Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8O:A562:A298
Extra
PDB:
ATOM 1 O3' A A 561 -15.197 73.531 77.686 1.00 18.11 O
ATOM 2 P C A 562 -13.855 74.264 78.184 1.00 18.49 P
ATOM 3 OP1 C A 562 -13.929 74.352 79.663 1.00 18.49 O
ATOM 4 OP2 C A 562 -13.719 75.515 77.404 1.00 18.49 O
ATOM 5 O5' C A 562 -12.721 73.221 77.752 1.00 18.49 O
ATOM 6 C5' C A 562 -11.347 73.567 77.788 1.00 18.49 C
ATOM 7 C4' C A 562 -10.461 72.384 77.454 1.00 18.49 C
ATOM 8 O4' C A 562 -10.446 71.442 78.562 1.00 18.49 O
ATOM 9 C3' C A 562 -10.880 71.525 76.262 1.00 18.49 C
ATOM 10 O3' C A 562 -10.552 72.088 75.024 1.00 18.49 O
ATOM 11 C2' C A 562 -10.171 70.219 76.534 1.00 18.49 C
ATOM 12 O2' C A 562 -8.790 70.327 76.237 1.00 18.49 O
ATOM 13 C1' C A 562 -10.345 70.114 78.051 1.00 18.49 C
ATOM 14 N1 C A 562 -11.582 69.369 78.407 1.00 18.73 N
ATOM 15 C2 C A 562 -11.757 68.081 77.894 1.00 18.73 C
ATOM 16 O2 C A 562 -10.871 67.596 77.175 1.00 18.73 O
ATOM 17 N3 C A 562 -12.877 67.386 78.184 1.00 18.73 N
ATOM 18 C4 C A 562 -13.810 67.938 78.954 1.00 18.73 C
ATOM 19 N4 C A 562 -14.907 67.223 79.233 1.00 18.73 N
ATOM 20 C5 C A 562 -13.664 69.256 79.474 1.00 18.73 C
ATOM 21 C6 C A 562 -12.549 69.928 79.180 1.00 18.73 C
ATOM 22 P U A 563 -11.725 72.648 74.111 1.00 19.80 P
ATOM 23 OP1 U A 563 -11.175 73.777 73.319 1.00 19.80 O
ATOM 24 OP2 U A 563 -12.870 72.902 75.014 1.00 19.80 O
ATOM 25 O5' U A 563 -12.052 71.421 73.161 1.00 19.80 O
TER
ATOM 1 O3' G B 297 -14.048 58.514 76.167 1.00 19.48 O
ATOM 2 P A B 298 -13.494 58.286 77.666 1.00 21.64 P
ATOM 3 OP1 A B 298 -12.339 57.377 77.559 1.00 21.64 O
ATOM 4 OP2 A B 298 -14.642 57.876 78.517 1.00 21.64 O
ATOM 5 O5' A B 298 -12.985 59.736 78.071 1.00 21.64 O
ATOM 6 C5' A B 298 -12.172 60.489 77.181 1.00 21.64 C
ATOM 7 C4' A B 298 -12.313 61.972 77.425 1.00 21.64 C
ATOM 8 O4' A B 298 -13.434 62.502 76.668 1.00 21.64 O
ATOM 9 C3' A B 298 -12.609 62.375 78.856 1.00 21.64 C
ATOM 10 O3' A B 298 -11.455 62.398 79.663 1.00 21.64 O
ATOM 11 C2' A B 298 -13.264 63.731 78.683 1.00 21.64 C
ATOM 12 O2' A B 298 -12.293 64.725 78.418 1.00 21.64 O
ATOM 13 C1' A B 298 -14.093 63.496 77.421 1.00 21.64 C
ATOM 14 N9 A B 298 -15.427 62.991 77.747 1.00 21.55 N
ATOM 15 C8 A B 298 -15.668 61.673 77.967 1.00 21.55 C
ATOM 16 N7 A B 298 -16.905 61.415 78.263 1.00 21.55 N
ATOM 17 C5 A B 298 -17.527 62.661 78.245 1.00 21.55 C
ATOM 18 C6 A B 298 -18.862 63.044 78.477 1.00 21.55 C
ATOM 19 N6 A B 298 -19.827 62.174 78.777 1.00 21.55 N
ATOM 20 N1 A B 298 -19.168 64.342 78.380 1.00 21.55 N
ATOM 21 C2 A B 298 -18.180 65.174 78.064 1.00 21.55 C
ATOM 22 N3 A B 298 -16.894 64.932 77.815 1.00 21.55 N
ATOM 23 C4 A B 298 -16.620 63.640 77.922 1.00 21.55 C
