Doublet info:
Details
Nucleotide types:
AG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VQ4:0348:0280
Extra
PDB:
ATOM 1 O3' U A 347 57.820 117.964 8.538 1.00 90.76 O
ATOM 2 P A A 348 57.864 117.143 7.152 1.00 91.74 P
ATOM 3 OP1 A A 348 58.456 115.811 7.462 1.00 90.46 O
ATOM 4 OP2 A A 348 58.489 117.994 6.108 1.00 91.73 O
ATOM 5 O5' A A 348 56.328 116.937 6.770 1.00 90.56 O
ATOM 6 C5' A A 348 55.514 115.970 7.464 1.00 89.47 C
ATOM 7 C4' A A 348 54.122 115.930 6.875 1.00 88.64 C
ATOM 8 O4' A A 348 53.446 117.190 7.115 1.00 87.75 O
ATOM 9 C3' A A 348 54.054 115.761 5.370 1.00 89.23 C
ATOM 10 O3' A A 348 54.210 114.402 4.999 1.00 91.96 O
ATOM 11 C2' A A 348 52.673 116.313 5.044 1.00 88.11 C
ATOM 12 O2' A A 348 51.633 115.396 5.323 1.00 87.59 O
ATOM 13 C1' A A 348 52.580 117.479 6.029 1.00 87.05 C
ATOM 14 N9 A A 348 52.958 118.777 5.465 1.00 85.84 N
ATOM 15 C8 A A 348 54.136 119.468 5.635 1.00 85.18 C
ATOM 16 N7 A A 348 54.158 120.633 5.034 1.00 84.17 N
ATOM 17 C5 A A 348 52.915 120.715 4.420 1.00 84.90 C
ATOM 18 C6 A A 348 52.308 121.717 3.633 1.00 84.17 C
ATOM 19 N6 A A 348 52.893 122.881 3.331 1.00 83.22 N
ATOM 20 N1 A A 348 51.060 121.479 3.166 1.00 83.52 N
ATOM 21 C2 A A 348 50.470 120.317 3.477 1.00 83.77 C
ATOM 22 N3 A A 348 50.930 119.306 4.214 1.00 84.81 N
ATOM 23 C4 A A 348 52.172 119.571 4.663 1.00 85.35 C
ATOM 24 P C A 349 54.889 114.039 3.592 1.00 93.91 P
ATOM 25 OP1 C A 349 54.894 112.554 3.471 1.00 93.18 O
ATOM 26 OP2 C A 349 56.166 114.789 3.481 1.00 94.23 O
ATOM 27 O5' C A 349 53.869 114.635 2.526 1.00 94.59 O
TER
ATOM 1 O3' C B 279 55.605 129.298 -1.848 1.00 93.29 O
ATOM 2 P G B 280 55.050 130.160 -0.616 1.00 93.07 P
ATOM 3 OP1 G B 280 54.086 131.159 -1.156 1.00 92.47 O
ATOM 4 OP2 G B 280 56.221 130.623 0.176 1.00 92.74 O
ATOM 5 O5' G B 280 54.237 129.100 0.254 1.00 92.74 O
ATOM 6 C5' G B 280 53.032 128.483 -0.252 1.00 90.65 C
ATOM 7 C4' G B 280 52.650 127.295 0.604 1.00 89.27 C
ATOM 8 O4' G B 280 53.716 126.306 0.553 1.00 88.43 O
ATOM 9 C3' G B 280 52.484 127.576 2.089 1.00 88.84 C
ATOM 10 O3' G B 280 51.212 128.138 2.403 1.00 90.21 O
ATOM 11 C2' G B 280 52.716 126.200 2.700 1.00 87.51 C
ATOM 12 O2' G B 280 51.610 125.328 2.573 1.00 86.76 O
ATOM 13 C1' G B 280 53.859 125.687 1.824 1.00 86.10 C
ATOM 14 N9 G B 280 55.166 126.051 2.365 1.00 83.15 N
ATOM 15 C8 G B 280 55.840 127.238 2.184 1.00 81.71 C
ATOM 16 N7 G B 280 56.978 127.284 2.820 1.00 80.89 N
ATOM 17 C5 G B 280 57.068 126.051 3.453 1.00 80.99 C
ATOM 18 C6 G B 280 58.084 125.519 4.296 1.00 80.41 C
ATOM 19 O6 G B 280 59.143 126.049 4.654 1.00 79.39 O
ATOM 20 N1 G B 280 57.769 124.234 4.728 1.00 79.02 N
ATOM 21 C2 G B 280 56.630 123.547 4.392 1.00 79.37 C
ATOM 22 N2 G B 280 56.506 122.322 4.909 1.00 79.02 N
ATOM 23 N3 G B 280 55.679 124.027 3.605 1.00 80.24 N
