Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VQM:01878:0407
Extra
PDB:
ATOM 1 O3' A A1877 97.439 75.450 29.548 1.00 81.97 O
ATOM 2 P C A1878 97.958 76.063 30.943 1.00 79.53 P
ATOM 3 OP1 C A1878 99.448 76.086 30.893 1.00 80.01 O
ATOM 4 OP2 C A1878 97.276 75.338 32.047 1.00 79.39 O
ATOM 5 O5' C A1878 97.444 77.572 30.925 1.00 76.87 O
ATOM 6 C5' C A1878 98.101 78.566 30.116 1.00 72.08 C
ATOM 7 C4' C A1878 97.342 79.869 30.168 1.00 68.94 C
ATOM 8 O4' C A1878 95.999 79.662 29.668 1.00 68.10 O
ATOM 9 C3' C A1878 97.139 80.463 31.553 1.00 67.34 C
ATOM 10 O3' C A1878 98.285 81.214 31.931 1.00 65.58 O
ATOM 11 C2' C A1878 95.912 81.353 31.357 1.00 67.27 C
ATOM 12 O2' C A1878 96.195 82.630 30.815 1.00 64.52 O
ATOM 13 C1' C A1878 95.111 80.549 30.327 1.00 67.76 C
ATOM 14 N1 C A1878 93.961 79.789 30.857 1.00 67.82 N
ATOM 15 C2 C A1878 92.843 80.500 31.319 1.00 66.90 C
ATOM 16 O2 C A1878 92.875 81.744 31.319 1.00 66.86 O
ATOM 17 N3 C A1878 91.764 79.818 31.758 1.00 66.50 N
ATOM 18 C4 C A1878 91.772 78.484 31.763 1.00 66.80 C
ATOM 19 N4 C A1878 90.673 77.857 32.193 1.00 66.37 N
ATOM 20 C5 C A1878 92.902 77.735 31.324 1.00 66.18 C
ATOM 21 C6 C A1878 93.965 78.420 30.885 1.00 66.87 C
ATOM 22 P A A1879 98.647 81.410 33.482 1.00 66.70 P
ATOM 23 OP1 A A1879 99.633 82.520 33.530 1.00 66.92 O
ATOM 24 OP2 A A1879 99.019 80.090 34.042 1.00 69.72 O
ATOM 25 O5' A A1879 97.278 81.882 34.166 1.00 65.63 O
TER
ATOM 1 O3' C B 406 83.206 84.671 33.323 1.00 55.55 O
ATOM 2 P A B 407 83.894 84.432 31.893 1.00 55.45 P
ATOM 3 OP1 A B 407 84.304 85.770 31.389 1.00 57.90 O
ATOM 4 OP2 A B 407 82.986 83.588 31.078 1.00 56.51 O
ATOM 5 O5' A B 407 85.202 83.590 32.227 1.00 53.00 O
ATOM 6 C5' A B 407 86.354 84.222 32.807 1.00 53.72 C
ATOM 7 C4' A B 407 87.526 83.277 32.786 1.00 55.16 C
ATOM 8 O4' A B 407 87.247 82.136 33.641 1.00 56.25 O
ATOM 9 C3' A B 407 87.812 82.667 31.427 1.00 55.67 C
ATOM 10 O3' A B 407 88.595 83.548 30.638 1.00 57.47 O
ATOM 11 C2' A B 407 88.536 81.382 31.794 1.00 55.31 C
ATOM 12 O2' A B 407 89.882 81.620 32.141 1.00 56.46 O
ATOM 13 C1' A B 407 87.761 80.956 33.045 1.00 54.67 C
ATOM 14 N9 A B 407 86.632 80.066 32.765 1.00 53.82 N
ATOM 15 C8 A B 407 85.317 80.413 32.545 1.00 52.52 C
ATOM 16 N7 A B 407 84.529 79.388 32.325 1.00 50.46 N
ATOM 17 C5 A B 407 85.378 78.293 32.406 1.00 51.21 C
ATOM 18 C6 A B 407 85.155 76.915 32.263 1.00 50.40 C
ATOM 19 N6 A B 407 83.961 76.382 32.018 1.00 46.58 N
ATOM 20 N1 A B 407 86.216 76.094 32.383 1.00 51.27 N
ATOM 21 C2 A B 407 87.418 76.629 32.634 1.00 51.22 C
ATOM 22 N3 A B 407 87.754 77.903 32.795 1.00 52.00 N
ATOM 23 C4 A B 407 86.676 78.695 32.668 1.00 51.78 C
