ClaRNA

Doublet info:

Details

Nucleotide types: GG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3U5H:51968:51988

Extra

PDB:
ATOM 1 O3' C A1967 190.086 -18.281 193.143 1.00 48.25 O
ATOM 2 P G A1968 191.501 -18.679 192.542 1.00 55.07 P
ATOM 3 OP1 G A1968 191.374 -20.068 191.972 1.00 55.48 O
ATOM 4 OP2 G A1968 192.523 -18.422 193.591 1.00 54.85 O
ATOM 5 O5' G A1968 191.633 -17.629 191.374 1.00 55.35 O
ATOM 6 C5' G A1968 190.725 -17.656 190.289 1.00 55.58 C
ATOM 7 C4' G A1968 191.451 -17.510 188.989 1.00 56.18 C
ATOM 8 O4' G A1968 192.176 -16.250 188.999 1.00 56.12 O
ATOM 9 C3' G A1968 192.491 -18.596 188.716 1.00 56.65 C
ATOM 10 O3' G A1968 192.451 -18.961 187.328 1.00 57.23 O
ATOM 11 C2' G A1968 193.808 -17.902 189.043 1.00 56.68 C
ATOM 12 O2' G A1968 194.915 -18.411 188.345 1.00 57.25 O
ATOM 13 C1' G A1968 193.499 -16.477 188.626 1.00 56.55 C
ATOM 14 N9 G A1968 194.351 -15.469 189.243 1.00 56.34 N
ATOM 15 C8 G A1968 195.189 -15.618 190.315 1.00 56.13 C
ATOM 16 N7 G A1968 195.881 -14.549 190.579 1.00 56.03 N
ATOM 17 C5 G A1968 195.495 -13.664 189.597 1.00 56.19 C
ATOM 18 C6 G A1968 195.929 -12.346 189.368 1.00 56.18 C
ATOM 19 O6 G A1968 196.765 -11.735 190.041 1.00 56.03 O
ATOM 20 N1 G A1968 195.297 -11.777 188.257 1.00 56.40 N
ATOM 21 C2 G A1968 194.382 -12.426 187.467 1.00 56.59 C
ATOM 22 N2 G A1968 193.885 -11.728 186.447 1.00 56.80 N
ATOM 23 N3 G A1968 193.972 -13.671 187.663 1.00 56.60 N
ATOM 24 C4 G A1968 194.560 -14.215 188.750 1.00 56.39 C
ATOM 25 P A A1969 191.401 -20.079 186.836 1.00 52.42 P
ATOM 26 OP1 A A1969 191.182 -21.001 187.985 1.00 52.09 O
ATOM 27 OP2 A A1969 191.907 -20.636 185.561 1.00 53.11 O
ATOM 28 O5' A A1969 190.088 -19.239 186.564 1.00 52.14 O
TER

ATOM 1 O3' U B1987 189.142 -4.362 184.550 1.00 52.33 O
ATOM 2 P G B1988 190.633 -4.554 184.004 1.00 49.41 P
ATOM 3 OP1 G B1988 191.395 -3.351 184.389 1.00 49.29 O
ATOM 4 OP2 G B1988 190.540 -4.894 182.598 1.00 49.99 O
ATOM 5 O5' G B1988 191.144 -5.793 184.823 1.00 49.30 O
ATOM 6 C5' G B1988 190.994 -5.820 186.221 1.00 48.73 C
ATOM 7 C4' G B1988 191.469 -7.110 186.784 1.00 48.73 C
ATOM 8 O4' G B1988 190.534 -8.169 186.426 1.00 48.81 O
ATOM 9 C3' G B1988 192.836 -7.559 186.287 1.00 49.24 C
ATOM 10 O3' G B1988 193.536 -8.180 187.369 1.00 49.03 O
ATOM 11 C2' G B1988 192.469 -8.607 185.240 1.00 49.69 C
ATOM 12 O2' G B1988 193.479 -9.552 184.969 1.00 50.11 O
ATOM 13 C1' G B1988 191.256 -9.248 185.890 1.00 49.28 C
ATOM 14 N9 G B1988 190.398 -10.007 184.966 1.00 49.57 N
ATOM 15 C8 G B1988 189.427 -9.576 184.056 1.00 49.70 C
ATOM 16 N7 G B1988 188.837 -10.539 183.363 1.00 49.99 N
ATOM 17 C5 G B1988 189.456 -11.682 183.859 1.00 50.05 C
ATOM 18 C6 G B1988 189.277 -13.033 183.503 1.00 50.34 C
ATOM 19 O6 G B1988 188.522 -13.483 182.675 1.00 50.60 O
ATOM 20 N1 G B1988 190.065 -13.907 184.213 1.00 50.32 N
ATOM 21 C2 G B1988 190.942 -13.498 185.149 1.00 50.05 C
ATOM 22 N2 G B1988 191.613 -14.494 185.695 1.00 50.10 N
ATOM 23 N3 G B1988 191.177 -12.249 185.505 1.00 49.79 N
ATOM 24 C4 G B1988 190.404 -11.385 184.829 1.00 49.80 C
ATOM 25 P A B1989 195.123 -8.175 187.401 1.00 54.28 P
ATOM 26 OP1 A B1989 195.551 -7.104 186.512 1.00 54.60 O
ATOM 27 OP2 A B1989 195.580 -9.547 187.140 1.00 54.64 O
ATOM 28 O5' A B1989 195.437 -7.794 188.879 1.00 53.75 O
TER

Atoms:
OP1: (191.374,-20.068,191.972)
OP2: (192.523,-18.422,193.591)
C3': (192.491,-18.596,188.716)
C1': (193.499,-16.477,188.626)
C5': (190.725,-17.656,190.289)
O6: (196.765,-11.735,190.041)
O4': (192.176,-16.250,188.999)
C8: (195.189,-15.618,190.315)
C2: (194.382,-12.426,187.467)
C6: (195.929,-12.346,189.368)
C5: (195.495,-13.664,189.597)
C4: (194.560,-14.215,188.750)
P: (191.501,-18.679,192.542)
C4': (191.451,-17.510,188.989)
C2': (193.808,-17.902,189.043)
O2': (194.915,-18.411,188.345)
N1: (195.297,-11.777,188.257)
N2: (193.885,-11.728,186.447)
N3: (193.972,-13.671,187.663)
N7: (195.881,-14.549,190.579)
N9: (194.351,-15.469,189.243)
O5': (191.633,-17.629,191.374)
O3': (192.451,-18.961,187.328)
OP1: (191.395,-3.351,184.389)
OP2: (190.540,-4.894,182.598)
C3': (192.836,-7.559,186.287)
C1': (191.256,-9.248,185.890)
C5': (190.994,-5.820,186.221)
O6: (188.522,-13.483,182.675)
O4': (190.534,-8.169,186.426)
C8: (189.427,-9.576,184.056)
C2: (190.942,-13.498,185.149)
C6: (189.277,-13.033,183.503)
C5: (189.456,-11.682,183.859)
C4: (190.404,-11.385,184.829)
P: (190.633,-4.554,184.004)
C4': (191.469,-7.110,186.784)
C2': (192.469,-8.607,185.240)
O2': (193.479,-9.552,184.969)
N1: (190.065,-13.907,184.213)
N2: (191.613,-14.494,185.695)
N3: (191.177,-12.249,185.505)
N7: (188.837,-10.539,183.363)
N9: (190.398,-10.007,184.966)
O5': (191.144,-5.793,184.823)
O3': (193.536,-8.180,187.369)
Image (generated by PyMOL):
PyMOL image
show in jmol