Doublet info:
Details
Nucleotide types:
GG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5B:21223:21194
Extra
PDB:
ATOM 1 O3' U A1222 -48.380 -51.703 15.354 1.00115.43 O
ATOM 2 P G A1223 -47.585 -52.858 16.120 1.00 98.21 P
ATOM 3 OP1 G A1223 -47.422 -52.408 17.518 1.00 97.73 O
ATOM 4 OP2 G A1223 -46.377 -53.160 15.329 1.00 98.41 O
ATOM 5 O5' G A1223 -48.588 -54.083 16.071 1.00 98.45 O
ATOM 6 C5' G A1223 -48.448 -55.134 17.006 1.00 98.31 C
ATOM 7 C4' G A1223 -49.764 -55.772 17.369 1.00 98.40 C
ATOM 8 O4' G A1223 -50.499 -54.975 18.331 1.00 98.10 O
ATOM 9 C3' G A1223 -50.773 -55.974 16.265 1.00 98.83 C
ATOM 10 O3' G A1223 -50.402 -56.998 15.360 1.00 99.20 O
ATOM 11 C2' G A1223 -52.019 -56.312 17.076 1.00 98.78 C
ATOM 12 O2' G A1223 -51.993 -57.679 17.462 1.00 98.87 O
ATOM 13 C1' G A1223 -51.824 -55.446 18.342 1.00 98.29 C
ATOM 14 N9 G A1223 -52.789 -54.318 18.435 1.00 98.22 N
ATOM 15 C8 G A1223 -54.191 -54.494 18.326 1.00 98.45 C
ATOM 16 N7 G A1223 -54.936 -53.421 18.475 1.00 98.38 N
ATOM 17 C5 G A1223 -53.943 -52.460 18.718 1.00 98.06 C
ATOM 18 C6 G A1223 -54.115 -51.082 18.956 1.00 97.86 C
ATOM 19 O6 G A1223 -55.156 -50.435 18.999 1.00 97.93 O
ATOM 20 N1 G A1223 -52.905 -50.447 19.159 1.00 97.58 N
ATOM 21 C2 G A1223 -51.666 -51.038 19.143 1.00 97.50 C
ATOM 22 N2 G A1223 -50.639 -50.190 19.384 1.00 97.22 N
ATOM 23 N3 G A1223 -51.482 -52.342 18.914 1.00 97.69 N
ATOM 24 C4 G A1223 -52.641 -52.983 18.718 1.00 97.96 C
ATOM 25 P A A1224 -50.748 -56.879 13.791 1.00 92.86 P
ATOM 26 OP1 A A1224 -50.401 -58.174 13.180 1.00 93.19 O
ATOM 27 OP2 A A1224 -50.098 -55.658 13.282 1.00 92.80 O
ATOM 28 O5' A A1224 -52.324 -56.686 13.782 1.00 93.00 O
TER
ATOM 1 O3' A B1193 -46.205 -45.566 26.372 1.00 78.35 O
ATOM 2 P G B1194 -46.534 -44.432 25.302 1.00 81.45 P
ATOM 3 OP1 G B1194 -45.319 -43.594 25.138 1.00 81.32 O
ATOM 4 OP2 G B1194 -47.805 -43.782 25.736 1.00 81.38 O
ATOM 5 O5' G B1194 -46.788 -45.286 23.991 1.00 81.89 O
ATOM 6 C5' G B1194 -47.583 -44.769 22.948 1.00 82.18 C
ATOM 7 C4' G B1194 -48.410 -45.839 22.309 1.00 82.53 C
ATOM 8 O4' G B1194 -49.088 -46.620 23.331 1.00 82.40 O
ATOM 9 C3' G B1194 -49.546 -45.354 21.442 1.00 82.83 C
ATOM 10 O3' G B1194 -49.136 -44.879 20.179 1.00 83.11 O
ATOM 11 C2' G B1194 -50.439 -46.576 21.389 1.00 83.05 C
ATOM 12 O2' G B1194 -49.884 -47.576 20.549 1.00 83.33 O
ATOM 13 C1' G B1194 -50.337 -47.053 22.833 1.00 82.70 C
ATOM 14 N9 G B1194 -51.420 -46.489 23.663 1.00 82.55 N
ATOM 15 C8 G B1194 -51.435 -45.581 24.705 1.00 82.20 C
ATOM 16 N7 G B1194 -52.654 -45.336 25.155 1.00 82.22 N
ATOM 17 C5 G B1194 -53.476 -46.136 24.348 1.00 82.61 C
ATOM 18 C6 G B1194 -54.877 -46.340 24.330 1.00 82.85 C
ATOM 19 O6 G B1194 -55.738 -45.839 25.045 1.00 82.76 O
ATOM 20 N1 G B1194 -55.278 -47.231 23.344 1.00 83.25 N
ATOM 21 C2 G B1194 -54.458 -47.885 22.458 1.00 83.42 C
ATOM 22 N2 G B1194 -55.063 -48.714 21.578 1.00 83.82 N
ATOM 23 N3 G B1194 -53.151 -47.727 22.465 1.00 83.21 N
ATOM 24 C4 G B1194 -52.736 -46.847 23.422 1.00 82.82 C
