Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8O:A1381:A933
Extra
PDB:
ATOM 1 O3' C A1380 -56.252 122.589 65.823 1.00 41.29 O
ATOM 2 P C A1381 -56.149 121.022 65.522 1.00 30.88 P
ATOM 3 OP1 C A1381 -55.090 120.479 66.413 1.00 30.88 O
ATOM 4 OP2 C A1381 -55.993 120.873 64.033 1.00 30.88 O
ATOM 5 O5' C A1381 -57.578 120.477 65.986 1.00 30.88 O
ATOM 6 C5' C A1381 -58.197 120.948 67.171 1.00 30.88 C
ATOM 7 C4' C A1381 -59.698 120.848 67.080 1.00 30.88 C
ATOM 8 O4' C A1381 -60.210 121.903 66.229 1.00 30.88 O
ATOM 9 C3' C A1381 -60.238 119.572 66.452 1.00 30.88 C
ATOM 10 O3' C A1381 -60.280 118.494 67.357 1.00 30.88 O
ATOM 11 C2' C A1381 -61.608 119.997 65.945 1.00 30.88 C
ATOM 12 O2' C A1381 -62.561 120.024 66.997 1.00 30.88 O
ATOM 13 C1' C A1381 -61.324 121.429 65.490 1.00 30.88 C
ATOM 14 N1 C A1381 -60.995 121.482 64.045 1.00 30.60 N
ATOM 15 C2 C A1381 -62.069 121.423 63.157 1.00 30.60 C
ATOM 16 O2 C A1381 -63.214 121.359 63.644 1.00 30.60 O
ATOM 17 N3 C A1381 -61.821 121.444 61.821 1.00 30.60 N
ATOM 18 C4 C A1381 -60.557 121.511 61.381 1.00 30.60 C
ATOM 19 N4 C A1381 -60.340 121.535 60.063 1.00 30.60 N
ATOM 20 C5 C A1381 -59.445 121.563 62.271 1.00 30.60 C
ATOM 21 C6 C A1381 -59.706 121.542 63.582 1.00 30.60 C
ATOM 22 P C A1382 -59.550 117.115 67.000 1.00 42.75 P
ATOM 23 OP1 C A1382 -59.032 116.550 68.274 1.00 42.75 O
ATOM 24 OP2 C A1382 -58.595 117.400 65.899 1.00 42.75 O
ATOM 25 O5' C A1382 -60.754 116.227 66.465 1.00 42.75 O
TER
ATOM 1 O3' C B 932 -69.383 118.983 56.152 1.00 47.45 O
ATOM 2 P A B 933 -69.056 117.534 56.756 1.00 45.05 P
ATOM 3 OP1 A B 933 -68.549 116.685 55.633 1.00 45.05 O
ATOM 4 OP2 A B 933 -70.258 117.100 57.501 1.00 45.05 O
ATOM 5 O5' A B 933 -67.878 117.835 57.773 1.00 45.05 O
ATOM 6 C5' A B 933 -68.127 118.456 59.026 1.00 45.05 C
ATOM 7 C4' A B 933 -66.835 118.796 59.720 1.00 45.05 C
ATOM 8 O4' A B 933 -65.738 118.193 58.997 1.00 45.05 O
ATOM 9 C3' A B 933 -66.500 120.271 59.785 1.00 45.05 C
ATOM 10 O3' A B 933 -67.053 120.883 60.926 1.00 45.05 O
ATOM 11 C2' A B 933 -64.972 120.307 59.746 1.00 45.05 C
ATOM 12 O2' A B 933 -64.416 120.147 61.039 1.00 45.05 O
ATOM 13 C1' A B 933 -64.642 119.062 58.936 1.00 45.05 C
ATOM 14 N9 A B 933 -64.373 119.358 57.528 1.00 45.19 N
ATOM 15 C8 A B 933 -64.830 118.683 56.426 1.00 45.19 C
ATOM 16 N7 A B 933 -64.393 119.173 55.295 1.00 45.19 N
ATOM 17 C5 A B 933 -63.590 120.234 55.696 1.00 45.19 C
ATOM 18 C6 A B 933 -62.823 121.168 54.977 1.00 45.19 C
ATOM 19 N6 A B 933 -62.728 121.208 53.639 1.00 45.19 N
ATOM 20 N1 A B 933 -62.151 122.081 55.714 1.00 45.19 N
ATOM 21 C2 A B 933 -62.235 122.057 57.056 1.00 45.19 C
ATOM 22 N3 A B 933 -62.921 121.236 57.841 1.00 45.19 N
ATOM 23 C4 A B 933 -63.572 120.349 57.077 1.00 45.19 C
