ClaRNA

Doublet info:

Details

Nucleotide types: CA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 2J01:B36:B47

Extra

PDB:
ATOM 1 O3' C A 35 -121.119 176.581 136.891 1.00 52.64 O
ATOM 2 P C A 36 -119.602 176.063 136.976 1.00110.01 P
ATOM 3 OP1 C A 36 -118.737 177.243 136.739 1.00 82.46 O
ATOM 4 OP2 C A 36 -119.438 174.856 136.128 1.00 82.53 O
ATOM 5 O5' C A 36 -119.440 175.615 138.494 1.00 31.12 O
ATOM 6 C5' C A 36 -119.339 176.595 139.534 1.00 31.12 C
ATOM 7 C4' C A 36 -118.729 175.990 140.774 1.00 31.12 C
ATOM 8 O4' C A 36 -119.715 175.248 141.532 1.00 31.12 O
ATOM 9 C3' C A 36 -117.587 175.017 140.558 1.00 31.12 C
ATOM 10 O3' C A 36 -116.368 175.711 140.368 1.00 31.12 O
ATOM 11 C2' C A 36 -117.593 174.213 141.853 1.00 31.12 C
ATOM 12 O2' C A 36 -116.920 174.903 142.889 1.00 31.12 O
ATOM 13 C1' C A 36 -119.086 174.164 142.188 1.00 31.12 C
ATOM 14 N1 C A 36 -119.767 172.920 141.784 1.00 27.99 N
ATOM 15 C2 C A 36 -119.728 171.820 142.641 1.00 27.98 C
ATOM 16 O2 C A 36 -119.079 171.899 143.696 1.00 27.92 O
ATOM 17 N3 C A 36 -120.397 170.695 142.300 1.00 28.01 N
ATOM 18 C4 C A 36 -121.082 170.644 141.160 1.00 27.99 C
ATOM 19 N4 C A 36 -121.758 169.530 140.889 1.00 27.99 N
ATOM 20 C5 C A 36 -121.113 171.738 140.254 1.00 27.94 C
ATOM 21 C6 C A 36 -120.447 172.845 140.600 1.00 27.96 C
ATOM 22 P C A 37 -115.336 175.192 139.262 1.00 66.77 P
ATOM 23 OP1 C A 37 -114.135 176.068 139.350 1.00 69.26 O
ATOM 24 OP2 C A 37 -116.057 175.055 137.974 1.00 69.26 O
ATOM 25 O5' C A 37 -114.952 173.734 139.771 1.00 32.11 O
TER

ATOM 1 O3' C B 46 -115.850 164.331 147.876 1.00 24.10 O
ATOM 2 P A B 47 -117.170 164.728 148.707 1.00 78.42 P
ATOM 3 OP1 A B 47 -116.766 165.553 149.870 1.00 29.97 O
ATOM 4 OP2 A B 47 -117.978 163.510 148.937 1.00 29.96 O
ATOM 5 O5' A B 47 -117.930 165.667 147.673 1.00 36.91 O
ATOM 6 C5' A B 47 -117.222 166.758 147.073 1.00 36.91 C
ATOM 7 C4' A B 47 -118.025 167.392 145.965 1.00 36.91 C
ATOM 8 O4' A B 47 -118.059 166.550 144.786 1.00 36.91 O
ATOM 9 C3' A B 47 -119.482 167.714 146.216 1.00 36.91 C
ATOM 10 O3' A B 47 -119.649 168.886 146.988 1.00 36.91 O
ATOM 11 C2' A B 47 -120.002 167.919 144.802 1.00 36.91 C
ATOM 12 O2' A B 47 -119.686 169.213 144.332 1.00 36.91 O
ATOM 13 C1' A B 47 -119.196 166.883 144.013 1.00 36.91 C
ATOM 14 N9 A B 47 -119.971 165.673 143.751 1.00 30.79 N
ATOM 15 C8 A B 47 -119.904 164.451 144.367 1.00 30.75 C
ATOM 16 N7 A B 47 -120.782 163.587 143.918 1.00 30.72 N
ATOM 17 C5 A B 47 -121.465 164.289 142.934 1.00 30.76 C
ATOM 18 C6 A B 47 -122.529 163.939 142.089 1.00 30.80 C
ATOM 19 N6 A B 47 -123.120 162.743 142.100 1.00 30.84 N
ATOM 20 N1 A B 47 -122.975 164.871 141.224 1.00 30.77 N
ATOM 21 C2 A B 47 -122.390 166.066 141.220 1.00 30.75 C
ATOM 22 N3 A B 47 -121.390 166.515 141.966 1.00 30.78 N
ATOM 23 C4 A B 47 -120.968 165.566 142.813 1.00 30.76 C
ATOM 24 P C B 48 -120.892 168.989 147.992 1.00 54.98 P
ATOM 25 OP1 C B 48 -120.467 169.846 149.128 1.00 22.32 O
ATOM 26 OP2 C B 48 -121.394 167.622 148.258 1.00 22.24 O
ATOM 27 O5' C B 48 -122.005 169.726 147.131 1.00 21.26 O
TER

Atoms:
C2: (-119.728,171.820,142.641)
OP1: (-118.737,177.243,136.739)
OP2: (-119.438,174.856,136.128)
C4: (-121.082,170.644,141.160)
O5': (-119.440,175.615,138.494)
C3': (-117.587,175.017,140.558)
C1': (-119.086,174.164,142.188)
O4': (-119.715,175.248,141.532)
C5': (-119.339,176.595,139.534)
P: (-119.602,176.063,136.976)
O2: (-119.079,171.899,143.696)
C4': (-118.729,175.990,140.774)
C2': (-117.593,174.213,141.853)
O2': (-116.920,174.903,142.889)
N1: (-119.767,172.920,141.784)
N3: (-120.397,170.695,142.300)
N4: (-121.758,169.530,140.889)
C6: (-120.447,172.845,140.600)
C5: (-121.113,171.738,140.254)
O3': (-116.368,175.711,140.368)
OP1: (-116.766,165.553,149.870)
OP2: (-117.978,163.510,148.937)
C3': (-119.482,167.714,146.216)
C1': (-119.196,166.883,144.013)
C5': (-117.222,166.758,147.073)
O4': (-118.059,166.550,144.786)
C8: (-119.904,164.451,144.367)
O2': (-119.686,169.213,144.332)
C6: (-122.529,163.939,142.089)
C5: (-121.465,164.289,142.934)
C4: (-120.968,165.566,142.813)
P: (-117.170,164.728,148.707)
C4': (-118.025,167.392,145.965)
C2': (-120.002,167.919,144.802)
C2: (-122.390,166.066,141.220)
N1: (-122.975,164.871,141.224)
N3: (-121.390,166.515,141.966)
N6: (-123.120,162.743,142.100)
N7: (-120.782,163.587,143.918)
N9: (-119.971,165.673,143.751)
O5': (-117.930,165.667,147.673)
O3': (-119.649,168.886,146.988)
Image (generated by PyMOL):
PyMOL image
show in jmol