12 O2' G B 17 -119.768 1.458 45.216 1.00147.25 O
ATOM 13 C1' G B 17 -120.295 2.078 47.466 1.00147.25 C
ATOM 14 N9 G B 17 -121.313 1.871 48.507 1.00146.38 N
ATOM 15 C8 G B 17 -121.051 2.148 49.825 1.00146.38 C
ATOM 16 N7 G B 17 -122.064 1.928 50.609 1.00146.38 N
ATOM 17 C5 G B 17 -123.071 1.490 49.758 1.00146.38 C
ATOM 18 C6 G B 17 -124.405 1.103 50.066 1.00146.38 C
ATOM 19 O6 G B 17 -124.970 1.071 51.170 1.00146.38 O
ATOM 20 N1 G B 17 -125.094 0.728 48.918 1.00146.38 N
ATOM 21 C2 G B 17 -124.584 0.720 47.644 1.00146.38 C
ATOM 22 N2 G B 17 -125.451 0.314 46.702 1.00146.38 N
ATOM 23 N3 G B 17 -123.339 1.079 47.340 1.00146.38 N
ATOM 24 C4 G B 17 -122.633 1.456 48.440 1.00146.38 C
ATOM 25 P G B 18 -120.536 4.681 43.571 1.00151.87 P
ATOM 26 OP1 G B 18 -119.090 4.396 43.800 1.00151.87 O
ATOM 27 OP2 G B 18 -121.099 5.975 44.049 1.00151.87 O
ATOM 28 O5' G B 18 -120.883 4.480 42.023 1.00151.87 O
TER
ATOM 2 P G A 56 -131.884 -1.508 48.527 1.00122.33 P
ATOM 3 OP1 G A 56 -132.494 -2.758 49.050 1.00122.33 O
ATOM 4 OP2 G A 56 -130.817 -0.850 49.320 1.00122.33 O
ATOM 5 O5' G A 56 -131.390 -1.730 47.028 1.00122.33 O
ATOM 6 C5' G A 56 -132.045 -1.100 45.934 1.00122.33 C
ATOM 7 C4' G A 56 -131.064 -0.360 45.059 1.00122.33 C
ATOM 8 O4' G A 56 -130.946 1.019 45.497 1.00122.33 O
ATOM 9 C3' G A 56 -129.631 -0.866 45.093 1.00122.33 C
ATOM 10 O3' G A 56 -129.426 -2.023 44.306 1.00122.33 O
ATOM 11 C2' G A 56 -128.836 0.346 44.623 1.00122.33 C
ATOM 12 O2' G A 56 -128.879 0.473 43.208 1.00122.33 O
ATOM 13 C1' G A 56 -129.636 1.489 45.240 1.00122.33 C
ATOM 14 N9 G A 56 -129.036 1.963 46.497 1.00121.09 N
ATOM 15 C8 G A 56 -129.554 2.007 47.767 1.00121.09 C
ATOM 16 N7 G A 56 -128.717 2.520 48.629 1.00121.09 N
ATOM 17 C5 G A 56 -127.580 2.827 47.886 1.00121.09 C
ATOM 18 C6 G A 56 -126.335 3.409 48.258 1.00121.09 C
ATOM 19 O6 G A 56 -125.964 3.782 49.376 1.00121.09 O
ATOM 20 N1 G A 56 -125.476 3.542 47.168 1.00121.09 N
ATOM 21 C2 G A 56 -125.775 3.160 45.880 1.00121.09 C
ATOM 22 N2 G A 56 -124.831 3.354 44.948 1.00121.09 N
ATOM 23 N3 G A 56 -126.926 2.619 45.522 1.00121.09 N
ATOM 24 C4 G A 56 -127.771 2.487 46.566 1.00121.09 C
ATOM 25 P A A 57 -128.064 -2.855 44.456 1.00114.77 P
ATOM 26 OP1 A A 57 -128.435 -4.220 44.916 1.00114.77 O
ATOM 27 OP2 A A 57 -127.146 -2.036 45.301 1.00114.77 O
ATOM 28 O5' A A 57 -127.521 -2.913 42.959 1.00114.77 O
TER
ATOM 1 O3' C B 16 -118.086 5.086 47.064 1.00126.55 O
ATOM 2 P G B 17 -118.467 6.601 46.636 1.00147.25 P
ATOM 3 OP1 G B 17 -117.719 6.899 45.384 1.00147.25 O
ATOM 4 OP2 G B 17 -118.226 7.457 47.827 1.00147.25 O
ATOM 5 O5' G B 17 -120.028 6.538 46.329 1.00147.25 O
ATOM 6 C5' G B 17 -120.828 5.494 46.835 1.00147.25 C
ATOM 7 C4' G B 17 -120.305 4.160 46.395 1.00147.25 C
ATOM 8 O4' G B 17 -119.867 3.409 47.556 1.00147.25 O
ATOM 9 C3' G B 17 -121.311 3.263 45.691 1.00147.25 C
ATOM 10 O3' G B 17 -121.386 3.493 44.282 1.00147.25 O
ATOM 11 C2' G B 17 -120.839 1.865 46.056 1.00147.25 C
ATOM 12 O2' G B 17 -119.768 1.458 45.216 1.00147.25 O
ATOM 13 C1' G B 17 -120.295 2.078 47.466 1.00147.25 C
ATOM 14 N9 G B 17 -121.313 1.871 48.507 1.00146.38 N
ATOM 15 C8 G B 17 -121.051 2.148 49.825 1.00146.38 C
ATOM 16 N7 G B 17 -122.064 1.928 50.609 1.00146.38 N
