Doublet info:
Details
Nucleotide types:
GG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3SD3:A23:A66
Extra
PDB:
ATOM 1 O3' A A 22 0.695 4.286 26.061 1.00 31.52 O
ATOM 2 P G A 23 1.936 3.447 26.636 1.00 35.27 P
ATOM 3 OP1 G A 23 1.377 2.426 27.559 1.00 39.41 O
ATOM 4 OP2 G A 23 2.915 4.425 27.164 1.00 36.58 O
ATOM 5 O5' G A 23 2.525 2.740 25.336 1.00 32.53 O
ATOM 6 C5' G A 23 1.784 1.744 24.647 1.00 33.05 C
ATOM 7 C4' G A 23 2.407 1.411 23.312 1.00 34.77 C
ATOM 8 O4' G A 23 2.550 2.620 22.518 1.00 33.55 O
ATOM 9 C3' G A 23 3.814 0.831 23.355 1.00 33.40 C
ATOM 10 O3' G A 23 3.834 -0.558 23.637 1.00 34.32 O
ATOM 11 C2' G A 23 4.355 1.177 21.975 1.00 30.29 C
ATOM 12 O2' G A 23 3.842 0.283 20.998 1.00 28.87 O
ATOM 13 C1' G A 23 3.731 2.554 21.746 1.00 31.56 C
ATOM 14 N9 G A 23 4.630 3.640 22.175 1.00 31.13 N
ATOM 15 C8 G A 23 4.571 4.327 23.361 1.00 32.63 C
ATOM 16 N7 G A 23 5.501 5.238 23.473 1.00 33.00 N
ATOM 17 C5 G A 23 6.218 5.139 22.291 1.00 30.61 C
ATOM 18 C6 G A 23 7.344 5.875 21.846 1.00 28.68 C
ATOM 19 O6 G A 23 7.948 6.785 22.429 1.00 26.61 O
ATOM 20 N1 G A 23 7.760 5.457 20.586 1.00 28.36 N
ATOM 21 C2 G A 23 7.169 4.464 19.845 1.00 28.95 C
ATOM 22 N2 G A 23 7.725 4.221 18.649 1.00 28.14 N
ATOM 23 N3 G A 23 6.115 3.767 20.249 1.00 29.01 N
ATOM 24 C4 G A 23 5.696 4.157 21.475 1.00 30.33 C
ATOM 25 P C A 24 5.071 -1.206 24.435 1.00 36.67 P
ATOM 26 OP1 C A 24 4.848 -2.671 24.464 1.00 39.74 O
ATOM 27 OP2 C A 24 5.190 -0.479 25.719 1.00 38.30 O
ATOM 28 O5' C A 24 6.320 -0.866 23.504 1.00 23.12 O
TER
ATOM 1 O3' C B 65 10.742 8.424 10.997 1.00 24.51 O
ATOM 2 P G B 66 11.093 7.029 11.711 1.00 31.45 P
ATOM 3 OP1 G B 66 12.497 7.123 12.176 1.00 32.97 O
ATOM 4 OP2 G B 66 10.726 5.946 10.766 1.00 32.53 O
ATOM 5 O5' G B 66 10.107 7.010 12.958 1.00 28.74 O
ATOM 6 C5' G B 66 10.281 7.906 14.051 1.00 28.20 C
ATOM 7 C4' G B 66 9.478 7.468 15.250 1.00 29.42 C
ATOM 8 O4' G B 66 8.083 7.334 14.858 1.00 28.97 O
ATOM 9 C3' G B 66 9.881 6.116 15.835 1.00 30.89 C
ATOM 10 O3' G B 66 9.613 6.107 17.238 1.00 29.65 O
ATOM 11 C2' G B 66 8.925 5.159 15.132 1.00 29.36 C
ATOM 12 O2' G B 66 8.707 3.941 15.812 1.00 28.56 O
ATOM 13 C1' G B 66 7.654 6.001 15.058 1.00 26.99 C
ATOM 14 N9 G B 66 6.763 5.634 13.955 1.00 25.47 N
ATOM 15 C8 G B 66 7.034 5.674 12.606 1.00 24.11 C
ATOM 16 N7 G B 66 6.030 5.274 11.875 1.00 23.15 N
ATOM 17 C5 G B 66 5.043 4.945 12.796 1.00 22.30 C
ATOM 18 C6 G B 66 3.727 4.449 12.609 1.00 22.72 C
ATOM 19 O6 G B 66 3.147 4.186 11.550 1.00 23.53 O
ATOM 20 N1 G B 66 3.069 4.262 13.819 1.00 21.08 N
ATOM 21 C2 G B 66 3.607 4.511 15.055 1.00 24.81 C
ATOM 22 N2 G B 66 2.818 4.258 16.111 1.00 27.14 N
ATOM 23 N3 G B 66 4.832 4.965 15.246 1.00 25.79 N