ATOM 24 P U B 408 88.464 83.512 29.040 1.00 57.39 P
ATOM 25 OP1 U B 408 89.266 84.646 28.522 1.00 59.13 O
ATOM 26 OP2 U B 408 87.031 83.403 28.674 1.00 55.89 O
ATOM 27 O5' U B 408 89.202 82.157 28.651 1.00 58.64 O
TER
ATOM 2 P C A1878 97.958 76.063 30.943 1.00 79.53 P
ATOM 3 OP1 C A1878 99.448 76.086 30.893 1.00 80.01 O
ATOM 4 OP2 C A1878 97.276 75.338 32.047 1.00 79.39 O
ATOM 5 O5' C A1878 97.444 77.572 30.925 1.00 76.87 O
ATOM 6 C5' C A1878 98.101 78.566 30.116 1.00 72.08 C
ATOM 7 C4' C A1878 97.342 79.869 30.168 1.00 68.94 C
ATOM 8 O4' C A1878 95.999 79.662 29.668 1.00 68.10 O
ATOM 9 C3' C A1878 97.139 80.463 31.553 1.00 67.34 C
ATOM 10 O3' C A1878 98.285 81.214 31.931 1.00 65.58 O
ATOM 11 C2' C A1878 95.912 81.353 31.357 1.00 67.27 C
ATOM 12 O2' C A1878 96.195 82.630 30.815 1.00 64.52 O
ATOM 13 C1' C A1878 95.111 80.549 30.327 1.00 67.76 C
ATOM 14 N1 C A1878 93.961 79.789 30.857 1.00 67.82 N
ATOM 15 C2 C A1878 92.843 80.500 31.319 1.00 66.90 C
ATOM 16 O2 C A1878 92.875 81.744 31.319 1.00 66.86 O
ATOM 17 N3 C A1878 91.764 79.818 31.758 1.00 66.50 N
ATOM 18 C4 C A1878 91.772 78.484 31.763 1.00 66.80 C
ATOM 19 N4 C A1878 90.673 77.857 32.193 1.00 66.37 N
ATOM 20 C5 C A1878 92.902 77.735 31.324 1.00 66.18 C
ATOM 21 C6 C A1878 93.965 78.420 30.885 1.00 66.87 C
ATOM 22 P A A1879 98.647 81.410 33.482 1.00 66.70 P
ATOM 23 OP1 A A1879 99.633 82.520 33.530 1.00 66.92 O
ATOM 24 OP2 A A1879 99.019 80.090 34.042 1.00 69.72 O
ATOM 25 O5' A A1879 97.278 81.882 34.166 1.00 65.63 O
TER
ATOM 1 O3' C B 406 83.206 84.671 33.323 1.00 55.55 O
ATOM 2 P A B 407 83.894 84.432 31.893 1.00 55.45 P
ATOM 3 OP1 A B 407 84.304 85.770 31.389 1.00 57.90 O
ATOM 4 OP2 A B 407 82.986 83.588 31.078 1.00 56.51 O
ATOM 5 O5' A B 407 85.202 83.590 32.227 1.00 53.00 O
ATOM 6 C5' A B 407 86.354 84.222 32.807 1.00 53.72 C
ATOM 7 C4' A B 407 87.526 83.277 32.786 1.00 55.16 C
ATOM 8 O4' A B 407 87.247 82.136 33.641 1.00 56.25 O
ATOM 9 C3' A B 407 87.812 82.667 31.427 1.00 55.67 C
ATOM 10 O3' A B 407 88.595 83.548 30.638 1.00 57.47 O
ATOM 11 C2' A B 407 88.536 81.382 31.794 1.00 55.31 C
ATOM 12 O2' A B 407 89.882 81.620 32.141 1.00 56.46 O
ATOM 13 C1' A B 407 87.761 80.956 33.045 1.00 54.67 C
ATOM 14 N9 A B 407 86.632 80.066 32.765 1.00 53.82 N
ATOM 15 C8 A B 407 85.317 80.413 32.545 1.00 52.52 C
ATOM 16 N7 A B 407 84.529 79.388 32.325 1.00 50.46 N
ATOM 17 C5 A B 407 85.378 78.293 32.406 1.00 51.21 C
ATOM 18 C6 A B 407 85.155 76.915 32.263 1.00 50.40 C
ATOM 19 N6 A B 407 83.961 76.382 32.018 1.00 46.58 N
ATOM 20 N1 A B 407 86.216 76.094 32.383 1.00 51.27 N
ATOM 21 C2 A B 407 87.418 76.629 32.634 1.00 51.22 C