ATOM 24 C4 G B 280 55.961 125.276 3.177 1.00 81.52 C
ATOM 25 P A B 281 51.020 128.956 3.778 1.00 91.96 P
ATOM 26 OP1 A B 281 49.704 129.654 3.708 1.00 91.09 O
ATOM 27 OP2 A B 281 52.259 129.745 4.033 1.00 91.61 O
ATOM 28 O5' A B 281 50.933 127.811 4.884 1.00 90.50 O
TER
ATOM 2 P A A 348 57.864 117.143 7.152 1.00 91.74 P
ATOM 3 OP1 A A 348 58.456 115.811 7.462 1.00 90.46 O
ATOM 4 OP2 A A 348 58.489 117.994 6.108 1.00 91.73 O
ATOM 5 O5' A A 348 56.328 116.937 6.770 1.00 90.56 O
ATOM 6 C5' A A 348 55.514 115.970 7.464 1.00 89.47 C
ATOM 7 C4' A A 348 54.122 115.930 6.875 1.00 88.64 C
ATOM 8 O4' A A 348 53.446 117.190 7.115 1.00 87.75 O
ATOM 9 C3' A A 348 54.054 115.761 5.370 1.00 89.23 C
ATOM 10 O3' A A 348 54.210 114.402 4.999 1.00 91.96 O
ATOM 11 C2' A A 348 52.673 116.313 5.044 1.00 88.11 C
ATOM 12 O2' A A 348 51.633 115.396 5.323 1.00 87.59 O
ATOM 13 C1' A A 348 52.580 117.479 6.029 1.00 87.05 C
ATOM 14 N9 A A 348 52.958 118.777 5.465 1.00 85.84 N
ATOM 15 C8 A A 348 54.136 119.468 5.635 1.00 85.18 C
ATOM 16 N7 A A 348 54.158 120.633 5.034 1.00 84.17 N
ATOM 17 C5 A A 348 52.915 120.715 4.420 1.00 84.90 C
ATOM 18 C6 A A 348 52.308 121.717 3.633 1.00 84.17 C
ATOM 19 N6 A A 348 52.893 122.881 3.331 1.00 83.22 N
ATOM 20 N1 A A 348 51.060 121.479 3.166 1.00 83.52 N
ATOM 21 C2 A A 348 50.470 120.317 3.477 1.00 83.77 C
ATOM 22 N3 A A 348 50.930 119.306 4.214 1.00 84.81 N
ATOM 23 C4 A A 348 52.172 119.571 4.663 1.00 85.35 C
ATOM 24 P C A 349 54.889 114.039 3.592 1.00 93.91 P
ATOM 25 OP1 C A 349 54.894 112.554 3.471 1.00 93.18 O
ATOM 26 OP2 C A 349 56.166 114.789 3.481 1.00 94.23 O
ATOM 27 O5' C A 349 53.869 114.635 2.526 1.00 94.59 O
TER
ATOM 1 O3' C B 279 55.605 129.298 -1.848 1.00 93.29 O
ATOM 2 P G B 280 55.050 130.160 -0.616 1.00 93.07 P
ATOM 3 OP1 G B 280 54.086 131.159 -1.156 1.00 92.47 O
ATOM 4 OP2 G B 280 56.221 130.623 0.176 1.00 92.74 O
ATOM 5 O5' G B 280 54.237 129.100 0.254 1.00 92.74 O
ATOM 6 C5' G B 280 53.032 128.483 -0.252 1.00 90.65 C
ATOM 7 C4' G B 280 52.650 127.295 0.604 1.00 89.27 C
ATOM 8 O4' G B 280 53.716 126.306 0.553 1.00 88.43 O
ATOM 9 C3' G B 280 52.484 127.576 2.089 1.00 88.84 C
ATOM 10 O3' G B 280 51.212 128.138 2.403 1.00 90.21 O
ATOM 11 C2' G B 280 52.716 126.200 2.700 1.00 87.51 C
ATOM 12 O2' G B 280 51.610 125.328 2.573 1.00 86.76 O
ATOM 13 C1' G B 280 53.859 125.687 1.824 1.00 86.10 C
ATOM 14 N9 G B 280 55.166 126.051 2.365 1.00 83.15 N
ATOM 15 C8 G B 280 55.840 127.238 2.184 1.00 81.71 C
ATOM 16 N7 G B 280 56.978 127.284 2.820 1.00 80.89 N
ATOM 17 C5 G B 280 57.068 126.051 3.453 1.00 80.99 C
ATOM 18 C6 G B 280 58.084 125.519 4.296 1.00 80.41 C
ATOM 19 O6 G B 280 59.143 126.049 4.654 1.00 79.39 O
ATOM 20 N1 G B 280 57.769 124.234 4.728 1.00 79.02 N
ATOM 21 C2 G B 280 56.630 123.547 4.392 1.00 79.37 C
ATOM 22 N2 G B 280 56.506 122.322 4.909 1.00 79.02 N
