Doublet info:
Details
Nucleotide types:
GG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8S:A536:A554
Extra
PDB:
ATOM 1 O3' G A 535 -80.867-114.150 -0.567 1.00 0.01 O
ATOM 2 P G A 536 -79.709-115.222 -0.761 1.00 0.01 P
ATOM 3 OP1 G A 536 -80.349-116.476 -1.283 1.00 0.01 O
ATOM 4 OP2 G A 536 -78.959-115.270 0.513 1.00 0.01 O
ATOM 5 O5' G A 536 -78.818-114.565 -1.887 1.00 0.01 O
ATOM 6 C5' G A 536 -78.867-115.067 -3.194 1.00 0.01 C
ATOM 7 C4' G A 536 -77.741-114.547 -4.032 1.00 0.01 C
ATOM 8 O4' G A 536 -77.526-113.149 -3.766 1.00 0.01 O
ATOM 9 C3' G A 536 -76.389-115.152 -3.793 1.00 0.01 C
ATOM 10 O3' G A 536 -76.261-116.438 -4.356 1.00 0.01 O
ATOM 11 C2' G A 536 -75.488-114.116 -4.428 1.00 0.01 C
ATOM 12 O2' G A 536 -75.572-114.190 -5.837 1.00 0.01 O
ATOM 13 C1' G A 536 -76.176-112.833 -3.990 1.00 0.01 C
ATOM 14 N9 G A 536 -75.619-112.289 -2.744 1.00 0.01 N
ATOM 15 C8 G A 536 -76.225-112.434 -1.544 1.00 0.01 C
ATOM 16 N7 G A 536 -75.604-111.848 -0.576 1.00 0.01 N
ATOM 17 C5 G A 536 -74.523-111.282 -1.189 1.00 0.01 C
ATOM 18 C6 G A 536 -73.495-110.541 -0.617 1.00 0.01 C
ATOM 19 O6 G A 536 -73.361-110.269 0.572 1.00 0.01 O
ATOM 20 N1 G A 536 -72.574-110.105 -1.528 1.00 0.01 N
ATOM 21 C2 G A 536 -72.644-110.382 -2.834 1.00 0.01 C
ATOM 22 N2 G A 536 -71.647-109.897 -3.558 1.00 0.01 N
ATOM 23 N3 G A 536 -73.598-111.091 -3.389 1.00 0.01 N
ATOM 24 C4 G A 536 -74.514-111.514 -2.516 1.00 0.01 C
ATOM 25 P A A 537 -75.307-117.512 -3.662 1.00 0.01 P
ATOM 26 OP1 A A 537 -76.000-118.823 -3.708 1.00 0.01 O
ATOM 27 OP2 A A 537 -74.923-116.953 -2.360 1.00 0.01 O
ATOM 28 O5' A A 537 -74.061-117.544 -4.614 1.00 0.01 O
TER
ATOM 1 O3' U B 553 -63.725-106.927 0.252 1.00 0.01 O
ATOM 2 P G B 554 -64.845-105.979 -0.341 1.00 0.01 P
ATOM 3 OP1 G B 554 -64.167-104.946 -1.134 1.00 0.01 O
ATOM 4 OP2 G B 554 -65.698-105.576 0.759 1.00 0.01 O
ATOM 5 O5' G B 554 -65.632-106.933 -1.291 1.00 0.01 O
ATOM 6 C5' G B 554 -65.221-107.124 -2.627 1.00 0.01 C
ATOM 7 C4' G B 554 -66.312-107.752 -3.444 1.00 0.01 C
ATOM 8 O4' G B 554 -66.705-109.016 -2.828 1.00 0.01 O
ATOM 9 C3' G B 554 -67.580-106.908 -3.569 1.00 0.01 C
ATOM 10 O3' G B 554 -68.058-106.927 -4.889 1.00 0.01 O
ATOM 11 C2' G B 554 -68.577-107.609 -2.690 1.00 0.01 C
