Doublet info:
Details
Nucleotide types:
GG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8T:A1785:A1821
Extra
PDB:
ATOM 1 O3' A A1784 -8.386 126.604 121.740 1.00 0.03 O
ATOM 2 P G A1785 -8.871 127.710 120.656 1.00 1.68 P
ATOM 3 OP1 G A1785 -7.785 127.845 119.683 1.00 1.68 O
ATOM 4 OP2 G A1785 -9.302 128.916 121.385 1.00 1.68 O
ATOM 5 O5' G A1785 -10.130 127.015 119.981 1.00 1.68 O
ATOM 6 C5' G A1785 -9.970 125.841 119.206 1.00 1.68 C
ATOM 7 C4' G A1785 -11.287 125.325 118.694 1.00 1.68 C
ATOM 8 O4' G A1785 -12.093 124.884 119.806 1.00 1.68 O
ATOM 9 C3' G A1785 -12.163 126.335 117.987 1.00 1.68 C
ATOM 10 O3' G A1785 -11.818 126.528 116.650 1.00 1.68 O
ATOM 11 C2' G A1785 -13.546 125.764 118.164 1.00 1.68 C
ATOM 12 O2' G A1785 -13.782 124.699 117.256 1.00 1.68 O
ATOM 13 C1' G A1785 -13.443 125.216 119.581 1.00 1.68 C
ATOM 14 N9 G A1785 -13.850 126.241 120.567 1.00 1.65 N
ATOM 15 C8 G A1785 -13.141 127.263 121.157 1.00 1.65 C
ATOM 16 N7 G A1785 -13.877 128.013 121.943 1.00 1.65 N
ATOM 17 C5 G A1785 -15.139 127.461 121.838 1.00 1.65 C
ATOM 18 C6 G A1785 -16.348 127.820 122.442 1.00 1.65 C
ATOM 19 O6 G A1785 -16.572 128.740 123.232 1.00 1.65 O
ATOM 20 N1 G A1785 -17.357 126.961 122.050 1.00 1.65 N
ATOM 21 C2 G A1785 -17.231 125.879 121.186 1.00 1.65 C
ATOM 22 N2 G A1785 -18.307 125.106 120.909 1.00 1.65 N
ATOM 23 N3 G A1785 -16.101 125.551 120.616 1.00 1.65 N
ATOM 24 C4 G A1785 -15.127 126.385 120.997 1.00 1.65 C
ATOM 25 P C A1786 -12.157 127.923 115.962 1.00 7.74 P
ATOM 26 OP1 C A1786 -11.586 127.883 114.598 1.00 7.74 O
ATOM 27 OP2 C A1786 -11.713 128.993 116.891 1.00 7.74 O
ATOM 28 O5' C A1786 -13.750 127.907 115.894 1.00 7.74 O
TER
ATOM 1 O3' U B1820 -24.056 125.717 123.673 1.00 0.01 O
ATOM 2 P G B1821 -23.844 124.940 125.037 1.00 0.01 P
ATOM 3 OP1 G B1821 -24.986 124.013 125.181 1.00 0.01 O
ATOM 4 OP2 G B1821 -23.625 125.975 126.076 1.00 0.01 O
ATOM 5 O5' G B1821 -22.495 124.139 124.767 1.00 0.01 O
ATOM 6 C5' G B1821 -22.107 123.822 123.444 1.00 0.01 C
ATOM 7 C4' G B1821 -20.622 123.877 123.266 1.00 0.01 C
ATOM 8 O4' G B1821 -20.153 125.195 123.629 1.00 0.01 O
ATOM 9 C3' G B1821 -19.842 122.891 124.116 1.00 0.01 C
ATOM 10 O3' G B1821 -18.675 122.454 123.398 1.00 0.01 O
ATOM 11 C2' G B1821 -19.443 123.735 125.323 1.00 0.01 C
ATOM 12 O2' G B1821 -18.309 123.262 126.015 1.00 0.01 O
ATOM 13 C1' G B1821 -19.197 125.094 124.666 1.00 0.01 C
ATOM 14 N9 G B1821 -19.346 126.271 125.556 1.00 0.23 N
ATOM 15 C8 G B1821 -20.498 126.887 125.988 1.00 0.23 C
ATOM 16 N7 G B1821 -20.302 127.936 126.735 1.00 0.23 N
ATOM 17 C5 G B1821 -18.926 128.064 126.807 1.00 0.23 C
ATOM 18 C6 G B1821 -18.096 129.026 127.478 1.00 0.23 C
ATOM 19 O6 G B1821 -18.351 130.032 128.207 1.00 0.23 O
ATOM 20 N1 G B1821 -16.761 128.722 127.250 1.00 0.23 N
ATOM 21 C2 G B1821 -16.263 127.697 126.510 1.00 0.23 C
ATOM 22 N2 G B1821 -14.924 127.648 126.468 1.00 0.23 N
ATOM 23 N3 G B1821 -17.013 126.814 125.889 1.00 0.23 N
ATOM 24 C4 G B1821 -18.329 127.052 126.072 1.00 0.23 C
