Doublet info:
Details
Nucleotide types:
AG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJ9:015:0506
Extra
PDB:
ATOM 1 O3' G A 14 34.777 138.877 67.323 1.00 40.93 O
ATOM 2 P A A 15 35.126 138.115 65.957 1.00 42.95 P
ATOM 3 OP1 A A 15 36.594 137.889 65.887 1.00 44.13 O
ATOM 4 OP2 A A 15 34.446 138.822 64.853 1.00 43.25 O
ATOM 5 O5' A A 15 34.440 136.694 66.140 1.00 41.02 O
ATOM 6 C5' A A 15 34.918 135.772 67.125 1.00 39.54 C
ATOM 7 C4' A A 15 33.757 135.127 67.833 1.00 40.16 C
ATOM 8 O4' A A 15 33.017 136.133 68.572 1.00 41.58 O
ATOM 9 C3' A A 15 32.715 134.506 66.928 1.00 39.26 C
ATOM 10 O3' A A 15 33.132 133.225 66.470 1.00 40.59 O
ATOM 11 C2' A A 15 31.487 134.477 67.829 1.00 40.68 C
ATOM 12 O2' A A 15 31.453 133.441 68.777 1.00 40.60 O
ATOM 13 C1' A A 15 31.646 135.785 68.601 1.00 43.29 C
ATOM 14 N9 A A 15 30.869 136.872 68.010 1.00 48.32 N
ATOM 15 C8 A A 15 31.324 138.003 67.371 1.00 49.32 C
ATOM 16 N7 A A 15 30.365 138.780 66.934 1.00 50.72 N
ATOM 17 C5 A A 15 29.199 138.122 67.313 1.00 49.80 C
ATOM 18 C6 A A 15 27.840 138.427 67.135 1.00 50.22 C
ATOM 19 N6 A A 15 27.403 139.529 66.516 1.00 49.72 N
ATOM 20 N1 A A 15 26.931 137.550 67.621 1.00 50.69 N
ATOM 21 C2 A A 15 27.369 136.455 68.249 1.00 48.50 C
ATOM 22 N3 A A 15 28.614 136.065 68.484 1.00 48.30 N
ATOM 23 C4 A A 15 29.493 136.951 67.981 1.00 48.67 C
ATOM 24 P U A 16 32.766 132.754 64.971 1.00 42.19 P
ATOM 25 OP1 U A 16 33.226 131.348 64.778 1.00 40.00 O
ATOM 26 OP2 U A 16 33.213 133.808 64.017 1.00 41.90 O
ATOM 27 O5' U A 16 31.176 132.732 64.984 1.00 40.43 O
TER
ATOM 1 O3' U B 505 21.316 141.620 65.027 1.00 45.43 O
ATOM 2 P G B 506 21.027 142.313 66.451 1.00 49.17 P
ATOM 3 OP1 G B 506 19.888 141.565 67.049 1.00 48.24 O
ATOM 4 OP2 G B 506 20.935 143.795 66.275 1.00 46.53 O
ATOM 5 O5' G B 506 22.310 141.986 67.329 1.00 47.99 O
ATOM 6 C5' G B 506 22.849 140.661 67.358 1.00 47.66 C
ATOM 7 C4' G B 506 24.270 140.691 67.850 1.00 46.34 C
ATOM 8 O4' G B 506 25.126 141.353 66.868 1.00 45.35 O
ATOM 9 C3' G B 506 24.458 141.469 69.152 1.00 45.61 C
ATOM 10 O3' G B 506 25.325 140.754 70.016 1.00 45.00 O
ATOM 11 C2' G B 506 25.145 142.746 68.686 1.00 44.59 C
ATOM 12 O2' G B 506 25.928 143.347 69.693 1.00 43.84 O
ATOM 13 C1' G B 506 26.008 142.193 67.561 1.00 44.99 C
ATOM 14 N9 G B 506 26.595 143.184 66.662 1.00 45.59 N
ATOM 15 C8 G B 506 26.032 144.354 66.202 1.00 46.19 C
ATOM 16 N7 G B 506 26.879 145.107 65.549 1.00 44.51 N
ATOM 17 C5 G B 506 28.057 144.372 65.546 1.00 45.98 C
ATOM 18 C6 G B 506 29.340 144.683 65.018 1.00 45.48 C
ATOM 19 O6 G B 506 29.712 145.715 64.440 1.00 47.05 O
ATOM 20 N1 G B 506 30.241 143.649 65.232 1.00 44.06 N
ATOM 21 C2 G B 506 29.956 142.471 65.874 1.00 45.31 C
ATOM 22 N2 G B 506 30.967 141.594 65.986 1.00 45.11 N
ATOM 23 N3 G B 506 28.774 142.172 66.376 1.00 44.87 N
ATOM 24 C4 G B 506 27.881 143.161 66.185 1.00 45.56 C