ATOM 24 P C B 934 -67.852 122.257 60.785 1.00 40.51 P
ATOM 25 OP1 C B 934 -68.745 122.381 61.965 1.00 40.51 O
ATOM 26 OP2 C B 934 -68.454 122.268 59.432 1.00 40.51 O
ATOM 27 O5' C B 934 -66.689 123.328 60.870 1.00 40.51 O
TER
ATOM 2 P C A1381 -56.149 121.022 65.522 1.00 30.88 P
ATOM 3 OP1 C A1381 -55.090 120.479 66.413 1.00 30.88 O
ATOM 4 OP2 C A1381 -55.993 120.873 64.033 1.00 30.88 O
ATOM 5 O5' C A1381 -57.578 120.477 65.986 1.00 30.88 O
ATOM 6 C5' C A1381 -58.197 120.948 67.171 1.00 30.88 C
ATOM 7 C4' C A1381 -59.698 120.848 67.080 1.00 30.88 C
ATOM 8 O4' C A1381 -60.210 121.903 66.229 1.00 30.88 O
ATOM 9 C3' C A1381 -60.238 119.572 66.452 1.00 30.88 C
ATOM 10 O3' C A1381 -60.280 118.494 67.357 1.00 30.88 O
ATOM 11 C2' C A1381 -61.608 119.997 65.945 1.00 30.88 C
ATOM 12 O2' C A1381 -62.561 120.024 66.997 1.00 30.88 O
ATOM 13 C1' C A1381 -61.324 121.429 65.490 1.00 30.88 C
ATOM 14 N1 C A1381 -60.995 121.482 64.045 1.00 30.60 N
ATOM 15 C2 C A1381 -62.069 121.423 63.157 1.00 30.60 C
ATOM 16 O2 C A1381 -63.214 121.359 63.644 1.00 30.60 O
ATOM 17 N3 C A1381 -61.821 121.444 61.821 1.00 30.60 N
ATOM 18 C4 C A1381 -60.557 121.511 61.381 1.00 30.60 C
ATOM 19 N4 C A1381 -60.340 121.535 60.063 1.00 30.60 N
ATOM 20 C5 C A1381 -59.445 121.563 62.271 1.00 30.60 C
ATOM 21 C6 C A1381 -59.706 121.542 63.582 1.00 30.60 C
ATOM 22 P C A1382 -59.550 117.115 67.000 1.00 42.75 P
ATOM 23 OP1 C A1382 -59.032 116.550 68.274 1.00 42.75 O
ATOM 24 OP2 C A1382 -58.595 117.400 65.899 1.00 42.75 O
ATOM 25 O5' C A1382 -60.754 116.227 66.465 1.00 42.75 O
TER
ATOM 1 O3' C B 932 -69.383 118.983 56.152 1.00 47.45 O
ATOM 2 P A B 933 -69.056 117.534 56.756 1.00 45.05 P
ATOM 3 OP1 A B 933 -68.549 116.685 55.633 1.00 45.05 O
ATOM 4 OP2 A B 933 -70.258 117.100 57.501 1.00 45.05 O
ATOM 5 O5' A B 933 -67.878 117.835 57.773 1.00 45.05 O
ATOM 6 C5' A B 933 -68.127 118.456 59.026 1.00 45.05 C
ATOM 7 C4' A B 933 -66.835 118.796 59.720 1.00 45.05 C
ATOM 8 O4' A B 933 -65.738 118.193 58.997 1.00 45.05 O
ATOM 9 C3' A B 933 -66.500 120.271 59.785 1.00 45.05 C
ATOM 10 O3' A B 933 -67.053 120.883 60.926 1.00 45.05 O
ATOM 11 C2' A B 933 -64.972 120.307 59.746 1.00 45.05 C
ATOM 12 O2' A B 933 -64.416 120.147 61.039 1.00 45.05 O
ATOM 13 C1' A B 933 -64.642 119.062 58.936 1.00 45.05 C
ATOM 14 N9 A B 933 -64.373 119.358 57.528 1.00 45.19 N
ATOM 15 C8 A B 933 -64.830 118.683 56.426 1.00 45.19 C
ATOM 16 N7 A B 933 -64.393 119.173 55.295 1.00 45.19 N
ATOM 17 C5 A B 933 -63.590 120.234 55.696 1.00 45.19 C
ATOM 18 C6 A B 933 -62.823 121.168 54.977 1.00 45.19 C
ATOM 19 N6 A B 933 -62.728 121.208 53.639 1.00 45.19 N
ATOM 20 N1 A B 933 -62.151 122.081 55.714 1.00 45.19 N
ATOM 21 C2 A B 933 -62.235 122.057 57.056 1.00 45.19 C
ATOM 22 N3 A B 933 -62.921 121.236 57.841 1.00 45.19 N