ATOM 25 P A B1822 -18.482 120.887 123.032 1.00 8.91 P
ATOM 26 OP1 A B1822 -19.747 120.417 122.398 1.00 8.91 O
ATOM 27 OP2 A B1822 -18.001 120.218 124.264 1.00 8.91 O
ATOM 28 O5' A B1822 -17.319 120.913 121.955 1.00 8.91 O
TER
ATOM 2 P G A1785 -8.871 127.710 120.656 1.00 1.68 P
ATOM 3 OP1 G A1785 -7.785 127.845 119.683 1.00 1.68 O
ATOM 4 OP2 G A1785 -9.302 128.916 121.385 1.00 1.68 O
ATOM 5 O5' G A1785 -10.130 127.015 119.981 1.00 1.68 O
ATOM 6 C5' G A1785 -9.970 125.841 119.206 1.00 1.68 C
ATOM 7 C4' G A1785 -11.287 125.325 118.694 1.00 1.68 C
ATOM 8 O4' G A1785 -12.093 124.884 119.806 1.00 1.68 O
ATOM 9 C3' G A1785 -12.163 126.335 117.987 1.00 1.68 C
ATOM 10 O3' G A1785 -11.818 126.528 116.650 1.00 1.68 O
ATOM 11 C2' G A1785 -13.546 125.764 118.164 1.00 1.68 C
ATOM 12 O2' G A1785 -13.782 124.699 117.256 1.00 1.68 O
ATOM 13 C1' G A1785 -13.443 125.216 119.581 1.00 1.68 C
ATOM 14 N9 G A1785 -13.850 126.241 120.567 1.00 1.65 N
ATOM 15 C8 G A1785 -13.141 127.263 121.157 1.00 1.65 C
ATOM 16 N7 G A1785 -13.877 128.013 121.943 1.00 1.65 N
ATOM 17 C5 G A1785 -15.139 127.461 121.838 1.00 1.65 C
ATOM 18 C6 G A1785 -16.348 127.820 122.442 1.00 1.65 C
ATOM 19 O6 G A1785 -16.572 128.740 123.232 1.00 1.65 O
ATOM 20 N1 G A1785 -17.357 126.961 122.050 1.00 1.65 N
ATOM 21 C2 G A1785 -17.231 125.879 121.186 1.00 1.65 C
ATOM 22 N2 G A1785 -18.307 125.106 120.909 1.00 1.65 N
ATOM 23 N3 G A1785 -16.101 125.551 120.616 1.00 1.65 N
ATOM 24 C4 G A1785 -15.127 126.385 120.997 1.00 1.65 C
ATOM 25 P C A1786 -12.157 127.923 115.962 1.00 7.74 P
ATOM 26 OP1 C A1786 -11.586 127.883 114.598 1.00 7.74 O
ATOM 27 OP2 C A1786 -11.713 128.993 116.891 1.00 7.74 O
ATOM 28 O5' C A1786 -13.750 127.907 115.894 1.00 7.74 O
TER
ATOM 1 O3' U B1820 -24.056 125.717 123.673 1.00 0.01 O
ATOM 2 P G B1821 -23.844 124.940 125.037 1.00 0.01 P
ATOM 3 OP1 G B1821 -24.986 124.013 125.181 1.00 0.01 O
ATOM 4 OP2 G B1821 -23.625 125.975 126.076 1.00 0.01 O
ATOM 5 O5' G B1821 -22.495 124.139 124.767 1.00 0.01 O
ATOM 6 C5' G B1821 -22.107 123.822 123.444 1.00 0.01 C
ATOM 7 C4' G B1821 -20.622 123.877 123.266 1.00 0.01 C
ATOM 8 O4' G B1821 -20.153 125.195 123.629 1.00 0.01 O
ATOM 9 C3' G B1821 -19.842 122.891 124.116 1.00 0.01 C
ATOM 10 O3' G B1821 -18.675 122.454 123.398 1.00 0.01 O
ATOM 11 C2' G B1821 -19.443 123.735 125.323 1.00 0.01 C
ATOM 12 O2' G B1821 -18.309 123.262 126.015 1.00 0.01 O
ATOM 13 C1' G B1821 -19.197 125.094 124.666 1.00 0.01 C
ATOM 14 N9 G B1821 -19.346 126.271 125.556 1.00 0.23 N
ATOM 15 C8 G B1821 -20.498 126.887 125.988 1.00 0.23 C
ATOM 16 N7 G B1821 -20.302 127.936 126.735 1.00 0.23 N
ATOM 17 C5 G B1821 -18.926 128.064 126.807 1.00 0.23 C
ATOM 18 C6 G B1821 -18.096 129.026 127.478 1.00 0.23 C
ATOM 19 O6 G B1821 -18.351 130.032 128.207 1.00 0.23 O
ATOM 20 N1 G B1821 -16.761 128.722 127.250 1.00 0.23 N
ATOM 21 C2 G B1821 -16.263 127.697 126.510 1.00 0.23 C
ATOM 22 N2 G B1821 -14.924 127.648 126.468 1.00 0.23 N
ATOM 23 N3 G B1821 -17.013 126.814 125.889 1.00 0.23 N
ATOM 24 C4 G B1821 -18.329 127.052 126.072 1.00 0.23 C
