Doublet info:
Details
Nucleotide types:
AG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3KNI:A2088:A2040
Extra
PDB:
ATOM 1 O3' U A2087 115.988 22.346 -90.997 1.00189.15 O
ATOM 2 P A A2088 114.756 22.762 -90.035 1.00198.76 P
ATOM 3 OP1 A A2088 115.153 23.742 -88.986 1.00197.09 O
ATOM 4 OP2 A A2088 114.093 21.496 -89.630 1.00190.56 O
ATOM 5 O5' A A2088 113.737 23.525 -90.992 1.00191.60 O
ATOM 6 C5' A A2088 113.193 24.773 -90.586 1.00186.67 C
ATOM 7 C4' A A2088 112.661 25.534 -91.768 1.00186.53 C
ATOM 8 O4' A A2088 113.721 25.692 -92.748 1.00187.15 O
ATOM 9 C3' A A2088 111.459 24.916 -92.472 1.00189.86 C
ATOM 10 O3' A A2088 110.358 25.818 -92.564 1.00191.26 O
ATOM 11 C2' A A2088 112.002 24.431 -93.818 1.00189.13 C
ATOM 12 O2' A A2088 111.160 24.702 -94.918 1.00186.64 O
ATOM 13 C1' A A2088 113.283 25.240 -94.016 1.00189.30 C
ATOM 14 N9 A A2088 114.291 24.330 -94.567 1.00189.12 N
ATOM 15 C8 A A2088 115.461 23.898 -93.990 1.00188.96 C
ATOM 16 N7 A A2088 116.106 23.010 -94.704 1.00189.39 N
ATOM 17 C5 A A2088 115.321 22.857 -95.839 1.00190.14 C
ATOM 18 C6 A A2088 115.458 22.049 -96.982 1.00190.45 C
ATOM 19 N6 A A2088 116.467 21.192 -97.166 1.00189.33 N
ATOM 20 N1 A A2088 114.508 22.143 -97.937 1.00190.50 N
ATOM 21 C2 A A2088 113.486 22.987 -97.743 1.00188.74 C
ATOM 22 N3 A A2088 113.241 23.790 -96.709 1.00188.03 N
ATOM 23 C4 A A2088 114.210 23.678 -95.780 1.00189.37 C
ATOM 24 P C A2089 108.883 25.300 -92.162 1.00188.54 P
ATOM 25 OP1 C A2089 107.895 26.384 -92.415 1.00186.28 O
ATOM 26 OP2 C A2089 108.952 24.676 -90.819 1.00188.94 O
ATOM 27 O5' C A2089 108.622 24.119 -93.194 1.00189.03 O
TER
ATOM 1 O3' G B2039 118.052 11.986 -99.118 1.00174.15 O
ATOM 2 P G B2040 119.119 12.911 -99.884 1.00170.61 P
ATOM 3 OP1 G B2040 118.948 12.674-101.340 1.00172.29 O
ATOM 4 OP2 G B2040 120.441 12.663 -99.249 1.00171.51 O
ATOM 5 O5' G B2040 118.668 14.405 -99.543 1.00176.96 O
ATOM 6 C5' G B2040 117.520 14.990-100.161 1.00176.85 C
ATOM 7 C4' G B2040 117.326 16.419 -99.688 1.00177.17 C
ATOM 8 O4' G B2040 116.889 16.431 -98.300 1.00176.13 O
ATOM 9 C3' G B2040 118.557 17.316 -99.688 1.00181.57 C
ATOM 10 O3' G B2040 118.901 17.887-100.944 1.00184.73 O
ATOM 11 C2' G B2040 118.194 18.390 -98.671 1.00184.34 C
ATOM 12 O2' G B2040 117.423 19.440 -99.212 1.00190.38 O
ATOM 13 C1' G B2040 117.384 17.594 -97.651 1.00179.54 C
ATOM 14 N9 G B2040 118.249 17.197 -96.543 1.00178.55 N
ATOM 15 C8 G B2040 119.166 16.175 -96.538 1.00177.88 C
ATOM 16 N7 G B2040 119.842 16.097 -95.426 1.00177.56 N
ATOM 17 C5 G B2040 119.333 17.120 -94.639 1.00178.16 C
ATOM 18 C6 G B2040 119.677 17.526 -93.324 1.00178.56 C
ATOM 19 O6 G B2040 120.534 17.052 -92.568 1.00178.89 O
ATOM 20 N1 G B2040 118.909 18.605 -92.905 1.00178.33 N
ATOM 21 C2 G B2040 117.939 19.221 -93.651 1.00179.86 C
ATOM 22 N2 G B2040 117.317 20.252 -93.065 1.00179.16 N
ATOM 23 N3 G B2040 117.608 18.856 -94.880 1.00181.60 N
ATOM 24 C4 G B2040 118.340 17.804 -95.309 1.00179.70 C