ATOM 24 C4 G B 66 5.484 5.161 14.082 1.00 24.25 C
ATOM 25 P G B 67 10.770 6.471 18.295 1.00 29.82 P
ATOM 26 OP1 G B 67 10.166 6.380 19.647 1.00 28.11 O
ATOM 27 OP2 G B 67 11.369 7.760 17.867 1.00 31.45 O
ATOM 28 O5' G B 67 11.822 5.298 18.091 1.00 35.11 O
TER
ATOM 2 P G A 23 1.936 3.447 26.636 1.00 35.27 P
ATOM 3 OP1 G A 23 1.377 2.426 27.559 1.00 39.41 O
ATOM 4 OP2 G A 23 2.915 4.425 27.164 1.00 36.58 O
ATOM 5 O5' G A 23 2.525 2.740 25.336 1.00 32.53 O
ATOM 6 C5' G A 23 1.784 1.744 24.647 1.00 33.05 C
ATOM 7 C4' G A 23 2.407 1.411 23.312 1.00 34.77 C
ATOM 8 O4' G A 23 2.550 2.620 22.518 1.00 33.55 O
ATOM 9 C3' G A 23 3.814 0.831 23.355 1.00 33.40 C
ATOM 10 O3' G A 23 3.834 -0.558 23.637 1.00 34.32 O
ATOM 11 C2' G A 23 4.355 1.177 21.975 1.00 30.29 C
ATOM 12 O2' G A 23 3.842 0.283 20.998 1.00 28.87 O
ATOM 13 C1' G A 23 3.731 2.554 21.746 1.00 31.56 C
ATOM 14 N9 G A 23 4.630 3.640 22.175 1.00 31.13 N
ATOM 15 C8 G A 23 4.571 4.327 23.361 1.00 32.63 C
ATOM 16 N7 G A 23 5.501 5.238 23.473 1.00 33.00 N
ATOM 17 C5 G A 23 6.218 5.139 22.291 1.00 30.61 C
ATOM 18 C6 G A 23 7.344 5.875 21.846 1.00 28.68 C
ATOM 19 O6 G A 23 7.948 6.785 22.429 1.00 26.61 O
ATOM 20 N1 G A 23 7.760 5.457 20.586 1.00 28.36 N
ATOM 21 C2 G A 23 7.169 4.464 19.845 1.00 28.95 C
ATOM 22 N2 G A 23 7.725 4.221 18.649 1.00 28.14 N
ATOM 23 N3 G A 23 6.115 3.767 20.249 1.00 29.01 N
ATOM 24 C4 G A 23 5.696 4.157 21.475 1.00 30.33 C
ATOM 25 P C A 24 5.071 -1.206 24.435 1.00 36.67 P
ATOM 26 OP1 C A 24 4.848 -2.671 24.464 1.00 39.74 O
ATOM 27 OP2 C A 24 5.190 -0.479 25.719 1.00 38.30 O
ATOM 28 O5' C A 24 6.320 -0.866 23.504 1.00 23.12 O
TER
ATOM 1 O3' C B 65 10.742 8.424 10.997 1.00 24.51 O
ATOM 2 P G B 66 11.093 7.029 11.711 1.00 31.45 P
ATOM 3 OP1 G B 66 12.497 7.123 12.176 1.00 32.97 O
ATOM 4 OP2 G B 66 10.726 5.946 10.766 1.00 32.53 O
ATOM 5 O5' G B 66 10.107 7.010 12.958 1.00 28.74 O
ATOM 6 C5' G B 66 10.281 7.906 14.051 1.00 28.20 C
ATOM 7 C4' G B 66 9.478 7.468 15.250 1.00 29.42 C
ATOM 8 O4' G B 66 8.083 7.334 14.858 1.00 28.97 O
ATOM 9 C3' G B 66 9.881 6.116 15.835 1.00 30.89 C
ATOM 10 O3' G B 66 9.613 6.107 17.238 1.00 29.65 O
ATOM 11 C2' G B 66 8.925 5.159 15.132 1.00 29.36 C
ATOM 12 O2' G B 66 8.707 3.941 15.812 1.00 28.56 O
ATOM 13 C1' G B 66 7.654 6.001 15.058 1.00 26.99 C
ATOM 14 N9 G B 66 6.763 5.634 13.955 1.00 25.47 N
ATOM 15 C8 G B 66 7.034 5.674 12.606 1.00 24.11 C
ATOM 16 N7 G B 66 6.030 5.274 11.875 1.00 23.15 N
ATOM 17 C5 G B 66 5.043 4.945 12.796 1.00 22.30 C
ATOM 18 C6 G B 66 3.727 4.449 12.609 1.00 22.72 C
ATOM 19 O6 G B 66 3.147 4.186 11.550 1.00 23.53 O
ATOM 20 N1 G B 66 3.069 4.262 13.819 1.00 21.08 N
ATOM 21 C2 G B 66 3.607 4.511 15.055 1.00 24.81 C
