Doublet info:
Details
Nucleotide types:
GG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8T:A536:A554
Extra
PDB:
ATOM 1 O3' G A 535 -63.579 127.722 216.279 1.00 16.56 O
ATOM 2 P G A 536 -62.950 127.177 217.644 1.00 14.17 P
ATOM 3 OP1 G A 536 -64.040 127.196 218.647 1.00 14.17 O
ATOM 4 OP2 G A 536 -61.703 127.971 217.913 1.00 14.17 O
ATOM 5 O5' G A 536 -62.582 125.676 217.287 1.00 14.17 O
ATOM 6 C5' G A 536 -62.432 124.726 218.307 1.00 14.17 C
ATOM 7 C4' G A 536 -61.468 123.678 217.902 1.00 14.17 C
ATOM 8 O4' G A 536 -61.066 123.914 216.536 1.00 14.17 O
ATOM 9 C3' G A 536 -60.146 123.658 218.638 1.00 14.17 C
ATOM 10 O3' G A 536 -60.228 123.100 219.926 1.00 14.17 O
ATOM 11 C2' G A 536 -59.291 122.854 217.690 1.00 14.17 C
ATOM 12 O2' G A 536 -59.673 121.483 217.733 1.00 14.17 O
ATOM 13 C1' G A 536 -59.737 123.452 216.355 1.00 14.17 C
ATOM 14 N9 G A 536 -58.896 124.599 215.954 1.00 14.45 N
ATOM 15 C8 G A 536 -59.251 125.924 216.019 1.00 14.45 C
ATOM 16 N7 G A 536 -58.303 126.714 215.576 1.00 14.45 N
ATOM 17 C5 G A 536 -57.247 125.874 215.202 1.00 14.45 C
ATOM 18 C6 G A 536 -55.929 126.145 214.669 1.00 14.45 C
ATOM 19 O6 G A 536 -55.372 127.222 214.392 1.00 14.45 O
ATOM 20 N1 G A 536 -55.197 124.977 214.456 1.00 14.45 N
ATOM 21 C2 G A 536 -55.680 123.722 214.727 1.00 14.45 C
ATOM 22 N2 G A 536 -54.857 122.714 214.458 1.00 14.45 N
ATOM 23 N3 G A 536 -56.884 123.452 215.214 1.00 14.45 N
ATOM 24 C4 G A 536 -57.618 124.560 215.433 1.00 14.45 C
ATOM 25 P A A 537 -59.727 123.946 221.182 1.00 7.89 P
ATOM 26 OP1 A A 537 -60.940 124.399 221.890 1.00 7.89 O
ATOM 27 OP2 A A 537 -58.771 124.964 220.673 1.00 7.89 O
ATOM 28 O5' A A 537 -58.959 122.860 222.036 1.00 7.89 O
TER
ATOM 1 O3' U B 553 -45.684 124.774 213.932 1.00 7.62 O
ATOM 2 P G B 554 -46.474 124.723 212.546 1.00 0.74 P
ATOM 3 OP1 G B 554 -45.596 124.016 211.589 1.00 0.74 O
ATOM 4 OP2 G B 554 -46.934 126.099 212.225 1.00 0.74 O
ATOM 5 O5' G B 554 -47.712 123.830 212.894 1.00 0.74 O
ATOM 6 C5' G B 554 -47.542 122.516 213.350 1.00 0.74 C
ATOM 7 C4' G B 554 -48.843 121.979 213.810 1.00 0.74 C
ATOM 8 O4' G B 554 -49.333 122.860 214.846 1.00 0.74 O
ATOM 9 C3' G B 554 -49.926 121.945 212.728 1.00 0.74 C
ATOM 10 O3' G B 554 -50.678 120.747 212.789 1.00 0.74 O
ATOM 11 C2' G B 554 -50.822 123.111 213.073 1.00 0.74 C
ATOM 12 O2' G B 554 -52.174 122.931 212.719 1.00 0.74 O
ATOM 13 C1' G B 554 -50.663 123.209 214.571 1.00 0.74 C
ATOM 14 N9 G B 554 -50.913 124.547 215.044 1.00 0.78 N
ATOM 15 C8 G B 554 -50.154 125.602 214.693 1.00 0.78 C
ATOM 16 N7 G B 554 -50.649 126.712 215.158 1.00 0.78 N
ATOM 17 C5 G B 554 -51.816 126.352 215.780 1.00 0.78 C
ATOM 18 C6 G B 554 -52.727 127.169 216.418 1.00 0.78 C
ATOM 19 O6 G B 554 -52.631 128.376 216.542 1.00 0.78 O
ATOM 20 N1 G B 554 -53.770 126.440 216.940 1.00 0.78 N
ATOM 21 C2 G B 554 -53.891 125.079 216.815 1.00 0.78 C
ATOM 22 N2 G B 554 -54.975 124.524 217.351 1.00 0.78 N
ATOM 23 N3 G B 554 -53.039 124.297 216.199 1.00 0.78 N
ATOM 24 C4 G B 554 -52.018 125.011 215.707 1.00 0.78 C