ATOM 25 P A B2041 120.436 18.283-101.219 1.00188.50 P
ATOM 26 OP1 A B2041 121.190 17.018-101.419 1.00188.89 O
ATOM 27 OP2 A B2041 120.864 19.228-100.156 1.00187.06 O
ATOM 28 O5' A B2041 120.431 19.080-102.598 1.00186.60 O
TER
ATOM 2 P A A2088 114.756 22.762 -90.035 1.00198.76 P
ATOM 3 OP1 A A2088 115.153 23.742 -88.986 1.00197.09 O
ATOM 4 OP2 A A2088 114.093 21.496 -89.630 1.00190.56 O
ATOM 5 O5' A A2088 113.737 23.525 -90.992 1.00191.60 O
ATOM 6 C5' A A2088 113.193 24.773 -90.586 1.00186.67 C
ATOM 7 C4' A A2088 112.661 25.534 -91.768 1.00186.53 C
ATOM 8 O4' A A2088 113.721 25.692 -92.748 1.00187.15 O
ATOM 9 C3' A A2088 111.459 24.916 -92.472 1.00189.86 C
ATOM 10 O3' A A2088 110.358 25.818 -92.564 1.00191.26 O
ATOM 11 C2' A A2088 112.002 24.431 -93.818 1.00189.13 C
ATOM 12 O2' A A2088 111.160 24.702 -94.918 1.00186.64 O
ATOM 13 C1' A A2088 113.283 25.240 -94.016 1.00189.30 C
ATOM 14 N9 A A2088 114.291 24.330 -94.567 1.00189.12 N
ATOM 15 C8 A A2088 115.461 23.898 -93.990 1.00188.96 C
ATOM 16 N7 A A2088 116.106 23.010 -94.704 1.00189.39 N
ATOM 17 C5 A A2088 115.321 22.857 -95.839 1.00190.14 C
ATOM 18 C6 A A2088 115.458 22.049 -96.982 1.00190.45 C
ATOM 19 N6 A A2088 116.467 21.192 -97.166 1.00189.33 N
ATOM 20 N1 A A2088 114.508 22.143 -97.937 1.00190.50 N
ATOM 21 C2 A A2088 113.486 22.987 -97.743 1.00188.74 C
ATOM 22 N3 A A2088 113.241 23.790 -96.709 1.00188.03 N
ATOM 23 C4 A A2088 114.210 23.678 -95.780 1.00189.37 C
ATOM 24 P C A2089 108.883 25.300 -92.162 1.00188.54 P
ATOM 25 OP1 C A2089 107.895 26.384 -92.415 1.00186.28 O
ATOM 26 OP2 C A2089 108.952 24.676 -90.819 1.00188.94 O
ATOM 27 O5' C A2089 108.622 24.119 -93.194 1.00189.03 O
TER
ATOM 1 O3' G B2039 118.052 11.986 -99.118 1.00174.15 O
ATOM 2 P G B2040 119.119 12.911 -99.884 1.00170.61 P
ATOM 3 OP1 G B2040 118.948 12.674-101.340 1.00172.29 O
ATOM 4 OP2 G B2040 120.441 12.663 -99.249 1.00171.51 O
ATOM 5 O5' G B2040 118.668 14.405 -99.543 1.00176.96 O
ATOM 6 C5' G B2040 117.520 14.990-100.161 1.00176.85 C
ATOM 7 C4' G B2040 117.326 16.419 -99.688 1.00177.17 C
ATOM 8 O4' G B2040 116.889 16.431 -98.300 1.00176.13 O
ATOM 9 C3' G B2040 118.557 17.316 -99.688 1.00181.57 C
ATOM 10 O3' G B2040 118.901 17.887-100.944 1.00184.73 O
ATOM 11 C2' G B2040 118.194 18.390 -98.671 1.00184.34 C
ATOM 12 O2' G B2040 117.423 19.440 -99.212 1.00190.38 O
ATOM 13 C1' G B2040 117.384 17.594 -97.651 1.00179.54 C
ATOM 14 N9 G B2040 118.249 17.197 -96.543 1.00178.55 N
ATOM 15 C8 G B2040 119.166 16.175 -96.538 1.00177.88 C
ATOM 16 N7 G B2040 119.842 16.097 -95.426 1.00177.56 N
ATOM 17 C5 G B2040 119.333 17.120 -94.639 1.00178.16 C
ATOM 18 C6 G B2040 119.677 17.526 -93.324 1.00178.56 C
ATOM 19 O6 G B2040 120.534 17.052 -92.568 1.00178.89 O
ATOM 20 N1 G B2040 118.909 18.605 -92.905 1.00178.33 N
ATOM 21 C2 G B2040 117.939 19.221 -93.651 1.00179.86 C
ATOM 22 N2 G B2040 117.317 20.252 -93.065 1.00179.16 N
ATOM 23 N3 G B2040 117.608 18.856 -94.880 1.00181.60 N