ATOM 25 P A B1822 -18.482 120.887 123.032 1.00 8.91 P
ATOM 26 OP1 A B1822 -19.747 120.417 122.398 1.00 8.91 O
ATOM 27 OP2 A B1822 -18.001 120.218 124.264 1.00 8.91 O
ATOM 28 O5' A B1822 -17.319 120.913 121.955 1.00 8.91 O
TER
Atoms:
OP1: (-7.785,127.845,119.683)
OP2: (-9.302,128.916,121.385)
C3': (-12.163,126.335,117.987)
C1': (-13.443,125.216,119.581)
C5': (-9.970,125.841,119.206)
O6: (-16.572,128.740,123.232)
O4': (-12.093,124.884,119.806)
C8: (-13.141,127.263,121.157)
C2: (-17.231,125.879,121.186)
C6: (-16.348,127.820,122.442)
C5: (-15.139,127.461,121.838)
C4: (-15.127,126.385,120.997)
P: (-8.871,127.710,120.656)
C4': (-11.287,125.325,118.694)
C2': (-13.546,125.764,118.164)
O2': (-13.782,124.699,117.256)
N1: (-17.357,126.961,122.050)
N2: (-18.307,125.106,120.909)
N3: (-16.101,125.551,120.616)
N7: (-13.877,128.013,121.943)
N9: (-13.850,126.241,120.567)
O5': (-10.130,127.015,119.981)
O3': (-11.818,126.528,116.650)
OP2: (-9.302,128.916,121.385)
C3': (-12.163,126.335,117.987)
C1': (-13.443,125.216,119.581)
C5': (-9.970,125.841,119.206)
O6: (-16.572,128.740,123.232)
O4': (-12.093,124.884,119.806)
C8: (-13.141,127.263,121.157)
C2: (-17.231,125.879,121.186)
C6: (-16.348,127.820,122.442)
C5: (-15.139,127.461,121.838)
C4: (-15.127,126.385,120.997)
P: (-8.871,127.710,120.656)
C4': (-11.287,125.325,118.694)
C2': (-13.546,125.764,118.164)
O2': (-13.782,124.699,117.256)
N1: (-17.357,126.961,122.050)
N2: (-18.307,125.106,120.909)
N3: (-16.101,125.551,120.616)
N7: (-13.877,128.013,121.943)
N9: (-13.850,126.241,120.567)
O5': (-10.130,127.015,119.981)
O3': (-11.818,126.528,116.650)
OP1: (-24.986,124.013,125.181)
OP2: (-23.625,125.975,126.076)
C3': (-19.842,122.891,124.116)
C1': (-19.197,125.094,124.666)
C5': (-22.107,123.822,123.444)
O6: (-18.351,130.032,128.207)
O4': (-20.153,125.195,123.629)
C8: (-20.498,126.887,125.988)
C2: (-16.263,127.697,126.510)
C6: (-18.096,129.026,127.478)
C5: (-18.926,128.064,126.807)
C4: (-18.329,127.052,126.072)
P: (-23.844,124.940,125.037)
C4': (-20.622,123.877,123.266)
C2': (-19.443,123.735,125.323)
O2': (-18.309,123.262,126.015)
N1: (-16.761,128.722,127.250)
N2: (-14.924,127.648,126.468)
N3: (-17.013,126.814,125.889)
N7: (-20.302,127.936,126.735)
N9: (-19.346,126.271,125.556)
O5': (-22.495,124.139,124.767)
O3': (-18.675,122.454,123.398)
OP2: (-23.625,125.975,126.076)
C3': (-19.842,122.891,124.116)
C1': (-19.197,125.094,124.666)
C5': (-22.107,123.822,123.444)
O6: (-18.351,130.032,128.207)
O4': (-20.153,125.195,123.629)
C8: (-20.498,126.887,125.988)
C2: (-16.263,127.697,126.510)
C6: (-18.096,129.026,127.478)
C5: (-18.926,128.064,126.807)
C4: (-18.329,127.052,126.072)
P: (-23.844,124.940,125.037)
C4': (-20.622,123.877,123.266)
C2': (-19.443,123.735,125.323)
O2': (-18.309,123.262,126.015)
N1: (-16.761,128.722,127.250)
N2: (-14.924,127.648,126.468)
N3: (-17.013,126.814,125.889)
N7: (-20.302,127.936,126.735)
N9: (-19.346,126.271,125.556)
O5': (-22.495,124.139,124.767)
O3': (-18.675,122.454,123.398)
Image (generated by PyMOL):