Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:333:345
Extra
PDB:
ATOM 1 O3' U A 32 2.287-105.043 41.120 1.00 81.40 O
ATOM 2 P C A 33 2.571-103.618 41.828 1.00 84.14 P
ATOM 3 OP1 C A 33 1.957-103.673 43.183 1.00 83.69 O
ATOM 4 OP2 C A 33 2.109-102.553 40.878 1.00 84.15 O
ATOM 5 O5' C A 33 4.176-103.594 41.946 1.00 83.56 O
ATOM 6 C5' C A 33 4.892-104.670 42.541 1.00 83.66 C
ATOM 7 C4' C A 33 6.382-104.601 42.241 1.00 83.32 C
ATOM 8 O4' C A 33 6.631-104.858 40.834 1.00 84.11 O
ATOM 9 C3' C A 33 7.079-103.272 42.497 1.00 82.20 C
ATOM 10 O3' C A 33 7.392-103.073 43.856 1.00 81.31 O
ATOM 11 C2' C A 33 8.310-103.378 41.619 1.00 82.35 C
ATOM 12 O2' C A 33 9.276-104.195 42.246 1.00 82.21 O
ATOM 13 C1' C A 33 7.758-104.124 40.404 1.00 83.57 C
ATOM 14 N1 C A 33 7.326-103.192 39.319 1.00 83.72 N
ATOM 15 C2 C A 33 8.219-102.892 38.285 1.00 83.84 C
ATOM 16 O2 C A 33 9.345-103.435 38.334 1.00 83.80 O
ATOM 17 N3 C A 33 7.821-102.035 37.292 1.00 83.99 N
ATOM 18 C4 C A 33 6.604-101.479 37.305 1.00 84.01 C
ATOM 19 N4 C A 33 6.238-100.633 36.335 1.00 84.16 N
ATOM 20 C5 C A 33 5.685-101.767 38.343 1.00 83.90 C
ATOM 21 C6 C A 33 6.077-102.618 39.300 1.00 83.77 C
ATOM 22 P C A 34 6.691-101.888 44.681 1.00 85.95 P
ATOM 23 OP1 C A 34 6.485-102.398 46.050 1.00 85.63 O
ATOM 24 OP2 C A 34 5.508-101.415 43.895 1.00 86.44 O
ATOM 25 O5' C A 34 7.812-100.774 44.695 1.00 84.98 O
TER
ATOM 1 O3' A B 44 12.876 -94.428 37.200 1.00 76.50 O
ATOM 2 P A B 45 13.549 -95.144 35.937 1.00 72.88 P
ATOM 3 OP1 A B 45 15.012 -95.268 36.242 1.00 72.41 O
ATOM 4 OP2 A B 45 13.136 -94.385 34.726 1.00 73.25 O
ATOM 5 O5' A B 45 12.855 -96.579 35.936 1.00 73.83 O
ATOM 6 C5' A B 45 12.905 -97.399 37.091 1.00 73.64 C
ATOM 7 C4' A B 45 11.915 -98.531 37.021 1.00 74.56 C
ATOM 8 O4' A B 45 10.562 -98.008 37.004 1.00 74.65 O
ATOM 9 C3' A B 45 11.990 -99.426 35.797 1.00 75.70 C
ATOM 10 O3' A B 45 13.043-100.395 35.894 1.00 75.92 O
ATOM 11 C2' A B 45 10.577-100.021 35.768 1.00 76.44 C
ATOM 12 O2' A B 45 10.442-101.029 36.755 1.00 76.51 O
ATOM 13 C1' A B 45 9.735 -98.819 36.211 1.00 75.75 C
ATOM 14 N9 A B 45 9.250 -97.994 35.077 1.00 76.04 N
ATOM 15 C8 A B 45 9.804 -96.796 34.757 1.00 75.41 C
ATOM 16 N7 A B 45 9.250 -96.186 33.755 1.00 75.78 N
ATOM 17 C5 A B 45 8.241 -97.014 33.373 1.00 76.72 C
ATOM 18 C6 A B 45 7.307 -96.878 32.340 1.00 77.47 C
ATOM 19 N6 A B 45 7.284 -95.819 31.525 1.00 77.35 N
ATOM 20 N1 A B 45 6.399 -97.872 32.183 1.00 78.36 N
ATOM 21 C2 A B 45 6.465 -98.914 33.035 1.00 78.45 C
ATOM 22 N3 A B 45 7.313 -99.152 34.047 1.00 77.79 N
ATOM 23 C4 A B 45 8.206 -98.142 34.174 1.00 76.91 C