ATOM 12 O2' G B 554 -69.890-107.510 -3.140 1.00 0.01 O
ATOM 13 C1' G B 554 -68.104-109.060 -2.689 1.00 0.01 C
ATOM 14 N9 G B 554 -68.431-109.695 -1.434 1.00 0.01 N
ATOM 15 C8 G B 554 -68.026-109.008 -0.333 1.00 0.01 C
ATOM 16 N7 G B 554 -68.452-109.511 0.755 1.00 0.01 N
ATOM 17 C5 G B 554 -69.226-110.578 0.333 1.00 0.01 C
ATOM 18 C6 G B 554 -69.926-111.464 1.138 1.00 0.01 C
ATOM 19 O6 G B 554 -69.989-111.470 2.358 1.00 0.01 O
ATOM 20 N1 G B 554 -70.587-112.410 0.422 1.00 0.01 N
ATOM 21 C2 G B 554 -70.593-112.487 -0.919 1.00 0.01 C
ATOM 22 N2 G B 554 -71.344-113.527 -1.338 1.00 0.01 N
ATOM 23 N3 G B 554 -69.949-111.637 -1.719 1.00 0.01 N
ATOM 24 C4 G B 554 -69.277-110.702 -1.022 1.00 0.01 C
ATOM 25 P A B 555 -68.950-105.734 -5.426 1.00 0.01 P
ATOM 26 OP1 A B 555 -68.233-104.495 -5.176 1.00 0.01 O
ATOM 27 OP2 A B 555 -70.274-105.897 -4.855 1.00 0.01 O
ATOM 28 O5' A B 555 -68.989-106.016 -6.980 1.00 0.01 O
TER
ATOM 2 P G A 536 -79.709-115.222 -0.761 1.00 0.01 P
ATOM 3 OP1 G A 536 -80.349-116.476 -1.283 1.00 0.01 O
ATOM 4 OP2 G A 536 -78.959-115.270 0.513 1.00 0.01 O
ATOM 5 O5' G A 536 -78.818-114.565 -1.887 1.00 0.01 O
ATOM 6 C5' G A 536 -78.867-115.067 -3.194 1.00 0.01 C
ATOM 7 C4' G A 536 -77.741-114.547 -4.032 1.00 0.01 C
ATOM 8 O4' G A 536 -77.526-113.149 -3.766 1.00 0.01 O
ATOM 9 C3' G A 536 -76.389-115.152 -3.793 1.00 0.01 C
ATOM 10 O3' G A 536 -76.261-116.438 -4.356 1.00 0.01 O
ATOM 11 C2' G A 536 -75.488-114.116 -4.428 1.00 0.01 C
ATOM 12 O2' G A 536 -75.572-114.190 -5.837 1.00 0.01 O
ATOM 13 C1' G A 536 -76.176-112.833 -3.990 1.00 0.01 C
ATOM 14 N9 G A 536 -75.619-112.289 -2.744 1.00 0.01 N
ATOM 15 C8 G A 536 -76.225-112.434 -1.544 1.00 0.01 C
ATOM 16 N7 G A 536 -75.604-111.848 -0.576 1.00 0.01 N
ATOM 17 C5 G A 536 -74.523-111.282 -1.189 1.00 0.01 C
ATOM 18 C6 G A 536 -73.495-110.541 -0.617 1.00 0.01 C
ATOM 19 O6 G A 536 -73.361-110.269 0.572 1.00 0.01 O
ATOM 20 N1 G A 536 -72.574-110.105 -1.528 1.00 0.01 N
ATOM 21 C2 G A 536 -72.644-110.382 -2.834 1.00 0.01 C
ATOM 22 N2 G A 536 -71.647-109.897 -3.558 1.00 0.01 N
ATOM 23 N3 G A 536 -73.598-111.091 -3.389 1.00 0.01 N
ATOM 24 C4 G A 536 -74.514-111.514 -2.516 1.00 0.01 C
ATOM 25 P A A 537 -75.307-117.512 -3.662 1.00 0.01 P