ATOM 25 P G B1195 -49.971 -43.704 19.487 1.00 86.23 P
ATOM 26 OP1 G B1195 -49.127 -43.130 18.400 1.00 86.44 O
ATOM 27 OP2 G B1195 -50.449 -42.814 20.586 1.00 85.89 O
ATOM 28 O5' G B1195 -51.204 -44.489 18.853 1.00 86.62 O
TER
ATOM 2 P G A1223 -47.585 -52.858 16.120 1.00 98.21 P
ATOM 3 OP1 G A1223 -47.422 -52.408 17.518 1.00 97.73 O
ATOM 4 OP2 G A1223 -46.377 -53.160 15.329 1.00 98.41 O
ATOM 5 O5' G A1223 -48.588 -54.083 16.071 1.00 98.45 O
ATOM 6 C5' G A1223 -48.448 -55.134 17.006 1.00 98.31 C
ATOM 7 C4' G A1223 -49.764 -55.772 17.369 1.00 98.40 C
ATOM 8 O4' G A1223 -50.499 -54.975 18.331 1.00 98.10 O
ATOM 9 C3' G A1223 -50.773 -55.974 16.265 1.00 98.83 C
ATOM 10 O3' G A1223 -50.402 -56.998 15.360 1.00 99.20 O
ATOM 11 C2' G A1223 -52.019 -56.312 17.076 1.00 98.78 C
ATOM 12 O2' G A1223 -51.993 -57.679 17.462 1.00 98.87 O
ATOM 13 C1' G A1223 -51.824 -55.446 18.342 1.00 98.29 C
ATOM 14 N9 G A1223 -52.789 -54.318 18.435 1.00 98.22 N
ATOM 15 C8 G A1223 -54.191 -54.494 18.326 1.00 98.45 C
ATOM 16 N7 G A1223 -54.936 -53.421 18.475 1.00 98.38 N
ATOM 17 C5 G A1223 -53.943 -52.460 18.718 1.00 98.06 C
ATOM 18 C6 G A1223 -54.115 -51.082 18.956 1.00 97.86 C
ATOM 19 O6 G A1223 -55.156 -50.435 18.999 1.00 97.93 O
ATOM 20 N1 G A1223 -52.905 -50.447 19.159 1.00 97.58 N
ATOM 21 C2 G A1223 -51.666 -51.038 19.143 1.00 97.50 C
ATOM 22 N2 G A1223 -50.639 -50.190 19.384 1.00 97.22 N
ATOM 23 N3 G A1223 -51.482 -52.342 18.914 1.00 97.69 N
ATOM 24 C4 G A1223 -52.641 -52.983 18.718 1.00 97.96 C
ATOM 25 P A A1224 -50.748 -56.879 13.791 1.00 92.86 P
ATOM 26 OP1 A A1224 -50.401 -58.174 13.180 1.00 93.19 O
ATOM 27 OP2 A A1224 -50.098 -55.658 13.282 1.00 92.80 O
ATOM 28 O5' A A1224 -52.324 -56.686 13.782 1.00 93.00 O
TER
ATOM 1 O3' A B1193 -46.205 -45.566 26.372 1.00 78.35 O
ATOM 2 P G B1194 -46.534 -44.432 25.302 1.00 81.45 P
ATOM 3 OP1 G B1194 -45.319 -43.594 25.138 1.00 81.32 O
ATOM 4 OP2 G B1194 -47.805 -43.782 25.736 1.00 81.38 O
ATOM 5 O5' G B1194 -46.788 -45.286 23.991 1.00 81.89 O
ATOM 6 C5' G B1194 -47.583 -44.769 22.948 1.00 82.18 C
ATOM 7 C4' G B1194 -48.410 -45.839 22.309 1.00 82.53 C
ATOM 8 O4' G B1194 -49.088 -46.620 23.331 1.00 82.40 O
ATOM 9 C3' G B1194 -49.546 -45.354 21.442 1.00 82.83 C
ATOM 10 O3' G B1194 -49.136 -44.879 20.179 1.00 83.11 O
ATOM 11 C2' G B1194 -50.439 -46.576 21.389 1.00 83.05 C
ATOM 12 O2' G B1194 -49.884 -47.576 20.549 1.00 83.33 O
ATOM 13 C1' G B1194 -50.337 -47.053 22.833 1.00 82.70 C
ATOM 14 N9 G B1194 -51.420 -46.489 23.663 1.00 82.55 N
ATOM 15 C8 G B1194 -51.435 -45.581 24.705 1.00 82.20 C
ATOM 16 N7 G B1194 -52.654 -45.336 25.155 1.00 82.22 N
ATOM 17 C5 G B1194 -53.476 -46.136 24.348 1.00 82.61 C
ATOM 18 C6 G B1194 -54.877 -46.340 24.330 1.00 82.85 C
ATOM 19 O6 G B1194 -55.738 -45.839 25.045 1.00 82.76 O
ATOM 20 N1 G B1194 -55.278 -47.231 23.344 1.00 83.25 N
ATOM 21 C2 G B1194 -54.458 -47.885 22.458 1.00 83.42 C
ATOM 22 N2 G B1194 -55.063 -48.714 21.578 1.00 83.82 N
ATOM 23 N3 G B1194 -53.151 -47.727 22.465 1.00 83.21 N