ATOM 24 P C B 46 13.534-101.255 34.610 1.00 69.75 P
ATOM 25 OP1 C B 46 14.519-102.267 35.100 1.00 69.80 O
ATOM 26 OP2 C B 46 13.952-100.296 33.556 1.00 69.69 O
ATOM 27 O5' C B 46 12.205-101.965 34.157 1.00 70.76 O
TER
ATOM 2 P C A 33 2.571-103.618 41.828 1.00 84.14 P
ATOM 3 OP1 C A 33 1.957-103.673 43.183 1.00 83.69 O
ATOM 4 OP2 C A 33 2.109-102.553 40.878 1.00 84.15 O
ATOM 5 O5' C A 33 4.176-103.594 41.946 1.00 83.56 O
ATOM 6 C5' C A 33 4.892-104.670 42.541 1.00 83.66 C
ATOM 7 C4' C A 33 6.382-104.601 42.241 1.00 83.32 C
ATOM 8 O4' C A 33 6.631-104.858 40.834 1.00 84.11 O
ATOM 9 C3' C A 33 7.079-103.272 42.497 1.00 82.20 C
ATOM 10 O3' C A 33 7.392-103.073 43.856 1.00 81.31 O
ATOM 11 C2' C A 33 8.310-103.378 41.619 1.00 82.35 C
ATOM 12 O2' C A 33 9.276-104.195 42.246 1.00 82.21 O
ATOM 13 C1' C A 33 7.758-104.124 40.404 1.00 83.57 C
ATOM 14 N1 C A 33 7.326-103.192 39.319 1.00 83.72 N
ATOM 15 C2 C A 33 8.219-102.892 38.285 1.00 83.84 C
ATOM 16 O2 C A 33 9.345-103.435 38.334 1.00 83.80 O
ATOM 17 N3 C A 33 7.821-102.035 37.292 1.00 83.99 N
ATOM 18 C4 C A 33 6.604-101.479 37.305 1.00 84.01 C
ATOM 19 N4 C A 33 6.238-100.633 36.335 1.00 84.16 N
ATOM 20 C5 C A 33 5.685-101.767 38.343 1.00 83.90 C
ATOM 21 C6 C A 33 6.077-102.618 39.300 1.00 83.77 C
ATOM 22 P C A 34 6.691-101.888 44.681 1.00 85.95 P
ATOM 23 OP1 C A 34 6.485-102.398 46.050 1.00 85.63 O
ATOM 24 OP2 C A 34 5.508-101.415 43.895 1.00 86.44 O
ATOM 25 O5' C A 34 7.812-100.774 44.695 1.00 84.98 O
TER
ATOM 1 O3' A B 44 12.876 -94.428 37.200 1.00 76.50 O
ATOM 2 P A B 45 13.549 -95.144 35.937 1.00 72.88 P
ATOM 3 OP1 A B 45 15.012 -95.268 36.242 1.00 72.41 O
ATOM 4 OP2 A B 45 13.136 -94.385 34.726 1.00 73.25 O
ATOM 5 O5' A B 45 12.855 -96.579 35.936 1.00 73.83 O
ATOM 6 C5' A B 45 12.905 -97.399 37.091 1.00 73.64 C
ATOM 7 C4' A B 45 11.915 -98.531 37.021 1.00 74.56 C
ATOM 8 O4' A B 45 10.562 -98.008 37.004 1.00 74.65 O
ATOM 9 C3' A B 45 11.990 -99.426 35.797 1.00 75.70 C
ATOM 10 O3' A B 45 13.043-100.395 35.894 1.00 75.92 O
ATOM 11 C2' A B 45 10.577-100.021 35.768 1.00 76.44 C
ATOM 12 O2' A B 45 10.442-101.029 36.755 1.00 76.51 O
ATOM 13 C1' A B 45 9.735 -98.819 36.211 1.00 75.75 C
ATOM 14 N9 A B 45 9.250 -97.994 35.077 1.00 76.04 N
ATOM 15 C8 A B 45 9.804 -96.796 34.757 1.00 75.41 C
ATOM 16 N7 A B 45 9.250 -96.186 33.755 1.00 75.78 N
ATOM 17 C5 A B 45 8.241 -97.014 33.373 1.00 76.72 C
ATOM 18 C6 A B 45 7.307 -96.878 32.340 1.00 77.47 C
ATOM 19 N6 A B 45 7.284 -95.819 31.525 1.00 77.35 N
ATOM 20 N1 A B 45 6.399 -97.872 32.183 1.00 78.36 N
ATOM 21 C2 A B 45 6.465 -98.914 33.035 1.00 78.45 C
ATOM 22 N3 A B 45 7.313 -99.152 34.047 1.00 77.79 N