ATOM 23 N3 G B 280 55.679 124.027 3.605 1.00 80.24 N
ATOM 24 C4 G B 280 55.961 125.276 3.177 1.00 81.52 C
ATOM 25 P A B 281 51.020 128.956 3.778 1.00 91.96 P
ATOM 26 OP1 A B 281 49.704 129.654 3.708 1.00 91.09 O
ATOM 27 OP2 A B 281 52.259 129.745 4.033 1.00 91.61 O
ATOM 28 O5' A B 281 50.933 127.811 4.884 1.00 90.50 O
TER
Atoms:
OP1: (58.456,115.811,7.462)
OP2: (58.489,117.994,6.108)
C3': (54.054,115.761,5.370)
C1': (52.580,117.479,6.029)
C5': (55.514,115.970,7.464)
O4': (53.446,117.190,7.115)
C8: (54.136,119.468,5.635)
O2': (51.633,115.396,5.323)
C6: (52.308,121.717,3.633)
C5: (52.915,120.715,4.420)
C4: (52.172,119.571,4.663)
P: (57.864,117.143,7.152)
C4': (54.122,115.930,6.875)
C2': (52.673,116.313,5.044)
C2: (50.470,120.317,3.477)
N1: (51.060,121.479,3.166)
N3: (50.930,119.306,4.214)
N6: (52.893,122.881,3.331)
N7: (54.158,120.633,5.034)
N9: (52.958,118.777,5.465)
O5': (56.328,116.937,6.770)
O3': (54.210,114.402,4.999)
OP2: (58.489,117.994,6.108)
C3': (54.054,115.761,5.370)
C1': (52.580,117.479,6.029)
C5': (55.514,115.970,7.464)
O4': (53.446,117.190,7.115)
C8: (54.136,119.468,5.635)
O2': (51.633,115.396,5.323)
C6: (52.308,121.717,3.633)
C5: (52.915,120.715,4.420)
C4: (52.172,119.571,4.663)
P: (57.864,117.143,7.152)
C4': (54.122,115.930,6.875)
C2': (52.673,116.313,5.044)
C2: (50.470,120.317,3.477)
N1: (51.060,121.479,3.166)
N3: (50.930,119.306,4.214)
N6: (52.893,122.881,3.331)
N7: (54.158,120.633,5.034)
N9: (52.958,118.777,5.465)
O5': (56.328,116.937,6.770)
O3': (54.210,114.402,4.999)
OP1: (54.086,131.159,-1.156)
OP2: (56.221,130.623,0.176)
C3': (52.484,127.576,2.089)
C1': (53.859,125.687,1.824)
C5': (53.032,128.483,-0.252)
O6: (59.143,126.049,4.654)
O4': (53.716,126.306,0.553)
C8: (55.840,127.238,2.184)
C2: (56.630,123.547,4.392)
C6: (58.084,125.519,4.296)
C5: (57.068,126.051,3.453)
C4: (55.961,125.276,3.177)
P: (55.050,130.160,-0.616)
C4': (52.650,127.295,0.604)
C2': (52.716,126.200,2.700)
O2': (51.610,125.328,2.573)
N1: (57.769,124.234,4.728)
N2: (56.506,122.322,4.909)
N3: (55.679,124.027,3.605)
N7: (56.978,127.284,2.820)
N9: (55.166,126.051,2.365)
O5': (54.237,129.100,0.254)
O3': (51.212,128.138,2.403)
OP2: (56.221,130.623,0.176)
C3': (52.484,127.576,2.089)
C1': (53.859,125.687,1.824)
C5': (53.032,128.483,-0.252)
O6: (59.143,126.049,4.654)
O4': (53.716,126.306,0.553)
C8: (55.840,127.238,2.184)
C2: (56.630,123.547,4.392)
C6: (58.084,125.519,4.296)
C5: (57.068,126.051,3.453)
C4: (55.961,125.276,3.177)
P: (55.050,130.160,-0.616)
C4': (52.650,127.295,0.604)
C2': (52.716,126.200,2.700)
O2': (51.610,125.328,2.573)
N1: (57.769,124.234,4.728)
N2: (56.506,122.322,4.909)
N3: (55.679,124.027,3.605)
N7: (56.978,127.284,2.820)
N9: (55.166,126.051,2.365)
O5': (54.237,129.100,0.254)
O3': (51.212,128.138,2.403)
Image (generated by PyMOL):