ATOM 24 C4 G B1194 -52.736 -46.847 23.422 1.00 82.82 C
ATOM 25 P G B1195 -49.971 -43.704 19.487 1.00 86.23 P
ATOM 26 OP1 G B1195 -49.127 -43.130 18.400 1.00 86.44 O
ATOM 27 OP2 G B1195 -50.449 -42.814 20.586 1.00 85.89 O
ATOM 28 O5' G B1195 -51.204 -44.489 18.853 1.00 86.62 O
TER
Atoms:
OP1: (-47.422,-52.408,17.518)
OP2: (-46.377,-53.160,15.329)
C3': (-50.773,-55.974,16.265)
C1': (-51.824,-55.446,18.342)
C5': (-48.448,-55.134,17.006)
O6: (-55.156,-50.435,18.999)
O4': (-50.499,-54.975,18.331)
C8: (-54.191,-54.494,18.326)
C2: (-51.666,-51.038,19.143)
C6: (-54.115,-51.082,18.956)
C5: (-53.943,-52.460,18.718)
C4: (-52.641,-52.983,18.718)
P: (-47.585,-52.858,16.120)
C4': (-49.764,-55.772,17.369)
C2': (-52.019,-56.312,17.076)
O2': (-51.993,-57.679,17.462)
N1: (-52.905,-50.447,19.159)
N2: (-50.639,-50.190,19.384)
N3: (-51.482,-52.342,18.914)
N7: (-54.936,-53.421,18.475)
N9: (-52.789,-54.318,18.435)
O5': (-48.588,-54.083,16.071)
O3': (-50.402,-56.998,15.360)
OP2: (-46.377,-53.160,15.329)
C3': (-50.773,-55.974,16.265)
C1': (-51.824,-55.446,18.342)
C5': (-48.448,-55.134,17.006)
O6: (-55.156,-50.435,18.999)
O4': (-50.499,-54.975,18.331)
C8: (-54.191,-54.494,18.326)
C2: (-51.666,-51.038,19.143)
C6: (-54.115,-51.082,18.956)
C5: (-53.943,-52.460,18.718)
C4: (-52.641,-52.983,18.718)
P: (-47.585,-52.858,16.120)
C4': (-49.764,-55.772,17.369)
C2': (-52.019,-56.312,17.076)
O2': (-51.993,-57.679,17.462)
N1: (-52.905,-50.447,19.159)
N2: (-50.639,-50.190,19.384)
N3: (-51.482,-52.342,18.914)
N7: (-54.936,-53.421,18.475)
N9: (-52.789,-54.318,18.435)
O5': (-48.588,-54.083,16.071)
O3': (-50.402,-56.998,15.360)
OP1: (-45.319,-43.594,25.138)
OP2: (-47.805,-43.782,25.736)
C3': (-49.546,-45.354,21.442)
C1': (-50.337,-47.053,22.833)
C5': (-47.583,-44.769,22.948)
O6: (-55.738,-45.839,25.045)
O4': (-49.088,-46.620,23.331)
C8: (-51.435,-45.581,24.705)
C2: (-54.458,-47.885,22.458)
C6: (-54.877,-46.340,24.330)
C5: (-53.476,-46.136,24.348)
C4: (-52.736,-46.847,23.422)
P: (-46.534,-44.432,25.302)
C4': (-48.410,-45.839,22.309)
C2': (-50.439,-46.576,21.389)
O2': (-49.884,-47.576,20.549)
N1: (-55.278,-47.231,23.344)
N2: (-55.063,-48.714,21.578)
N3: (-53.151,-47.727,22.465)
N7: (-52.654,-45.336,25.155)
N9: (-51.420,-46.489,23.663)
O5': (-46.788,-45.286,23.991)
O3': (-49.136,-44.879,20.179)
OP2: (-47.805,-43.782,25.736)
C3': (-49.546,-45.354,21.442)
C1': (-50.337,-47.053,22.833)
C5': (-47.583,-44.769,22.948)
O6: (-55.738,-45.839,25.045)
O4': (-49.088,-46.620,23.331)
C8: (-51.435,-45.581,24.705)
C2: (-54.458,-47.885,22.458)
C6: (-54.877,-46.340,24.330)
C5: (-53.476,-46.136,24.348)
C4: (-52.736,-46.847,23.422)
P: (-46.534,-44.432,25.302)
C4': (-48.410,-45.839,22.309)
C2': (-50.439,-46.576,21.389)
O2': (-49.884,-47.576,20.549)
N1: (-55.278,-47.231,23.344)
N2: (-55.063,-48.714,21.578)
N3: (-53.151,-47.727,22.465)
N7: (-52.654,-45.336,25.155)
N9: (-51.420,-46.489,23.663)
O5': (-46.788,-45.286,23.991)
O3': (-49.136,-44.879,20.179)
Image (generated by PyMOL):