ATOM 26 OP1 A A 537 -76.000-118.823 -3.708 1.00 0.01 O
ATOM 27 OP2 A A 537 -74.923-116.953 -2.360 1.00 0.01 O
ATOM 28 O5' A A 537 -74.061-117.544 -4.614 1.00 0.01 O
TER
ATOM 1 O3' U B 553 -63.725-106.927 0.252 1.00 0.01 O
ATOM 2 P G B 554 -64.845-105.979 -0.341 1.00 0.01 P
ATOM 3 OP1 G B 554 -64.167-104.946 -1.134 1.00 0.01 O
ATOM 4 OP2 G B 554 -65.698-105.576 0.759 1.00 0.01 O
ATOM 5 O5' G B 554 -65.632-106.933 -1.291 1.00 0.01 O
ATOM 6 C5' G B 554 -65.221-107.124 -2.627 1.00 0.01 C
ATOM 7 C4' G B 554 -66.312-107.752 -3.444 1.00 0.01 C
ATOM 8 O4' G B 554 -66.705-109.016 -2.828 1.00 0.01 O
ATOM 9 C3' G B 554 -67.580-106.908 -3.569 1.00 0.01 C
ATOM 10 O3' G B 554 -68.058-106.927 -4.889 1.00 0.01 O
ATOM 11 C2' G B 554 -68.577-107.609 -2.690 1.00 0.01 C
ATOM 12 O2' G B 554 -69.890-107.510 -3.140 1.00 0.01 O
ATOM 13 C1' G B 554 -68.104-109.060 -2.689 1.00 0.01 C
ATOM 14 N9 G B 554 -68.431-109.695 -1.434 1.00 0.01 N
ATOM 15 C8 G B 554 -68.026-109.008 -0.333 1.00 0.01 C
ATOM 16 N7 G B 554 -68.452-109.511 0.755 1.00 0.01 N
ATOM 17 C5 G B 554 -69.226-110.578 0.333 1.00 0.01 C
ATOM 18 C6 G B 554 -69.926-111.464 1.138 1.00 0.01 C
ATOM 19 O6 G B 554 -69.989-111.470 2.358 1.00 0.01 O
ATOM 20 N1 G B 554 -70.587-112.410 0.422 1.00 0.01 N
ATOM 21 C2 G B 554 -70.593-112.487 -0.919 1.00 0.01 C
ATOM 22 N2 G B 554 -71.344-113.527 -1.338 1.00 0.01 N
ATOM 23 N3 G B 554 -69.949-111.637 -1.719 1.00 0.01 N
ATOM 24 C4 G B 554 -69.277-110.702 -1.022 1.00 0.01 C
ATOM 25 P A B 555 -68.950-105.734 -5.426 1.00 0.01 P
ATOM 26 OP1 A B 555 -68.233-104.495 -5.176 1.00 0.01 O
ATOM 27 OP2 A B 555 -70.274-105.897 -4.855 1.00 0.01 O
ATOM 28 O5' A B 555 -68.989-106.016 -6.980 1.00 0.01 O
TER
Atoms:
OP1: (-80.349,-116.476,-1.283)
OP2: (-78.959,-115.270,0.513)
C3': (-76.389,-115.152,-3.793)
C1': (-76.176,-112.833,-3.990)
C5': (-78.867,-115.067,-3.194)
O6: (-73.361,-110.269,0.572)
O4': (-77.526,-113.149,-3.766)
C8: (-76.225,-112.434,-1.544)
C2: (-72.644,-110.382,-2.834)
C6: (-73.495,-110.541,-0.617)
C5: (-74.523,-111.282,-1.189)
C4: (-74.514,-111.514,-2.516)
P: (-79.709,-115.222,-0.761)
C4': (-77.741,-114.547,-4.032)
C2': (-75.488,-114.116,-4.428)
O2': (-75.572,-114.190,-5.837)
N1: (-72.574,-110.105,-1.528)