ATOM 25 P A B 555 -51.230 120.120 211.433 1.00 2.04 P
ATOM 26 OP1 A B 555 -50.078 119.945 210.533 1.00 2.04 O
ATOM 27 OP2 A B 555 -52.348 120.959 210.993 1.00 2.04 O
ATOM 28 O5' A B 555 -51.762 118.709 211.892 1.00 2.04 O
TER
ATOM 2 P G A 536 -62.950 127.177 217.644 1.00 14.17 P
ATOM 3 OP1 G A 536 -64.040 127.196 218.647 1.00 14.17 O
ATOM 4 OP2 G A 536 -61.703 127.971 217.913 1.00 14.17 O
ATOM 5 O5' G A 536 -62.582 125.676 217.287 1.00 14.17 O
ATOM 6 C5' G A 536 -62.432 124.726 218.307 1.00 14.17 C
ATOM 7 C4' G A 536 -61.468 123.678 217.902 1.00 14.17 C
ATOM 8 O4' G A 536 -61.066 123.914 216.536 1.00 14.17 O
ATOM 9 C3' G A 536 -60.146 123.658 218.638 1.00 14.17 C
ATOM 10 O3' G A 536 -60.228 123.100 219.926 1.00 14.17 O
ATOM 11 C2' G A 536 -59.291 122.854 217.690 1.00 14.17 C
ATOM 12 O2' G A 536 -59.673 121.483 217.733 1.00 14.17 O
ATOM 13 C1' G A 536 -59.737 123.452 216.355 1.00 14.17 C
ATOM 14 N9 G A 536 -58.896 124.599 215.954 1.00 14.45 N
ATOM 15 C8 G A 536 -59.251 125.924 216.019 1.00 14.45 C
ATOM 16 N7 G A 536 -58.303 126.714 215.576 1.00 14.45 N
ATOM 17 C5 G A 536 -57.247 125.874 215.202 1.00 14.45 C
ATOM 18 C6 G A 536 -55.929 126.145 214.669 1.00 14.45 C
ATOM 19 O6 G A 536 -55.372 127.222 214.392 1.00 14.45 O
ATOM 20 N1 G A 536 -55.197 124.977 214.456 1.00 14.45 N
ATOM 21 C2 G A 536 -55.680 123.722 214.727 1.00 14.45 C
ATOM 22 N2 G A 536 -54.857 122.714 214.458 1.00 14.45 N
ATOM 23 N3 G A 536 -56.884 123.452 215.214 1.00 14.45 N
ATOM 24 C4 G A 536 -57.618 124.560 215.433 1.00 14.45 C
ATOM 25 P A A 537 -59.727 123.946 221.182 1.00 7.89 P
ATOM 26 OP1 A A 537 -60.940 124.399 221.890 1.00 7.89 O
ATOM 27 OP2 A A 537 -58.771 124.964 220.673 1.00 7.89 O
ATOM 28 O5' A A 537 -58.959 122.860 222.036 1.00 7.89 O
TER
ATOM 1 O3' U B 553 -45.684 124.774 213.932 1.00 7.62 O
ATOM 2 P G B 554 -46.474 124.723 212.546 1.00 0.74 P
ATOM 3 OP1 G B 554 -45.596 124.016 211.589 1.00 0.74 O
ATOM 4 OP2 G B 554 -46.934 126.099 212.225 1.00 0.74 O
ATOM 5 O5' G B 554 -47.712 123.830 212.894 1.00 0.74 O
ATOM 6 C5' G B 554 -47.542 122.516 213.350 1.00 0.74 C
ATOM 7 C4' G B 554 -48.843 121.979 213.810 1.00 0.74 C
ATOM 8 O4' G B 554 -49.333 122.860 214.846 1.00 0.74 O
ATOM 9 C3' G B 554 -49.926 121.945 212.728 1.00 0.74 C
ATOM 10 O3' G B 554 -50.678 120.747 212.789 1.00 0.74 O
ATOM 11 C2' G B 554 -50.822 123.111 213.073 1.00 0.74 C
ATOM 12 O2' G B 554 -52.174 122.931 212.719 1.00 0.74 O
ATOM 13 C1' G B 554 -50.663 123.209 214.571 1.00 0.74 C
ATOM 14 N9 G B 554 -50.913 124.547 215.044 1.00 0.78 N
ATOM 15 C8 G B 554 -50.154 125.602 214.693 1.00 0.78 C
ATOM 16 N7 G B 554 -50.649 126.712 215.158 1.00 0.78 N
ATOM 17 C5 G B 554 -51.816 126.352 215.780 1.00 0.78 C
ATOM 18 C6 G B 554 -52.727 127.169 216.418 1.00 0.78 C
ATOM 19 O6 G B 554 -52.631 128.376 216.542 1.00 0.78 O
ATOM 20 N1 G B 554 -53.770 126.440 216.940 1.00 0.78 N
ATOM 21 C2 G B 554 -53.891 125.079 216.815 1.00 0.78 C
ATOM 22 N2 G B 554 -54.975 124.524 217.351 1.00 0.78 N
ATOM 23 N3 G B 554 -53.039 124.297 216.199 1.00 0.78 N
ATOM 24 C4 G B 554 -52.018 125.011 215.707 1.00 0.78 C