ATOM 22 N3 A B 407 87.754 77.903 32.795 1.00 52.00 N
ATOM 23 C4 A B 407 86.676 78.695 32.668 1.00 51.78 C
ATOM 24 P U B 408 88.464 83.512 29.040 1.00 57.39 P
ATOM 25 OP1 U B 408 89.266 84.646 28.522 1.00 59.13 O
ATOM 26 OP2 U B 408 87.031 83.403 28.674 1.00 55.89 O
ATOM 27 O5' U B 408 89.202 82.157 28.651 1.00 58.64 O
TER
Atoms:
C2: (92.843,80.500,31.319)
OP1: (99.448,76.086,30.893)
OP2: (97.276,75.338,32.047)
C4: (91.772,78.484,31.763)
O5': (97.444,77.572,30.925)
C3': (97.139,80.463,31.553)
C1': (95.111,80.549,30.327)
O4': (95.999,79.662,29.668)
C5': (98.101,78.566,30.116)
P: (97.958,76.063,30.943)
O2: (92.875,81.744,31.319)
C4': (97.342,79.869,30.168)
C2': (95.912,81.353,31.357)
O2': (96.195,82.630,30.815)
N1: (93.961,79.789,30.857)
N3: (91.764,79.818,31.758)
N4: (90.673,77.857,32.193)
C6: (93.965,78.420,30.885)
C5: (92.902,77.735,31.324)
O3': (98.285,81.214,31.931)
OP1: (99.448,76.086,30.893)
OP2: (97.276,75.338,32.047)
C4: (91.772,78.484,31.763)
O5': (97.444,77.572,30.925)
C3': (97.139,80.463,31.553)
C1': (95.111,80.549,30.327)
O4': (95.999,79.662,29.668)
C5': (98.101,78.566,30.116)
P: (97.958,76.063,30.943)
O2: (92.875,81.744,31.319)
C4': (97.342,79.869,30.168)
C2': (95.912,81.353,31.357)
O2': (96.195,82.630,30.815)
N1: (93.961,79.789,30.857)
N3: (91.764,79.818,31.758)
N4: (90.673,77.857,32.193)
C6: (93.965,78.420,30.885)
C5: (92.902,77.735,31.324)
O3': (98.285,81.214,31.931)
OP1: (84.304,85.770,31.389)
OP2: (82.986,83.588,31.078)
C3': (87.812,82.667,31.427)
C1': (87.761,80.956,33.045)
C5': (86.354,84.222,32.807)
O4': (87.247,82.136,33.641)
C8: (85.317,80.413,32.545)
O2': (89.882,81.620,32.141)
C6: (85.155,76.915,32.263)
C5: (85.378,78.293,32.406)
C4: (86.676,78.695,32.668)
P: (83.894,84.432,31.893)
C4': (87.526,83.277,32.786)
C2': (88.536,81.382,31.794)
C2: (87.418,76.629,32.634)
N1: (86.216,76.094,32.383)
N3: (87.754,77.903,32.795)
N6: (83.961,76.382,32.018)
N7: (84.529,79.388,32.325)
N9: (86.632,80.066,32.765)
O5': (85.202,83.590,32.227)
O3': (88.595,83.548,30.638)
OP2: (82.986,83.588,31.078)
C3': (87.812,82.667,31.427)
C1': (87.761,80.956,33.045)
C5': (86.354,84.222,32.807)
O4': (87.247,82.136,33.641)
C8: (85.317,80.413,32.545)
O2': (89.882,81.620,32.141)
C6: (85.155,76.915,32.263)
C5: (85.378,78.293,32.406)
C4: (86.676,78.695,32.668)
P: (83.894,84.432,31.893)
C4': (87.526,83.277,32.786)
C2': (88.536,81.382,31.794)
C2: (87.418,76.629,32.634)
N1: (86.216,76.094,32.383)
N3: (87.754,77.903,32.795)
N6: (83.961,76.382,32.018)
N7: (84.529,79.388,32.325)
N9: (86.632,80.066,32.765)
O5': (85.202,83.590,32.227)
O3': (88.595,83.548,30.638)
Image (generated by PyMOL):