Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:1540:1552
Extra
PDB:
ATOM 1 O3' G A 539 103.047 -32.399 26.426 1.00 58.27 O
ATOM 2 P C A 540 103.329 -32.877 24.930 1.00 55.79 P
ATOM 3 OP1 C A 540 103.053 -34.328 24.891 1.00 56.00 O
ATOM 4 OP2 C A 540 104.660 -32.405 24.568 1.00 56.12 O
ATOM 5 O5' C A 540 102.242 -32.110 24.090 1.00 55.56 O
ATOM 6 C5' C A 540 100.925 -32.597 24.044 1.00 55.33 C
ATOM 7 C4' C A 540 100.112 -31.858 23.045 1.00 55.23 C
ATOM 8 O4' C A 540 99.886 -30.504 23.496 1.00 54.83 O
ATOM 9 C3' C A 540 100.751 -31.675 21.697 1.00 55.67 C
ATOM 10 O3' C A 540 100.722 -32.857 20.918 1.00 56.07 O
ATOM 11 C2' C A 540 99.932 -30.524 21.134 1.00 55.41 C
ATOM 12 O2' C A 540 98.631 -30.969 20.797 1.00 55.27 O
ATOM 13 C1' C A 540 99.807 -29.646 22.378 1.00 54.93 C
ATOM 14 N1 C A 540 100.895 -28.641 22.473 1.00 55.00 N
ATOM 15 C2 C A 540 100.829 -27.424 21.756 1.00 54.97 C
ATOM 16 O2 C A 540 99.853 -27.187 21.035 1.00 54.87 O
ATOM 17 N3 C A 540 101.834 -26.515 21.833 1.00 55.05 N
ATOM 18 C4 C A 540 102.865 -26.783 22.627 1.00 55.16 C
ATOM 19 N4 C A 540 103.847 -25.876 22.734 1.00 55.25 N
ATOM 20 C5 C A 540 102.938 -27.995 23.366 1.00 55.20 C
ATOM 21 C6 C A 540 101.952 -28.888 23.280 1.00 55.11 C
ATOM 22 P G A 541 101.645 -32.999 19.600 1.00 56.55 P
ATOM 23 OP1 G A 541 101.304 -34.333 18.991 1.00 56.88 O
ATOM 24 OP2 G A 541 103.061 -32.710 19.996 1.00 56.74 O
ATOM 25 O5' G A 541 101.121 -31.837 18.677 1.00 56.44 O
TER
ATOM 1 O3' A B 551 99.679 -16.965 19.036 1.00 47.88 O
ATOM 2 P A B 552 99.335 -17.605 20.465 1.00 49.83 P
ATOM 3 OP1 A B 552 97.869 -17.541 20.633 1.00 49.46 O
ATOM 4 OP2 A B 552 100.180 -16.947 21.443 1.00 49.73 O
ATOM 5 O5' A B 552 99.793 -19.107 20.317 1.00 50.12 O
ATOM 6 C5' A B 552 98.884 -20.115 19.948 1.00 50.11 C
ATOM 7 C4' A B 552 99.466 -21.480 20.164 1.00 50.34 C
ATOM 8 O4' A B 552 100.638 -21.626 19.344 1.00 50.83 O
ATOM 9 C3' A B 552 99.942 -21.791 21.569 1.00 50.14 C
ATOM 10 O3' A B 552 98.916 -22.281 22.371 1.00 49.77 O
ATOM 11 C2' A B 552 100.995 -22.841 21.325 1.00 50.58 C
ATOM 12 O2' A B 552 100.377 -24.090 21.061 1.00 50.66 O
ATOM 13 C1' A B 552 101.622 -22.353 20.034 1.00 50.98 C
ATOM 14 N9 A B 552 102.772 -21.472 20.296 1.00 51.09 N
ATOM 15 C8 A B 552 102.929 -20.155 19.979 1.00 51.06 C
ATOM 16 N7 A B 552 104.072 -19.657 20.364 1.00 51.20 N
ATOM 17 C5 A B 552 104.701 -20.710 20.961 1.00 51.33 C
ATOM 18 C6 A B 552 105.939 -20.803 21.574 1.00 51.51 C
ATOM 19 N6 A B 552 106.772 -19.773 21.637 1.00 51.60 N
ATOM 20 N1 A B 552 106.311 -21.985 22.084 1.00 51.63 N
ATOM 21 C2 A B 552 105.458 -23.015 21.987 1.00 51.55 C
ATOM 22 N3 A B 552 104.253 -23.053 21.435 1.00 51.38 N
ATOM 23 C4 A B 552 103.929 -21.842 20.926 1.00 51.27 C