ATOM 24 P G B 299 -11.591 62.484 81.248 1.00 21.65 P
ATOM 25 OP1 G B 299 -10.239 62.739 81.776 1.00 21.65 O
ATOM 26 OP2 G B 299 -12.324 61.272 81.699 1.00 21.65 O
ATOM 27 O5' G B 299 -12.497 63.776 81.431 1.00 21.65 O
TER
ATOM 2 P C A 562 -13.855 74.264 78.184 1.00 18.49 P
ATOM 3 OP1 C A 562 -13.929 74.352 79.663 1.00 18.49 O
ATOM 4 OP2 C A 562 -13.719 75.515 77.404 1.00 18.49 O
ATOM 5 O5' C A 562 -12.721 73.221 77.752 1.00 18.49 O
ATOM 6 C5' C A 562 -11.347 73.567 77.788 1.00 18.49 C
ATOM 7 C4' C A 562 -10.461 72.384 77.454 1.00 18.49 C
ATOM 8 O4' C A 562 -10.446 71.442 78.562 1.00 18.49 O
ATOM 9 C3' C A 562 -10.880 71.525 76.262 1.00 18.49 C
ATOM 10 O3' C A 562 -10.552 72.088 75.024 1.00 18.49 O
ATOM 11 C2' C A 562 -10.171 70.219 76.534 1.00 18.49 C
ATOM 12 O2' C A 562 -8.790 70.327 76.237 1.00 18.49 O
ATOM 13 C1' C A 562 -10.345 70.114 78.051 1.00 18.49 C
ATOM 14 N1 C A 562 -11.582 69.369 78.407 1.00 18.73 N
ATOM 15 C2 C A 562 -11.757 68.081 77.894 1.00 18.73 C
ATOM 16 O2 C A 562 -10.871 67.596 77.175 1.00 18.73 O
ATOM 17 N3 C A 562 -12.877 67.386 78.184 1.00 18.73 N
ATOM 18 C4 C A 562 -13.810 67.938 78.954 1.00 18.73 C
ATOM 19 N4 C A 562 -14.907 67.223 79.233 1.00 18.73 N
ATOM 20 C5 C A 562 -13.664 69.256 79.474 1.00 18.73 C
ATOM 21 C6 C A 562 -12.549 69.928 79.180 1.00 18.73 C
ATOM 22 P U A 563 -11.725 72.648 74.111 1.00 19.80 P
ATOM 23 OP1 U A 563 -11.175 73.777 73.319 1.00 19.80 O
ATOM 24 OP2 U A 563 -12.870 72.902 75.014 1.00 19.80 O
ATOM 25 O5' U A 563 -12.052 71.421 73.161 1.00 19.80 O
TER
ATOM 1 O3' G B 297 -14.048 58.514 76.167 1.00 19.48 O
ATOM 2 P A B 298 -13.494 58.286 77.666 1.00 21.64 P
ATOM 3 OP1 A B 298 -12.339 57.377 77.559 1.00 21.64 O
ATOM 4 OP2 A B 298 -14.642 57.876 78.517 1.00 21.64 O
ATOM 5 O5' A B 298 -12.985 59.736 78.071 1.00 21.64 O
ATOM 6 C5' A B 298 -12.172 60.489 77.181 1.00 21.64 C
ATOM 7 C4' A B 298 -12.313 61.972 77.425 1.00 21.64 C
ATOM 8 O4' A B 298 -13.434 62.502 76.668 1.00 21.64 O
ATOM 9 C3' A B 298 -12.609 62.375 78.856 1.00 21.64 C
ATOM 10 O3' A B 298 -11.455 62.398 79.663 1.00 21.64 O
ATOM 11 C2' A B 298 -13.264 63.731 78.683 1.00 21.64 C
ATOM 12 O2' A B 298 -12.293 64.725 78.418 1.00 21.64 O
ATOM 13 C1' A B 298 -14.093 63.496 77.421 1.00 21.64 C
ATOM 14 N9 A B 298 -15.427 62.991 77.747 1.00 21.55 N
ATOM 15 C8 A B 298 -15.668 61.673 77.967 1.00 21.55 C
ATOM 16 N7 A B 298 -16.905 61.415 78.263 1.00 21.55 N
ATOM 17 C5 A B 298 -17.527 62.661 78.245 1.00 21.55 C
ATOM 18 C6 A B 298 -18.862 63.044 78.477 1.00 21.55 C
ATOM 19 N6 A B 298 -19.827 62.174 78.777 1.00 21.55 N
ATOM 20 N1 A B 298 -19.168 64.342 78.380 1.00 21.55 N
ATOM 21 C2 A B 298 -18.180 65.174 78.064 1.00 21.55 C