ATOM 22 N2 G B 66 2.818 4.258 16.111 1.00 27.14 N
ATOM 23 N3 G B 66 4.832 4.965 15.246 1.00 25.79 N
ATOM 24 C4 G B 66 5.484 5.161 14.082 1.00 24.25 C
ATOM 25 P G B 67 10.770 6.471 18.295 1.00 29.82 P
ATOM 26 OP1 G B 67 10.166 6.380 19.647 1.00 28.11 O
ATOM 27 OP2 G B 67 11.369 7.760 17.867 1.00 31.45 O
ATOM 28 O5' G B 67 11.822 5.298 18.091 1.00 35.11 O
TER
Atoms:
OP1: (1.377,2.426,27.559)
OP2: (2.915,4.425,27.164)
C3': (3.814,0.831,23.355)
C1': (3.731,2.554,21.746)
C5': (1.784,1.744,24.647)
O6: (7.948,6.785,22.429)
O4': (2.550,2.620,22.518)
C8: (4.571,4.327,23.361)
C2: (7.169,4.464,19.845)
C6: (7.344,5.875,21.846)
C5: (6.218,5.139,22.291)
C4: (5.696,4.157,21.475)
P: (1.936,3.447,26.636)
C4': (2.407,1.411,23.312)
C2': (4.355,1.177,21.975)
O2': (3.842,0.283,20.998)
N1: (7.760,5.457,20.586)
N2: (7.725,4.221,18.649)
N3: (6.115,3.767,20.249)
N7: (5.501,5.238,23.473)
N9: (4.630,3.640,22.175)
O5': (2.525,2.740,25.336)
O3': (3.834,-0.558,23.637)
OP2: (2.915,4.425,27.164)
C3': (3.814,0.831,23.355)
C1': (3.731,2.554,21.746)
C5': (1.784,1.744,24.647)
O6: (7.948,6.785,22.429)
O4': (2.550,2.620,22.518)
C8: (4.571,4.327,23.361)
C2: (7.169,4.464,19.845)
C6: (7.344,5.875,21.846)
C5: (6.218,5.139,22.291)
C4: (5.696,4.157,21.475)
P: (1.936,3.447,26.636)
C4': (2.407,1.411,23.312)
C2': (4.355,1.177,21.975)
O2': (3.842,0.283,20.998)
N1: (7.760,5.457,20.586)
N2: (7.725,4.221,18.649)
N3: (6.115,3.767,20.249)
N7: (5.501,5.238,23.473)
N9: (4.630,3.640,22.175)
O5': (2.525,2.740,25.336)
O3': (3.834,-0.558,23.637)
OP1: (12.497,7.123,12.176)
OP2: (10.726,5.946,10.766)
C3': (9.881,6.116,15.835)
C1': (7.654,6.001,15.058)
C5': (10.281,7.906,14.051)
O6: (3.147,4.186,11.550)
O4': (8.083,7.334,14.858)
C8: (7.034,5.674,12.606)
C2: (3.607,4.511,15.055)
C6: (3.727,4.449,12.609)
C5: (5.043,4.945,12.796)
C4: (5.484,5.161,14.082)
P: (11.093,7.029,11.711)
C4': (9.478,7.468,15.250)
C2': (8.925,5.159,15.132)
O2': (8.707,3.941,15.812)
N1: (3.069,4.262,13.819)
N2: (2.818,4.258,16.111)
N3: (4.832,4.965,15.246)
N7: (6.030,5.274,11.875)
N9: (6.763,5.634,13.955)
O5': (10.107,7.010,12.958)
O3': (9.613,6.107,17.238)
OP2: (10.726,5.946,10.766)
C3': (9.881,6.116,15.835)
C1': (7.654,6.001,15.058)
C5': (10.281,7.906,14.051)
O6: (3.147,4.186,11.550)
O4': (8.083,7.334,14.858)
C8: (7.034,5.674,12.606)
C2: (3.607,4.511,15.055)
C6: (3.727,4.449,12.609)
C5: (5.043,4.945,12.796)
C4: (5.484,5.161,14.082)
P: (11.093,7.029,11.711)
C4': (9.478,7.468,15.250)
C2': (8.925,5.159,15.132)
O2': (8.707,3.941,15.812)
N1: (3.069,4.262,13.819)
N2: (2.818,4.258,16.111)
N3: (4.832,4.965,15.246)
N7: (6.030,5.274,11.875)
N9: (6.763,5.634,13.955)
O5': (10.107,7.010,12.958)
O3': (9.613,6.107,17.238)
Image (generated by PyMOL):