ATOM 24 P G B 553 98.470 -21.520 23.691 1.00 47.68 P
ATOM 25 OP1 G B 553 97.639 -22.439 24.430 1.00 47.43 O
ATOM 26 OP2 G B 553 97.925 -20.239 23.293 1.00 47.50 O
ATOM 27 O5' G B 553 99.803 -21.254 24.467 1.00 47.78 O
TER
ATOM 2 P C A 540 103.329 -32.877 24.930 1.00 55.79 P
ATOM 3 OP1 C A 540 103.053 -34.328 24.891 1.00 56.00 O
ATOM 4 OP2 C A 540 104.660 -32.405 24.568 1.00 56.12 O
ATOM 5 O5' C A 540 102.242 -32.110 24.090 1.00 55.56 O
ATOM 6 C5' C A 540 100.925 -32.597 24.044 1.00 55.33 C
ATOM 7 C4' C A 540 100.112 -31.858 23.045 1.00 55.23 C
ATOM 8 O4' C A 540 99.886 -30.504 23.496 1.00 54.83 O
ATOM 9 C3' C A 540 100.751 -31.675 21.697 1.00 55.67 C
ATOM 10 O3' C A 540 100.722 -32.857 20.918 1.00 56.07 O
ATOM 11 C2' C A 540 99.932 -30.524 21.134 1.00 55.41 C
ATOM 12 O2' C A 540 98.631 -30.969 20.797 1.00 55.27 O
ATOM 13 C1' C A 540 99.807 -29.646 22.378 1.00 54.93 C
ATOM 14 N1 C A 540 100.895 -28.641 22.473 1.00 55.00 N
ATOM 15 C2 C A 540 100.829 -27.424 21.756 1.00 54.97 C
ATOM 16 O2 C A 540 99.853 -27.187 21.035 1.00 54.87 O
ATOM 17 N3 C A 540 101.834 -26.515 21.833 1.00 55.05 N
ATOM 18 C4 C A 540 102.865 -26.783 22.627 1.00 55.16 C
ATOM 19 N4 C A 540 103.847 -25.876 22.734 1.00 55.25 N
ATOM 20 C5 C A 540 102.938 -27.995 23.366 1.00 55.20 C
ATOM 21 C6 C A 540 101.952 -28.888 23.280 1.00 55.11 C
ATOM 22 P G A 541 101.645 -32.999 19.600 1.00 56.55 P
ATOM 23 OP1 G A 541 101.304 -34.333 18.991 1.00 56.88 O
ATOM 24 OP2 G A 541 103.061 -32.710 19.996 1.00 56.74 O
ATOM 25 O5' G A 541 101.121 -31.837 18.677 1.00 56.44 O
TER
ATOM 1 O3' A B 551 99.679 -16.965 19.036 1.00 47.88 O
ATOM 2 P A B 552 99.335 -17.605 20.465 1.00 49.83 P
ATOM 3 OP1 A B 552 97.869 -17.541 20.633 1.00 49.46 O
ATOM 4 OP2 A B 552 100.180 -16.947 21.443 1.00 49.73 O
ATOM 5 O5' A B 552 99.793 -19.107 20.317 1.00 50.12 O
ATOM 6 C5' A B 552 98.884 -20.115 19.948 1.00 50.11 C
ATOM 7 C4' A B 552 99.466 -21.480 20.164 1.00 50.34 C
ATOM 8 O4' A B 552 100.638 -21.626 19.344 1.00 50.83 O
ATOM 9 C3' A B 552 99.942 -21.791 21.569 1.00 50.14 C
ATOM 10 O3' A B 552 98.916 -22.281 22.371 1.00 49.77 O
ATOM 11 C2' A B 552 100.995 -22.841 21.325 1.00 50.58 C
ATOM 12 O2' A B 552 100.377 -24.090 21.061 1.00 50.66 O
ATOM 13 C1' A B 552 101.622 -22.353 20.034 1.00 50.98 C
ATOM 14 N9 A B 552 102.772 -21.472 20.296 1.00 51.09 N
ATOM 15 C8 A B 552 102.929 -20.155 19.979 1.00 51.06 C
ATOM 16 N7 A B 552 104.072 -19.657 20.364 1.00 51.20 N
ATOM 17 C5 A B 552 104.701 -20.710 20.961 1.00 51.33 C
ATOM 18 C6 A B 552 105.939 -20.803 21.574 1.00 51.51 C
ATOM 19 N6 A B 552 106.772 -19.773 21.637 1.00 51.60 N
ATOM 20 N1 A B 552 106.311 -21.985 22.084 1.00 51.63 N
ATOM 21 C2 A B 552 105.458 -23.015 21.987 1.00 51.55 C
ATOM 22 N3 A B 552 104.253 -23.053 21.435 1.00 51.38 N
