Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJ9:935:946
Extra
PDB:
ATOM 1 O3' C A 34 83.934 12.224 79.812 1.00 80.85 O
ATOM 2 P C A 35 84.541 13.709 79.713 1.00 81.87 P
ATOM 3 OP1 C A 35 85.147 13.825 78.358 1.00 81.64 O
ATOM 4 OP2 C A 35 85.370 14.001 80.918 1.00 79.96 O
ATOM 5 O5' C A 35 83.253 14.643 79.794 1.00 81.53 O
ATOM 6 C5' C A 35 82.296 14.676 78.720 1.00 80.47 C
ATOM 7 C4' C A 35 81.150 15.597 79.066 1.00 79.79 C
ATOM 8 O4' C A 35 80.281 14.980 80.053 1.00 79.71 O
ATOM 9 C3' C A 35 81.519 16.923 79.708 1.00 78.97 C
ATOM 10 O3' C A 35 81.995 17.879 78.773 1.00 78.03 O
ATOM 11 C2' C A 35 80.192 17.337 80.319 1.00 79.29 C
ATOM 12 O2' C A 35 79.291 17.811 79.332 1.00 79.37 O
ATOM 13 C1' C A 35 79.690 15.994 80.856 1.00 79.07 C
ATOM 14 N1 C A 35 80.042 15.760 82.274 1.00 78.60 N
ATOM 15 C2 C A 35 79.309 16.429 83.273 1.00 78.41 C
ATOM 16 O2 C A 35 78.397 17.196 82.942 1.00 78.98 O
ATOM 17 N3 C A 35 79.615 16.220 84.574 1.00 77.88 N
ATOM 18 C4 C A 35 80.599 15.385 84.901 1.00 77.89 C
ATOM 19 N4 C A 35 80.860 15.209 86.201 1.00 76.08 N
ATOM 20 C5 C A 35 81.362 14.692 83.910 1.00 78.12 C
ATOM 21 C6 C A 35 81.054 14.909 82.622 1.00 78.00 C
ATOM 22 P C A 36 83.210 18.847 79.183 1.00 77.58 P
ATOM 23 OP1 C A 36 83.297 19.862 78.109 1.00 78.33 O
ATOM 24 OP2 C A 36 84.406 18.041 79.528 1.00 77.06 O
ATOM 25 O5' C A 36 82.729 19.548 80.534 1.00 78.33 O
TER
ATOM 1 O3' C B 45 76.004 23.426 90.387 1.00 67.14 O
ATOM 2 P A B 46 75.042 22.199 90.024 1.00 68.59 P
ATOM 3 OP1 A B 46 73.948 22.665 89.127 1.00 68.89 O
ATOM 4 OP2 A B 46 74.705 21.513 91.299 1.00 68.22 O
ATOM 5 O5' A B 46 75.975 21.238 89.167 1.00 68.85 O
ATOM 6 C5' A B 46 76.113 21.427 87.748 1.00 67.95 C
ATOM 7 C4' A B 46 76.822 20.249 87.128 1.00 66.59 C
ATOM 8 O4' A B 46 78.119 20.112 87.752 1.00 65.97 O
ATOM 9 C3' A B 46 76.194 18.877 87.315 1.00 65.76 C
ATOM 10 O3' A B 46 75.156 18.634 86.369 1.00 68.52 O
ATOM 11 C2' A B 46 77.383 17.973 87.061 1.00 64.78 C
ATOM 12 O2' A B 46 77.691 17.915 85.687 1.00 65.43 O
ATOM 13 C1' A B 46 78.496 18.749 87.757 1.00 65.38 C
ATOM 14 N9 A B 46 78.692 18.327 89.140 1.00 65.71 N
ATOM 15 C8 A B 46 78.186 18.891 90.283 1.00 65.10 C
ATOM 16 N7 A B 46 78.531 18.262 91.380 1.00 66.01 N
ATOM 17 C5 A B 46 79.317 17.210 90.929 1.00 65.99 C
ATOM 18 C6 A B 46 79.970 16.161 91.600 1.00 65.94 C
ATOM 19 N6 A B 46 79.919 15.984 92.922 1.00 66.23 N
ATOM 20 N1 A B 46 80.676 15.281 90.854 1.00 65.67 N
ATOM 21 C2 A B 46 80.706 15.447 89.525 1.00 65.65 C
ATOM 22 N3 A B 46 80.122 16.381 88.779 1.00 65.58 N
ATOM 23 C4 A B 46 79.433 17.243 89.552 1.00 66.19 C