ATOM 17 C5 G B 17 -123.071 1.490 49.758 1.00146.38 C
ATOM 18 C6 G B 17 -124.405 1.103 50.066 1.00146.38 C
ATOM 19 O6 G B 17 -124.970 1.071 51.170 1.00146.38 O
ATOM 20 N1 G B 17 -125.094 0.728 48.918 1.00146.38 N
ATOM 21 C2 G B 17 -124.584 0.720 47.644 1.00146.38 C
ATOM 22 N2 G B 17 -125.451 0.314 46.702 1.00146.38 N
ATOM 23 N3 G B 17 -123.339 1.079 47.340 1.00146.38 N
ATOM 24 C4 G B 17 -122.633 1.456 48.440 1.00146.38 C
ATOM 25 P G B 18 -120.536 4.681 43.571 1.00151.87 P
ATOM 26 OP1 G B 18 -119.090 4.396 43.800 1.00151.87 O
ATOM 27 OP2 G B 18 -121.099 5.975 44.049 1.00151.87 O
ATOM 28 O5' G B 18 -120.883 4.480 42.023 1.00151.87 O
TER
Atoms:
OP1: (-132.494,-2.758,49.050)
OP2: (-130.817,-0.850,49.320)
C3': (-129.631,-0.866,45.093)
C1': (-129.636,1.489,45.240)
C5': (-132.045,-1.100,45.934)
O6: (-125.964,3.782,49.376)
O4': (-130.946,1.019,45.497)
C8: (-129.554,2.007,47.767)
C2: (-125.775,3.160,45.880)
C6: (-126.335,3.409,48.258)
C5: (-127.580,2.827,47.886)
C4: (-127.771,2.487,46.566)
P: (-131.884,-1.508,48.527)
C4': (-131.064,-0.360,45.059)
C2': (-128.836,0.346,44.623)
O2': (-128.879,0.473,43.208)
N1: (-125.476,3.542,47.168)
N2: (-124.831,3.354,44.948)
N3: (-126.926,2.619,45.522)
N7: (-128.717,2.520,48.629)
N9: (-129.036,1.963,46.497)
O5': (-131.390,-1.730,47.028)
O3': (-129.426,-2.023,44.306)
OP2: (-130.817,-0.850,49.320)
C3': (-129.631,-0.866,45.093)
C1': (-129.636,1.489,45.240)
C5': (-132.045,-1.100,45.934)
O6: (-125.964,3.782,49.376)
O4': (-130.946,1.019,45.497)
C8: (-129.554,2.007,47.767)
C2: (-125.775,3.160,45.880)
C6: (-126.335,3.409,48.258)
C5: (-127.580,2.827,47.886)
C4: (-127.771,2.487,46.566)
P: (-131.884,-1.508,48.527)
C4': (-131.064,-0.360,45.059)
C2': (-128.836,0.346,44.623)
O2': (-128.879,0.473,43.208)
N1: (-125.476,3.542,47.168)
N2: (-124.831,3.354,44.948)
N3: (-126.926,2.619,45.522)
N7: (-128.717,2.520,48.629)
N9: (-129.036,1.963,46.497)
O5': (-131.390,-1.730,47.028)
O3': (-129.426,-2.023,44.306)
OP1: (-117.719,6.899,45.384)
OP2: (-118.226,7.457,47.827)
C3': (-121.311,3.263,45.691)
C1': (-120.295,2.078,47.466)
C5': (-120.828,5.494,46.835)
O6: (-124.970,1.071,51.170)
O4': (-119.867,3.409,47.556)
C8: (-121.051,2.148,49.825)
C2: (-124.584,0.720,47.644)
C6: (-124.405,1.103,50.066)
C5: (-123.071,1.490,49.758)
C4: (-122.633,1.456,48.440)
P: (-118.467,6.601,46.636)
C4': (-120.305,4.160,46.395)
C2': (-120.839,1.865,46.056)
O2': (-119.768,1.458,45.216)
N1: (-125.094,0.728,48.918)
N2: (-125.451,0.314,46.702)
N3: (-123.339,1.079,47.340)
N7: (-122.064,1.928,50.609)
N9: (-121.313,1.871,48.507)
O5': (-120.028,6.538,46.329)
O3': (-121.386,3.493,44.282)
OP2: (-118.226,7.457,47.827)
C3': (-121.311,3.263,45.691)
C1': (-120.295,2.078,47.466)
C5': (-120.828,5.494,46.835)
O6: (-124.970,1.071,51.170)
O4': (-119.867,3.409,47.556)
C8: (-121.051,2.148,49.825)
C2: (-124.584,0.720,47.644)
C6: (-124.405,1.103,50.066)
C5: (-123.071,1.490,49.758)
C4: (-122.633,1.456,48.440)
P: (-118.467,6.601,46.636)
C4': (-120.305,4.160,46.395)
C2': (-120.839,1.865,46.056)
O2': (-119.768,1.458,45.216)
N1: (-125.094,0.728,48.918)
N2: (-125.451,0.314,46.702)
N3: (-123.339,1.079,47.340)
N7: (-122.064,1.928,50.609)
N9: (-121.313,1.871,48.507)
O5': (-120.028,6.538,46.329)
O3': (-121.386,3.493,44.282)
Image (generated by PyMOL):