ATOM 23 C4 A B 552 103.929 -21.842 20.926 1.00 51.27 C
ATOM 24 P G B 553 98.470 -21.520 23.691 1.00 47.68 P
ATOM 25 OP1 G B 553 97.639 -22.439 24.430 1.00 47.43 O
ATOM 26 OP2 G B 553 97.925 -20.239 23.293 1.00 47.50 O
ATOM 27 O5' G B 553 99.803 -21.254 24.467 1.00 47.78 O
TER
Atoms:
C2: (100.829,-27.424,21.756)
OP1: (103.053,-34.328,24.891)
OP2: (104.660,-32.405,24.568)
C4: (102.865,-26.783,22.627)
O5': (102.242,-32.110,24.090)
C3': (100.751,-31.675,21.697)
C1': (99.807,-29.646,22.378)
O4': (99.886,-30.504,23.496)
C5': (100.925,-32.597,24.044)
P: (103.329,-32.877,24.930)
O2: (99.853,-27.187,21.035)
C4': (100.112,-31.858,23.045)
C2': (99.932,-30.524,21.134)
O2': (98.631,-30.969,20.797)
N1: (100.895,-28.641,22.473)
N3: (101.834,-26.515,21.833)
N4: (103.847,-25.876,22.734)
C6: (101.952,-28.888,23.280)
C5: (102.938,-27.995,23.366)
O3': (100.722,-32.857,20.918)
OP1: (103.053,-34.328,24.891)
OP2: (104.660,-32.405,24.568)
C4: (102.865,-26.783,22.627)
O5': (102.242,-32.110,24.090)
C3': (100.751,-31.675,21.697)
C1': (99.807,-29.646,22.378)
O4': (99.886,-30.504,23.496)
C5': (100.925,-32.597,24.044)
P: (103.329,-32.877,24.930)
O2: (99.853,-27.187,21.035)
C4': (100.112,-31.858,23.045)
C2': (99.932,-30.524,21.134)
O2': (98.631,-30.969,20.797)
N1: (100.895,-28.641,22.473)
N3: (101.834,-26.515,21.833)
N4: (103.847,-25.876,22.734)
C6: (101.952,-28.888,23.280)
C5: (102.938,-27.995,23.366)
O3': (100.722,-32.857,20.918)
OP1: (97.869,-17.541,20.633)
OP2: (100.180,-16.947,21.443)
C3': (99.942,-21.791,21.569)
C1': (101.622,-22.353,20.034)
C5': (98.884,-20.115,19.948)
O4': (100.638,-21.626,19.344)
C8: (102.929,-20.155,19.979)
O2': (100.377,-24.090,21.061)
C6: (105.939,-20.803,21.574)
C5: (104.701,-20.710,20.961)
C4: (103.929,-21.842,20.926)
P: (99.335,-17.605,20.465)
C4': (99.466,-21.480,20.164)
C2': (100.995,-22.841,21.325)
C2: (105.458,-23.015,21.987)
N1: (106.311,-21.985,22.084)
N3: (104.253,-23.053,21.435)
N6: (106.772,-19.773,21.637)
N7: (104.072,-19.657,20.364)
N9: (102.772,-21.472,20.296)
O5': (99.793,-19.107,20.317)
O3': (98.916,-22.281,22.371)
OP2: (100.180,-16.947,21.443)
C3': (99.942,-21.791,21.569)
C1': (101.622,-22.353,20.034)
C5': (98.884,-20.115,19.948)
O4': (100.638,-21.626,19.344)
C8: (102.929,-20.155,19.979)
O2': (100.377,-24.090,21.061)
C6: (105.939,-20.803,21.574)
C5: (104.701,-20.710,20.961)
C4: (103.929,-21.842,20.926)
P: (99.335,-17.605,20.465)
C4': (99.466,-21.480,20.164)
C2': (100.995,-22.841,21.325)
C2: (105.458,-23.015,21.987)
N1: (106.311,-21.985,22.084)
N3: (104.253,-23.053,21.435)
N6: (106.772,-19.773,21.637)
N7: (104.072,-19.657,20.364)
N9: (102.772,-21.472,20.296)
O5': (99.793,-19.107,20.317)
O3': (98.916,-22.281,22.371)
Image (generated by PyMOL):