ATOM 23 C4 A B 933 -63.572 120.349 57.077 1.00 45.19 C
ATOM 24 P C B 934 -67.852 122.257 60.785 1.00 40.51 P
ATOM 25 OP1 C B 934 -68.745 122.381 61.965 1.00 40.51 O
ATOM 26 OP2 C B 934 -68.454 122.268 59.432 1.00 40.51 O
ATOM 27 O5' C B 934 -66.689 123.328 60.870 1.00 40.51 O
TER
Atoms:
C2: (-62.069,121.423,63.157)
OP1: (-55.090,120.479,66.413)
OP2: (-55.993,120.873,64.033)
C4: (-60.557,121.511,61.381)
O5': (-57.578,120.477,65.986)
C3': (-60.238,119.572,66.452)
C1': (-61.324,121.429,65.490)
O4': (-60.210,121.903,66.229)
C5': (-58.197,120.948,67.171)
P: (-56.149,121.022,65.522)
O2: (-63.214,121.359,63.644)
C4': (-59.698,120.848,67.080)
C2': (-61.608,119.997,65.945)
O2': (-62.561,120.024,66.997)
N1: (-60.995,121.482,64.045)
N3: (-61.821,121.444,61.821)
N4: (-60.340,121.535,60.063)
C6: (-59.706,121.542,63.582)
C5: (-59.445,121.563,62.271)
O3': (-60.280,118.494,67.357)
OP1: (-55.090,120.479,66.413)
OP2: (-55.993,120.873,64.033)
C4: (-60.557,121.511,61.381)
O5': (-57.578,120.477,65.986)
C3': (-60.238,119.572,66.452)
C1': (-61.324,121.429,65.490)
O4': (-60.210,121.903,66.229)
C5': (-58.197,120.948,67.171)
P: (-56.149,121.022,65.522)
O2: (-63.214,121.359,63.644)
C4': (-59.698,120.848,67.080)
C2': (-61.608,119.997,65.945)
O2': (-62.561,120.024,66.997)
N1: (-60.995,121.482,64.045)
N3: (-61.821,121.444,61.821)
N4: (-60.340,121.535,60.063)
C6: (-59.706,121.542,63.582)
C5: (-59.445,121.563,62.271)
O3': (-60.280,118.494,67.357)
OP1: (-68.549,116.685,55.633)
OP2: (-70.258,117.100,57.501)
C3': (-66.500,120.271,59.785)
C1': (-64.642,119.062,58.936)
C5': (-68.127,118.456,59.026)
O4': (-65.738,118.193,58.997)
C8: (-64.830,118.683,56.426)
O2': (-64.416,120.147,61.039)
C6: (-62.823,121.168,54.977)
C5: (-63.590,120.234,55.696)
C4: (-63.572,120.349,57.077)
P: (-69.056,117.534,56.756)
C4': (-66.835,118.796,59.720)
C2': (-64.972,120.307,59.746)
C2: (-62.235,122.057,57.056)
N1: (-62.151,122.081,55.714)
N3: (-62.921,121.236,57.841)
N6: (-62.728,121.208,53.639)
N7: (-64.393,119.173,55.295)
N9: (-64.373,119.358,57.528)
O5': (-67.878,117.835,57.773)
O3': (-67.053,120.883,60.926)
OP2: (-70.258,117.100,57.501)
C3': (-66.500,120.271,59.785)
C1': (-64.642,119.062,58.936)
C5': (-68.127,118.456,59.026)
O4': (-65.738,118.193,58.997)
C8: (-64.830,118.683,56.426)
O2': (-64.416,120.147,61.039)
C6: (-62.823,121.168,54.977)
C5: (-63.590,120.234,55.696)
C4: (-63.572,120.349,57.077)
P: (-69.056,117.534,56.756)
C4': (-66.835,118.796,59.720)
C2': (-64.972,120.307,59.746)
C2: (-62.235,122.057,57.056)
N1: (-62.151,122.081,55.714)
N3: (-62.921,121.236,57.841)
N6: (-62.728,121.208,53.639)
N7: (-64.393,119.173,55.295)
N9: (-64.373,119.358,57.528)
O5': (-67.878,117.835,57.773)
O3': (-67.053,120.883,60.926)
Image (generated by PyMOL):