ATOM 25 P A B 507 25.119 140.855 71.601 1.00 45.12 P
ATOM 26 OP1 A B 507 23.698 141.151 71.903 1.00 45.31 O
ATOM 27 OP2 A B 507 26.176 141.768 72.101 1.00 44.51 O
ATOM 28 O5' A B 507 25.412 139.376 72.104 1.00 43.07 O
TER
ATOM 2 P A A 15 35.126 138.115 65.957 1.00 42.95 P
ATOM 3 OP1 A A 15 36.594 137.889 65.887 1.00 44.13 O
ATOM 4 OP2 A A 15 34.446 138.822 64.853 1.00 43.25 O
ATOM 5 O5' A A 15 34.440 136.694 66.140 1.00 41.02 O
ATOM 6 C5' A A 15 34.918 135.772 67.125 1.00 39.54 C
ATOM 7 C4' A A 15 33.757 135.127 67.833 1.00 40.16 C
ATOM 8 O4' A A 15 33.017 136.133 68.572 1.00 41.58 O
ATOM 9 C3' A A 15 32.715 134.506 66.928 1.00 39.26 C
ATOM 10 O3' A A 15 33.132 133.225 66.470 1.00 40.59 O
ATOM 11 C2' A A 15 31.487 134.477 67.829 1.00 40.68 C
ATOM 12 O2' A A 15 31.453 133.441 68.777 1.00 40.60 O
ATOM 13 C1' A A 15 31.646 135.785 68.601 1.00 43.29 C
ATOM 14 N9 A A 15 30.869 136.872 68.010 1.00 48.32 N
ATOM 15 C8 A A 15 31.324 138.003 67.371 1.00 49.32 C
ATOM 16 N7 A A 15 30.365 138.780 66.934 1.00 50.72 N
ATOM 17 C5 A A 15 29.199 138.122 67.313 1.00 49.80 C
ATOM 18 C6 A A 15 27.840 138.427 67.135 1.00 50.22 C
ATOM 19 N6 A A 15 27.403 139.529 66.516 1.00 49.72 N
ATOM 20 N1 A A 15 26.931 137.550 67.621 1.00 50.69 N
ATOM 21 C2 A A 15 27.369 136.455 68.249 1.00 48.50 C
ATOM 22 N3 A A 15 28.614 136.065 68.484 1.00 48.30 N
ATOM 23 C4 A A 15 29.493 136.951 67.981 1.00 48.67 C
ATOM 24 P U A 16 32.766 132.754 64.971 1.00 42.19 P
ATOM 25 OP1 U A 16 33.226 131.348 64.778 1.00 40.00 O
ATOM 26 OP2 U A 16 33.213 133.808 64.017 1.00 41.90 O
ATOM 27 O5' U A 16 31.176 132.732 64.984 1.00 40.43 O
TER
ATOM 1 O3' U B 505 21.316 141.620 65.027 1.00 45.43 O
ATOM 2 P G B 506 21.027 142.313 66.451 1.00 49.17 P
ATOM 3 OP1 G B 506 19.888 141.565 67.049 1.00 48.24 O
ATOM 4 OP2 G B 506 20.935 143.795 66.275 1.00 46.53 O
ATOM 5 O5' G B 506 22.310 141.986 67.329 1.00 47.99 O
ATOM 6 C5' G B 506 22.849 140.661 67.358 1.00 47.66 C
ATOM 7 C4' G B 506 24.270 140.691 67.850 1.00 46.34 C
ATOM 8 O4' G B 506 25.126 141.353 66.868 1.00 45.35 O
ATOM 9 C3' G B 506 24.458 141.469 69.152 1.00 45.61 C
ATOM 10 O3' G B 506 25.325 140.754 70.016 1.00 45.00 O
ATOM 11 C2' G B 506 25.145 142.746 68.686 1.00 44.59 C
ATOM 12 O2' G B 506 25.928 143.347 69.693 1.00 43.84 O
ATOM 13 C1' G B 506 26.008 142.193 67.561 1.00 44.99 C
ATOM 14 N9 G B 506 26.595 143.184 66.662 1.00 45.59 N
ATOM 15 C8 G B 506 26.032 144.354 66.202 1.00 46.19 C
ATOM 16 N7 G B 506 26.879 145.107 65.549 1.00 44.51 N
ATOM 17 C5 G B 506 28.057 144.372 65.546 1.00 45.98 C
ATOM 18 C6 G B 506 29.340 144.683 65.018 1.00 45.48 C
ATOM 19 O6 G B 506 29.712 145.715 64.440 1.00 47.05 O
ATOM 20 N1 G B 506 30.241 143.649 65.232 1.00 44.06 N
ATOM 21 C2 G B 506 29.956 142.471 65.874 1.00 45.31 C
ATOM 22 N2 G B 506 30.967 141.594 65.986 1.00 45.11 N