ATOM 23 C4 A B 45 8.206 -98.142 34.174 1.00 76.91 C
ATOM 24 P C B 46 13.534-101.255 34.610 1.00 69.75 P
ATOM 25 OP1 C B 46 14.519-102.267 35.100 1.00 69.80 O
ATOM 26 OP2 C B 46 13.952-100.296 33.556 1.00 69.69 O
ATOM 27 O5' C B 46 12.205-101.965 34.157 1.00 70.76 O
TER
Atoms:
C2: (8.219,-102.892,38.285)
OP1: (1.957,-103.673,43.183)
OP2: (2.109,-102.553,40.878)
C4: (6.604,-101.479,37.305)
O5': (4.176,-103.594,41.946)
C3': (7.079,-103.272,42.497)
C1': (7.758,-104.124,40.404)
O4': (6.631,-104.858,40.834)
C5': (4.892,-104.670,42.541)
P: (2.571,-103.618,41.828)
O2: (9.345,-103.435,38.334)
C4': (6.382,-104.601,42.241)
C2': (8.310,-103.378,41.619)
O2': (9.276,-104.195,42.246)
N1: (7.326,-103.192,39.319)
N3: (7.821,-102.035,37.292)
N4: (6.238,-100.633,36.335)
C6: (6.077,-102.618,39.300)
C5: (5.685,-101.767,38.343)
O3': (7.392,-103.073,43.856)
OP1: (1.957,-103.673,43.183)
OP2: (2.109,-102.553,40.878)
C4: (6.604,-101.479,37.305)
O5': (4.176,-103.594,41.946)
C3': (7.079,-103.272,42.497)
C1': (7.758,-104.124,40.404)
O4': (6.631,-104.858,40.834)
C5': (4.892,-104.670,42.541)
P: (2.571,-103.618,41.828)
O2: (9.345,-103.435,38.334)
C4': (6.382,-104.601,42.241)
C2': (8.310,-103.378,41.619)
O2': (9.276,-104.195,42.246)
N1: (7.326,-103.192,39.319)
N3: (7.821,-102.035,37.292)
N4: (6.238,-100.633,36.335)
C6: (6.077,-102.618,39.300)
C5: (5.685,-101.767,38.343)
O3': (7.392,-103.073,43.856)
OP1: (15.012,-95.268,36.242)
OP2: (13.136,-94.385,34.726)
C3': (11.990,-99.426,35.797)
C1': (9.735,-98.819,36.211)
C5': (12.905,-97.399,37.091)
O4': (10.562,-98.008,37.004)
C8: (9.804,-96.796,34.757)
O2': (10.442,-101.029,36.755)
C6: (7.307,-96.878,32.340)
C5: (8.241,-97.014,33.373)
C4: (8.206,-98.142,34.174)
P: (13.549,-95.144,35.937)
C4': (11.915,-98.531,37.021)
C2': (10.577,-100.021,35.768)
C2: (6.465,-98.914,33.035)
N1: (6.399,-97.872,32.183)
N3: (7.313,-99.152,34.047)
N6: (7.284,-95.819,31.525)
N7: (9.250,-96.186,33.755)
N9: (9.250,-97.994,35.077)
O5': (12.855,-96.579,35.936)
O3': (13.043,-100.395,35.894)
OP2: (13.136,-94.385,34.726)
C3': (11.990,-99.426,35.797)
C1': (9.735,-98.819,36.211)
C5': (12.905,-97.399,37.091)
O4': (10.562,-98.008,37.004)
C8: (9.804,-96.796,34.757)
O2': (10.442,-101.029,36.755)
C6: (7.307,-96.878,32.340)
C5: (8.241,-97.014,33.373)
C4: (8.206,-98.142,34.174)
P: (13.549,-95.144,35.937)
C4': (11.915,-98.531,37.021)
C2': (10.577,-100.021,35.768)
C2: (6.465,-98.914,33.035)
N1: (6.399,-97.872,32.183)
N3: (7.313,-99.152,34.047)
N6: (7.284,-95.819,31.525)
N7: (9.250,-96.186,33.755)
N9: (9.250,-97.994,35.077)
O5': (12.855,-96.579,35.936)
O3': (13.043,-100.395,35.894)
Image (generated by PyMOL):