ClaRNA

Doublet info:

Details

Nucleotide types: CA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 2J02:A1360:A907

Extra

PDB:
ATOM 1 O3' C A1359 -110.461 37.057 12.670 1.00 41.59 O
ATOM 2 P C A1360 -110.696 37.307 11.105 1.00 76.20 P
ATOM 3 OP1 C A1360 -109.835 36.355 10.374 1.00 76.35 O
ATOM 4 OP2 C A1360 -110.567 38.766 10.842 1.00 74.45 O
ATOM 5 O5' C A1360 -112.216 36.891 10.882 1.00 44.16 O
ATOM 6 C5' C A1360 -112.625 35.528 11.043 1.00 41.85 C
ATOM 7 C4' C A1360 -114.021 35.336 10.508 1.00 40.42 C
ATOM 8 O4' C A1360 -114.965 35.969 11.404 1.00 39.05 O
ATOM 9 C3' C A1360 -114.292 35.964 9.148 1.00 40.62 C
ATOM 10 O3' C A1360 -113.893 35.131 8.066 1.00 42.04 O
ATOM 11 C2' C A1360 -115.797 36.202 9.181 1.00 40.01 C
ATOM 12 O2' C A1360 -116.572 35.074 8.822 1.00 38.81 O
ATOM 13 C1' C A1360 -116.019 36.555 10.655 1.00 38.86 C
ATOM 14 N1 C A1360 -115.995 38.017 10.876 1.00 78.29 N
ATOM 15 C2 C A1360 -117.165 38.766 10.637 1.00 76.53 C
ATOM 16 O2 C A1360 -118.204 38.180 10.274 1.00 75.47 O
ATOM 17 N3 C A1360 -117.133 40.106 10.807 1.00 76.15 N
ATOM 18 C4 C A1360 -116.007 40.703 11.204 1.00 76.49 C
ATOM 19 N4 C A1360 -116.027 42.030 11.358 1.00 75.88 N
ATOM 20 C5 C A1360 -114.811 39.968 11.464 1.00 76.91 C
ATOM 21 C6 C A1360 -114.850 38.643 11.291 1.00 78.11 C
ATOM 22 P C A1361 -113.396 35.799 6.687 1.00109.26 P
ATOM 23 OP1 C A1361 -113.074 34.686 5.756 1.00 90.68 O
ATOM 24 OP2 C A1361 -112.355 36.813 7.010 1.00 88.04 O
ATOM 25 O5' C A1361 -114.690 36.549 6.135 1.00107.31 O
TER

ATOM 1 O3' C B 906 -124.912 45.334 8.612 1.00 99.56 O
ATOM 2 P A B 907 -124.416 44.670 7.245 1.00102.41 P
ATOM 3 OP1 A B 907 -124.173 45.756 6.260 1.00 89.38 O
ATOM 4 OP2 A B 907 -125.360 43.562 6.914 1.00 87.78 O
ATOM 5 O5' A B 907 -122.998 44.070 7.655 1.00 50.25 O
ATOM 6 C5' A B 907 -122.476 42.893 7.020 1.00 47.15 C
ATOM 7 C4' A B 907 -121.300 42.348 7.801 1.00 45.22 C
ATOM 8 O4' A B 907 -120.205 43.295 7.764 1.00 45.77 O
ATOM 9 C3' A B 907 -121.533 42.093 9.278 1.00 45.40 C
ATOM 10 O3' A B 907 -122.126 40.826 9.485 1.00 45.80 O
ATOM 11 C2' A B 907 -120.125 42.161 9.849 1.00 43.83 C
ATOM 12 O2' A B 907 -119.415 40.956 9.644 1.00 44.46 O
ATOM 13 C1' A B 907 -119.496 43.251 8.984 1.00 42.50 C
ATOM 14 N9 A B 907 -119.596 44.568 9.597 1.00 69.25 N
ATOM 15 C8 A B 907 -120.479 45.573 9.292 1.00 68.25 C
ATOM 16 N7 A B 907 -120.328 46.648 10.025 1.00 67.76 N
ATOM 17 C5 A B 907 -119.273 46.329 10.867 1.00 65.04 C
ATOM 18 C6 A B 907 -118.627 47.048 11.886 1.00 63.61 C
ATOM 19 N6 A B 907 -118.964 48.288 12.250 1.00 63.59 N
ATOM 20 N1 A B 907 -117.609 46.440 12.531 1.00 64.86 N
ATOM 21 C2 A B 907 -117.279 45.191 12.175 1.00 66.65 C
ATOM 22 N3 A B 907 -117.813 44.412 11.240 1.00 68.83 N
ATOM 23 C4 A B 907 -118.814 45.050 10.614 1.00 67.73 C
ATOM 24 P C B 908 -122.933 40.549 10.841 1.00 74.36 P
ATOM 25 OP1 C B 908 -123.409 39.139 10.799 1.00 85.61 O
ATOM 26 OP2 C B 908 -123.913 41.650 11.039 1.00 89.11 O
ATOM 27 O5' C B 908 -121.802 40.671 11.960 1.00 34.16 O
TER

Atoms:
C2: (-117.165,38.766,10.637)
OP1: (-109.835,36.355,10.374)
OP2: (-110.567,38.766,10.842)
C4: (-116.007,40.703,11.204)
O5': (-112.216,36.891,10.882)
C3': (-114.292,35.964,9.148)
C1': (-116.019,36.555,10.655)
O4': (-114.965,35.969,11.404)
C5': (-112.625,35.528,11.043)
P: (-110.696,37.307,11.105)
O2: (-118.204,38.180,10.274)
C4': (-114.021,35.336,10.508)
C2': (-115.797,36.202,9.181)
O2': (-116.572,35.074,8.822)
N1: (-115.995,38.017,10.876)
N3: (-117.133,40.106,10.807)
N4: (-116.027,42.030,11.358)
C6: (-114.850,38.643,11.291)
C5: (-114.811,39.968,11.464)
O3': (-113.893,35.131,8.066)
OP1: (-124.173,45.756,6.260)
OP2: (-125.360,43.562,6.914)
C3': (-121.533,42.093,9.278)
C1': (-119.496,43.251,8.984)
C5': (-122.476,42.893,7.020)
O4': (-120.205,43.295,7.764)
C8: (-120.479,45.573,9.292)
O2': (-119.415,40.956,9.644)
C6: (-118.627,47.048,11.886)
C5: (-119.273,46.329,10.867)
C4: (-118.814,45.050,10.614)
P: (-124.416,44.670,7.245)
C4': (-121.300,42.348,7.801)
C2': (-120.125,42.161,9.849)
C2: (-117.279,45.191,12.175)
N1: (-117.609,46.440,12.531)
N3: (-117.813,44.412,11.240)
N6: (-118.964,48.288,12.250)
N7: (-120.328,46.648,10.025)
N9: (-119.596,44.568,9.597)
O5': (-122.998,44.070,7.655)
O3': (-122.126,40.826,9.485)
Image (generated by PyMOL):
PyMOL image
show in jmol