ATOM 24 P C B 47 74.053 17.494 86.661 1.00 71.18 P
ATOM 25 OP1 C B 47 73.016 17.585 85.597 1.00 69.47 O
ATOM 26 OP2 C B 47 73.656 17.602 88.088 1.00 69.33 O
ATOM 27 O5' C B 47 74.839 16.114 86.481 1.00 72.67 O
TER
ATOM 2 P C A 35 84.541 13.709 79.713 1.00 81.87 P
ATOM 3 OP1 C A 35 85.147 13.825 78.358 1.00 81.64 O
ATOM 4 OP2 C A 35 85.370 14.001 80.918 1.00 79.96 O
ATOM 5 O5' C A 35 83.253 14.643 79.794 1.00 81.53 O
ATOM 6 C5' C A 35 82.296 14.676 78.720 1.00 80.47 C
ATOM 7 C4' C A 35 81.150 15.597 79.066 1.00 79.79 C
ATOM 8 O4' C A 35 80.281 14.980 80.053 1.00 79.71 O
ATOM 9 C3' C A 35 81.519 16.923 79.708 1.00 78.97 C
ATOM 10 O3' C A 35 81.995 17.879 78.773 1.00 78.03 O
ATOM 11 C2' C A 35 80.192 17.337 80.319 1.00 79.29 C
ATOM 12 O2' C A 35 79.291 17.811 79.332 1.00 79.37 O
ATOM 13 C1' C A 35 79.690 15.994 80.856 1.00 79.07 C
ATOM 14 N1 C A 35 80.042 15.760 82.274 1.00 78.60 N
ATOM 15 C2 C A 35 79.309 16.429 83.273 1.00 78.41 C
ATOM 16 O2 C A 35 78.397 17.196 82.942 1.00 78.98 O
ATOM 17 N3 C A 35 79.615 16.220 84.574 1.00 77.88 N
ATOM 18 C4 C A 35 80.599 15.385 84.901 1.00 77.89 C
ATOM 19 N4 C A 35 80.860 15.209 86.201 1.00 76.08 N
ATOM 20 C5 C A 35 81.362 14.692 83.910 1.00 78.12 C
ATOM 21 C6 C A 35 81.054 14.909 82.622 1.00 78.00 C
ATOM 22 P C A 36 83.210 18.847 79.183 1.00 77.58 P
ATOM 23 OP1 C A 36 83.297 19.862 78.109 1.00 78.33 O
ATOM 24 OP2 C A 36 84.406 18.041 79.528 1.00 77.06 O
ATOM 25 O5' C A 36 82.729 19.548 80.534 1.00 78.33 O
TER
ATOM 1 O3' C B 45 76.004 23.426 90.387 1.00 67.14 O
ATOM 2 P A B 46 75.042 22.199 90.024 1.00 68.59 P
ATOM 3 OP1 A B 46 73.948 22.665 89.127 1.00 68.89 O
ATOM 4 OP2 A B 46 74.705 21.513 91.299 1.00 68.22 O
ATOM 5 O5' A B 46 75.975 21.238 89.167 1.00 68.85 O
ATOM 6 C5' A B 46 76.113 21.427 87.748 1.00 67.95 C
ATOM 7 C4' A B 46 76.822 20.249 87.128 1.00 66.59 C
ATOM 8 O4' A B 46 78.119 20.112 87.752 1.00 65.97 O
ATOM 9 C3' A B 46 76.194 18.877 87.315 1.00 65.76 C
ATOM 10 O3' A B 46 75.156 18.634 86.369 1.00 68.52 O
ATOM 11 C2' A B 46 77.383 17.973 87.061 1.00 64.78 C
ATOM 12 O2' A B 46 77.691 17.915 85.687 1.00 65.43 O
ATOM 13 C1' A B 46 78.496 18.749 87.757 1.00 65.38 C
ATOM 14 N9 A B 46 78.692 18.327 89.140 1.00 65.71 N
ATOM 15 C8 A B 46 78.186 18.891 90.283 1.00 65.10 C
ATOM 16 N7 A B 46 78.531 18.262 91.380 1.00 66.01 N
ATOM 17 C5 A B 46 79.317 17.210 90.929 1.00 65.99 C
ATOM 18 C6 A B 46 79.970 16.161 91.600 1.00 65.94 C
ATOM 19 N6 A B 46 79.919 15.984 92.922 1.00 66.23 N
ATOM 20 N1 A B 46 80.676 15.281 90.854 1.00 65.67 N
ATOM 21 C2 A B 46 80.706 15.447 89.525 1.00 65.65 C