ATOM 25 P A B 555 -51.230 120.120 211.433 1.00 2.04 P
ATOM 26 OP1 A B 555 -50.078 119.945 210.533 1.00 2.04 O
ATOM 27 OP2 A B 555 -52.348 120.959 210.993 1.00 2.04 O
ATOM 28 O5' A B 555 -51.762 118.709 211.892 1.00 2.04 O
TER
Atoms:
OP1: (-64.040,127.196,218.647)
OP2: (-61.703,127.971,217.913)
C3': (-60.146,123.658,218.638)
C1': (-59.737,123.452,216.355)
C5': (-62.432,124.726,218.307)
O6: (-55.372,127.222,214.392)
O4': (-61.066,123.914,216.536)
C8: (-59.251,125.924,216.019)
C2: (-55.680,123.722,214.727)
C6: (-55.929,126.145,214.669)
C5: (-57.247,125.874,215.202)
C4: (-57.618,124.560,215.433)
P: (-62.950,127.177,217.644)
C4': (-61.468,123.678,217.902)
C2': (-59.291,122.854,217.690)
O2': (-59.673,121.483,217.733)
N1: (-55.197,124.977,214.456)
N2: (-54.857,122.714,214.458)
N3: (-56.884,123.452,215.214)
N7: (-58.303,126.714,215.576)
N9: (-58.896,124.599,215.954)
O5': (-62.582,125.676,217.287)
O3': (-60.228,123.100,219.926)
OP2: (-61.703,127.971,217.913)
C3': (-60.146,123.658,218.638)
C1': (-59.737,123.452,216.355)
C5': (-62.432,124.726,218.307)
O6: (-55.372,127.222,214.392)
O4': (-61.066,123.914,216.536)
C8: (-59.251,125.924,216.019)
C2: (-55.680,123.722,214.727)
C6: (-55.929,126.145,214.669)
C5: (-57.247,125.874,215.202)
C4: (-57.618,124.560,215.433)
P: (-62.950,127.177,217.644)
C4': (-61.468,123.678,217.902)
C2': (-59.291,122.854,217.690)
O2': (-59.673,121.483,217.733)
N1: (-55.197,124.977,214.456)
N2: (-54.857,122.714,214.458)
N3: (-56.884,123.452,215.214)
N7: (-58.303,126.714,215.576)
N9: (-58.896,124.599,215.954)
O5': (-62.582,125.676,217.287)
O3': (-60.228,123.100,219.926)
OP1: (-45.596,124.016,211.589)
OP2: (-46.934,126.099,212.225)
C3': (-49.926,121.945,212.728)
C1': (-50.663,123.209,214.571)
C5': (-47.542,122.516,213.350)
O6: (-52.631,128.376,216.542)
O4': (-49.333,122.860,214.846)
C8: (-50.154,125.602,214.693)
C2: (-53.891,125.079,216.815)
C6: (-52.727,127.169,216.418)
C5: (-51.816,126.352,215.780)
C4: (-52.018,125.011,215.707)
P: (-46.474,124.723,212.546)
C4': (-48.843,121.979,213.810)
C2': (-50.822,123.111,213.073)
O2': (-52.174,122.931,212.719)
N1: (-53.770,126.440,216.940)
N2: (-54.975,124.524,217.351)
N3: (-53.039,124.297,216.199)
N7: (-50.649,126.712,215.158)
N9: (-50.913,124.547,215.044)
O5': (-47.712,123.830,212.894)
O3': (-50.678,120.747,212.789)
OP2: (-46.934,126.099,212.225)
C3': (-49.926,121.945,212.728)
C1': (-50.663,123.209,214.571)
C5': (-47.542,122.516,213.350)
O6: (-52.631,128.376,216.542)
O4': (-49.333,122.860,214.846)
C8: (-50.154,125.602,214.693)
C2: (-53.891,125.079,216.815)
C6: (-52.727,127.169,216.418)
C5: (-51.816,126.352,215.780)
C4: (-52.018,125.011,215.707)
P: (-46.474,124.723,212.546)
C4': (-48.843,121.979,213.810)
C2': (-50.822,123.111,213.073)
O2': (-52.174,122.931,212.719)
N1: (-53.770,126.440,216.940)
N2: (-54.975,124.524,217.351)
N3: (-53.039,124.297,216.199)
N7: (-50.649,126.712,215.158)
N9: (-50.913,124.547,215.044)
O5': (-47.712,123.830,212.894)
O3': (-50.678,120.747,212.789)
Image (generated by PyMOL):