N2: (-71.647,-109.897,-3.558)
N3: (-73.598,-111.091,-3.389)
N7: (-75.604,-111.848,-0.576)
N9: (-75.619,-112.289,-2.744)
O5': (-78.818,-114.565,-1.887)
O3': (-76.261,-116.438,-4.356)
OP2: (-78.959,-115.270,0.513)
C3': (-76.389,-115.152,-3.793)
C1': (-76.176,-112.833,-3.990)
C5': (-78.867,-115.067,-3.194)
O6: (-73.361,-110.269,0.572)
O4': (-77.526,-113.149,-3.766)
C8: (-76.225,-112.434,-1.544)
C2: (-72.644,-110.382,-2.834)
C6: (-73.495,-110.541,-0.617)
C5: (-74.523,-111.282,-1.189)
C4: (-74.514,-111.514,-2.516)
P: (-79.709,-115.222,-0.761)
C4': (-77.741,-114.547,-4.032)
C2': (-75.488,-114.116,-4.428)
O2': (-75.572,-114.190,-5.837)
N1: (-72.574,-110.105,-1.528)
N2: (-71.647,-109.897,-3.558)
N3: (-73.598,-111.091,-3.389)
N7: (-75.604,-111.848,-0.576)
N9: (-75.619,-112.289,-2.744)
O5': (-78.818,-114.565,-1.887)
O3': (-76.261,-116.438,-4.356)
OP1: (-64.167,-104.946,-1.134)
OP2: (-65.698,-105.576,0.759)
C3': (-67.580,-106.908,-3.569)
C1': (-68.104,-109.060,-2.689)
C5': (-65.221,-107.124,-2.627)
O6: (-69.989,-111.470,2.358)
O4': (-66.705,-109.016,-2.828)
C8: (-68.026,-109.008,-0.333)
C2: (-70.593,-112.487,-0.919)
C6: (-69.926,-111.464,1.138)
C5: (-69.226,-110.578,0.333)
C4: (-69.277,-110.702,-1.022)
P: (-64.845,-105.979,-0.341)
C4': (-66.312,-107.752,-3.444)
C2': (-68.577,-107.609,-2.690)
O2': (-69.890,-107.510,-3.140)
N1: (-70.587,-112.410,0.422)
N2: (-71.344,-113.527,-1.338)
N3: (-69.949,-111.637,-1.719)
N7: (-68.452,-109.511,0.755)
N9: (-68.431,-109.695,-1.434)
O5': (-65.632,-106.933,-1.291)
O3': (-68.058,-106.927,-4.889)
OP2: (-65.698,-105.576,0.759)
C3': (-67.580,-106.908,-3.569)
C1': (-68.104,-109.060,-2.689)
C5': (-65.221,-107.124,-2.627)
O6: (-69.989,-111.470,2.358)
O4': (-66.705,-109.016,-2.828)
C8: (-68.026,-109.008,-0.333)
C2: (-70.593,-112.487,-0.919)
C6: (-69.926,-111.464,1.138)
C5: (-69.226,-110.578,0.333)
C4: (-69.277,-110.702,-1.022)
P: (-64.845,-105.979,-0.341)
C4': (-66.312,-107.752,-3.444)
C2': (-68.577,-107.609,-2.690)
O2': (-69.890,-107.510,-3.140)
N1: (-70.587,-112.410,0.422)
N2: (-71.344,-113.527,-1.338)
N3: (-69.949,-111.637,-1.719)
N7: (-68.452,-109.511,0.755)
N9: (-68.431,-109.695,-1.434)
O5': (-65.632,-106.933,-1.291)
O3': (-68.058,-106.927,-4.889)
Image (generated by PyMOL):