ATOM 22 N3 A B 298 -16.894 64.932 77.815 1.00 21.55 N
ATOM 23 C4 A B 298 -16.620 63.640 77.922 1.00 21.55 C
ATOM 24 P G B 299 -11.591 62.484 81.248 1.00 21.65 P
ATOM 25 OP1 G B 299 -10.239 62.739 81.776 1.00 21.65 O
ATOM 26 OP2 G B 299 -12.324 61.272 81.699 1.00 21.65 O
ATOM 27 O5' G B 299 -12.497 63.776 81.431 1.00 21.65 O
TER
Atoms:
C2: (-11.757,68.081,77.894)
OP1: (-13.929,74.352,79.663)
OP2: (-13.719,75.515,77.404)
C4: (-13.810,67.938,78.954)
O5': (-12.721,73.221,77.752)
C3': (-10.880,71.525,76.262)
C1': (-10.345,70.114,78.051)
O4': (-10.446,71.442,78.562)
C5': (-11.347,73.567,77.788)
P: (-13.855,74.264,78.184)
O2: (-10.871,67.596,77.175)
C4': (-10.461,72.384,77.454)
C2': (-10.171,70.219,76.534)
O2': (-8.790,70.327,76.237)
N1: (-11.582,69.369,78.407)
N3: (-12.877,67.386,78.184)
N4: (-14.907,67.223,79.233)
C6: (-12.549,69.928,79.180)
C5: (-13.664,69.256,79.474)
O3': (-10.552,72.088,75.024)
OP1: (-13.929,74.352,79.663)
OP2: (-13.719,75.515,77.404)
C4: (-13.810,67.938,78.954)
O5': (-12.721,73.221,77.752)
C3': (-10.880,71.525,76.262)
C1': (-10.345,70.114,78.051)
O4': (-10.446,71.442,78.562)
C5': (-11.347,73.567,77.788)
P: (-13.855,74.264,78.184)
O2: (-10.871,67.596,77.175)
C4': (-10.461,72.384,77.454)
C2': (-10.171,70.219,76.534)
O2': (-8.790,70.327,76.237)
N1: (-11.582,69.369,78.407)
N3: (-12.877,67.386,78.184)
N4: (-14.907,67.223,79.233)
C6: (-12.549,69.928,79.180)
C5: (-13.664,69.256,79.474)
O3': (-10.552,72.088,75.024)
OP1: (-12.339,57.377,77.559)
OP2: (-14.642,57.876,78.517)
C3': (-12.609,62.375,78.856)
C1': (-14.093,63.496,77.421)
C5': (-12.172,60.489,77.181)
O4': (-13.434,62.502,76.668)
C8: (-15.668,61.673,77.967)
O2': (-12.293,64.725,78.418)
C6: (-18.862,63.044,78.477)
C5: (-17.527,62.661,78.245)
C4: (-16.620,63.640,77.922)
P: (-13.494,58.286,77.666)
C4': (-12.313,61.972,77.425)
C2': (-13.264,63.731,78.683)
C2: (-18.180,65.174,78.064)
N1: (-19.168,64.342,78.380)
N3: (-16.894,64.932,77.815)
N6: (-19.827,62.174,78.777)
N7: (-16.905,61.415,78.263)
N9: (-15.427,62.991,77.747)
O5': (-12.985,59.736,78.071)
O3': (-11.455,62.398,79.663)
OP2: (-14.642,57.876,78.517)
C3': (-12.609,62.375,78.856)
C1': (-14.093,63.496,77.421)
C5': (-12.172,60.489,77.181)
O4': (-13.434,62.502,76.668)
C8: (-15.668,61.673,77.967)
O2': (-12.293,64.725,78.418)
C6: (-18.862,63.044,78.477)
C5: (-17.527,62.661,78.245)
C4: (-16.620,63.640,77.922)
P: (-13.494,58.286,77.666)
C4': (-12.313,61.972,77.425)
C2': (-13.264,63.731,78.683)
C2: (-18.180,65.174,78.064)
N1: (-19.168,64.342,78.380)
N3: (-16.894,64.932,77.815)
N6: (-19.827,62.174,78.777)
N7: (-16.905,61.415,78.263)
N9: (-15.427,62.991,77.747)
O5': (-12.985,59.736,78.071)
O3': (-11.455,62.398,79.663)
Image (generated by PyMOL):