ATOM 24 C4 G B2040 118.340 17.804 -95.309 1.00179.70 C
ATOM 25 P A B2041 120.436 18.283-101.219 1.00188.50 P
ATOM 26 OP1 A B2041 121.190 17.018-101.419 1.00188.89 O
ATOM 27 OP2 A B2041 120.864 19.228-100.156 1.00187.06 O
ATOM 28 O5' A B2041 120.431 19.080-102.598 1.00186.60 O
TER
Atoms:
OP1: (115.153,23.742,-88.986)
OP2: (114.093,21.496,-89.630)
C3': (111.459,24.916,-92.472)
C1': (113.283,25.240,-94.016)
C5': (113.193,24.773,-90.586)
O4': (113.721,25.692,-92.748)
C8: (115.461,23.898,-93.990)
O2': (111.160,24.702,-94.918)
C6: (115.458,22.049,-96.982)
C5: (115.321,22.857,-95.839)
C4: (114.210,23.678,-95.780)
P: (114.756,22.762,-90.035)
C4': (112.661,25.534,-91.768)
C2': (112.002,24.431,-93.818)
C2: (113.486,22.987,-97.743)
N1: (114.508,22.143,-97.937)
N3: (113.241,23.790,-96.709)
N6: (116.467,21.192,-97.166)
N7: (116.106,23.010,-94.704)
N9: (114.291,24.330,-94.567)
O5': (113.737,23.525,-90.992)
O3': (110.358,25.818,-92.564)
OP2: (114.093,21.496,-89.630)
C3': (111.459,24.916,-92.472)
C1': (113.283,25.240,-94.016)
C5': (113.193,24.773,-90.586)
O4': (113.721,25.692,-92.748)
C8: (115.461,23.898,-93.990)
O2': (111.160,24.702,-94.918)
C6: (115.458,22.049,-96.982)
C5: (115.321,22.857,-95.839)
C4: (114.210,23.678,-95.780)
P: (114.756,22.762,-90.035)
C4': (112.661,25.534,-91.768)
C2': (112.002,24.431,-93.818)
C2: (113.486,22.987,-97.743)
N1: (114.508,22.143,-97.937)
N3: (113.241,23.790,-96.709)
N6: (116.467,21.192,-97.166)
N7: (116.106,23.010,-94.704)
N9: (114.291,24.330,-94.567)
O5': (113.737,23.525,-90.992)
O3': (110.358,25.818,-92.564)
OP1: (118.948,12.674,-101.340)
OP2: (120.441,12.663,-99.249)
C3': (118.557,17.316,-99.688)
C1': (117.384,17.594,-97.651)
C5': (117.520,14.990,-100.161)
O6: (120.534,17.052,-92.568)
O4': (116.889,16.431,-98.300)
C8: (119.166,16.175,-96.538)
C2: (117.939,19.221,-93.651)
C6: (119.677,17.526,-93.324)
C5: (119.333,17.120,-94.639)
C4: (118.340,17.804,-95.309)
P: (119.119,12.911,-99.884)
C4': (117.326,16.419,-99.688)
C2': (118.194,18.390,-98.671)
O2': (117.423,19.440,-99.212)
N1: (118.909,18.605,-92.905)
N2: (117.317,20.252,-93.065)
N3: (117.608,18.856,-94.880)
N7: (119.842,16.097,-95.426)
N9: (118.249,17.197,-96.543)
O5': (118.668,14.405,-99.543)
O3': (118.901,17.887,-100.944)
OP2: (120.441,12.663,-99.249)
C3': (118.557,17.316,-99.688)
C1': (117.384,17.594,-97.651)
C5': (117.520,14.990,-100.161)
O6: (120.534,17.052,-92.568)
O4': (116.889,16.431,-98.300)
C8: (119.166,16.175,-96.538)
C2: (117.939,19.221,-93.651)
C6: (119.677,17.526,-93.324)
C5: (119.333,17.120,-94.639)
C4: (118.340,17.804,-95.309)
P: (119.119,12.911,-99.884)
C4': (117.326,16.419,-99.688)
C2': (118.194,18.390,-98.671)
O2': (117.423,19.440,-99.212)
N1: (118.909,18.605,-92.905)
N2: (117.317,20.252,-93.065)
N3: (117.608,18.856,-94.880)
N7: (119.842,16.097,-95.426)
N9: (118.249,17.197,-96.543)
O5': (118.668,14.405,-99.543)
O3': (118.901,17.887,-100.944)
Image (generated by PyMOL):