ATOM 23 N3 G B 506 28.774 142.172 66.376 1.00 44.87 N
ATOM 24 C4 G B 506 27.881 143.161 66.185 1.00 45.56 C
ATOM 25 P A B 507 25.119 140.855 71.601 1.00 45.12 P
ATOM 26 OP1 A B 507 23.698 141.151 71.903 1.00 45.31 O
ATOM 27 OP2 A B 507 26.176 141.768 72.101 1.00 44.51 O
ATOM 28 O5' A B 507 25.412 139.376 72.104 1.00 43.07 O
TER
Atoms:
OP1: (36.594,137.889,65.887)
OP2: (34.446,138.822,64.853)
C3': (32.715,134.506,66.928)
C1': (31.646,135.785,68.601)
C5': (34.918,135.772,67.125)
O4': (33.017,136.133,68.572)
C8: (31.324,138.003,67.371)
O2': (31.453,133.441,68.777)
C6: (27.840,138.427,67.135)
C5: (29.199,138.122,67.313)
C4: (29.493,136.951,67.981)
P: (35.126,138.115,65.957)
C4': (33.757,135.127,67.833)
C2': (31.487,134.477,67.829)
C2: (27.369,136.455,68.249)
N1: (26.931,137.550,67.621)
N3: (28.614,136.065,68.484)
N6: (27.403,139.529,66.516)
N7: (30.365,138.780,66.934)
N9: (30.869,136.872,68.010)
O5': (34.440,136.694,66.140)
O3': (33.132,133.225,66.470)
OP2: (34.446,138.822,64.853)
C3': (32.715,134.506,66.928)
C1': (31.646,135.785,68.601)
C5': (34.918,135.772,67.125)
O4': (33.017,136.133,68.572)
C8: (31.324,138.003,67.371)
O2': (31.453,133.441,68.777)
C6: (27.840,138.427,67.135)
C5: (29.199,138.122,67.313)
C4: (29.493,136.951,67.981)
P: (35.126,138.115,65.957)
C4': (33.757,135.127,67.833)
C2': (31.487,134.477,67.829)
C2: (27.369,136.455,68.249)
N1: (26.931,137.550,67.621)
N3: (28.614,136.065,68.484)
N6: (27.403,139.529,66.516)
N7: (30.365,138.780,66.934)
N9: (30.869,136.872,68.010)
O5': (34.440,136.694,66.140)
O3': (33.132,133.225,66.470)
OP1: (19.888,141.565,67.049)
OP2: (20.935,143.795,66.275)
C3': (24.458,141.469,69.152)
C1': (26.008,142.193,67.561)
C5': (22.849,140.661,67.358)
O6: (29.712,145.715,64.440)
O4': (25.126,141.353,66.868)
C8: (26.032,144.354,66.202)
C2: (29.956,142.471,65.874)
C6: (29.340,144.683,65.018)
C5: (28.057,144.372,65.546)
C4: (27.881,143.161,66.185)
P: (21.027,142.313,66.451)
C4': (24.270,140.691,67.850)
C2': (25.145,142.746,68.686)
O2': (25.928,143.347,69.693)
N1: (30.241,143.649,65.232)
N2: (30.967,141.594,65.986)
N3: (28.774,142.172,66.376)
N7: (26.879,145.107,65.549)
N9: (26.595,143.184,66.662)
O5': (22.310,141.986,67.329)
O3': (25.325,140.754,70.016)
OP2: (20.935,143.795,66.275)
C3': (24.458,141.469,69.152)
C1': (26.008,142.193,67.561)
C5': (22.849,140.661,67.358)
O6: (29.712,145.715,64.440)
O4': (25.126,141.353,66.868)
C8: (26.032,144.354,66.202)
C2: (29.956,142.471,65.874)
C6: (29.340,144.683,65.018)
C5: (28.057,144.372,65.546)
C4: (27.881,143.161,66.185)
P: (21.027,142.313,66.451)
C4': (24.270,140.691,67.850)
C2': (25.145,142.746,68.686)
O2': (25.928,143.347,69.693)
N1: (30.241,143.649,65.232)
N2: (30.967,141.594,65.986)
N3: (28.774,142.172,66.376)
N7: (26.879,145.107,65.549)
N9: (26.595,143.184,66.662)
O5': (22.310,141.986,67.329)
O3': (25.325,140.754,70.016)
Image (generated by PyMOL):