ATOM 22 N3 A B 46 80.122 16.381 88.779 1.00 65.58 N
ATOM 23 C4 A B 46 79.433 17.243 89.552 1.00 66.19 C
ATOM 24 P C B 47 74.053 17.494 86.661 1.00 71.18 P
ATOM 25 OP1 C B 47 73.016 17.585 85.597 1.00 69.47 O
ATOM 26 OP2 C B 47 73.656 17.602 88.088 1.00 69.33 O
ATOM 27 O5' C B 47 74.839 16.114 86.481 1.00 72.67 O
TER
Atoms:
C2: (79.309,16.429,83.273)
OP1: (85.147,13.825,78.358)
OP2: (85.370,14.001,80.918)
C4: (80.599,15.385,84.901)
O5': (83.253,14.643,79.794)
C3': (81.519,16.923,79.708)
C1': (79.690,15.994,80.856)
O4': (80.281,14.980,80.053)
C5': (82.296,14.676,78.720)
P: (84.541,13.709,79.713)
O2: (78.397,17.196,82.942)
C4': (81.150,15.597,79.066)
C2': (80.192,17.337,80.319)
O2': (79.291,17.811,79.332)
N1: (80.042,15.760,82.274)
N3: (79.615,16.220,84.574)
N4: (80.860,15.209,86.201)
C6: (81.054,14.909,82.622)
C5: (81.362,14.692,83.910)
O3': (81.995,17.879,78.773)
OP1: (85.147,13.825,78.358)
OP2: (85.370,14.001,80.918)
C4: (80.599,15.385,84.901)
O5': (83.253,14.643,79.794)
C3': (81.519,16.923,79.708)
C1': (79.690,15.994,80.856)
O4': (80.281,14.980,80.053)
C5': (82.296,14.676,78.720)
P: (84.541,13.709,79.713)
O2: (78.397,17.196,82.942)
C4': (81.150,15.597,79.066)
C2': (80.192,17.337,80.319)
O2': (79.291,17.811,79.332)
N1: (80.042,15.760,82.274)
N3: (79.615,16.220,84.574)
N4: (80.860,15.209,86.201)
C6: (81.054,14.909,82.622)
C5: (81.362,14.692,83.910)
O3': (81.995,17.879,78.773)
OP1: (73.948,22.665,89.127)
OP2: (74.705,21.513,91.299)
C3': (76.194,18.877,87.315)
C1': (78.496,18.749,87.757)
C5': (76.113,21.427,87.748)
O4': (78.119,20.112,87.752)
C8: (78.186,18.891,90.283)
O2': (77.691,17.915,85.687)
C6: (79.970,16.161,91.600)
C5: (79.317,17.210,90.929)
C4: (79.433,17.243,89.552)
P: (75.042,22.199,90.024)
C4': (76.822,20.249,87.128)
C2': (77.383,17.973,87.061)
C2: (80.706,15.447,89.525)
N1: (80.676,15.281,90.854)
N3: (80.122,16.381,88.779)
N6: (79.919,15.984,92.922)
N7: (78.531,18.262,91.380)
N9: (78.692,18.327,89.140)
O5': (75.975,21.238,89.167)
O3': (75.156,18.634,86.369)
OP2: (74.705,21.513,91.299)
C3': (76.194,18.877,87.315)
C1': (78.496,18.749,87.757)
C5': (76.113,21.427,87.748)
O4': (78.119,20.112,87.752)
C8: (78.186,18.891,90.283)
O2': (77.691,17.915,85.687)
C6: (79.970,16.161,91.600)
C5: (79.317,17.210,90.929)
C4: (79.433,17.243,89.552)
P: (75.042,22.199,90.024)
C4': (76.822,20.249,87.128)
C2': (77.383,17.973,87.061)
C2: (80.706,15.447,89.525)
N1: (80.676,15.281,90.854)
N3: (80.122,16.381,88.779)
N6: (79.919,15.984,92.922)
N7: (78.531,18.262,91.380)
N9: (78.692,18.327,89.140)
O5': (75.975,21.238,89.167)
O3': (75.156,18.634,86.369)
Image (generated by PyMOL):