Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:334:344
Extra
PDB:
ATOM 1 O3' C A 33 7.392-103.073 43.856 1.00 81.31 O
ATOM 2 P C A 34 6.691-101.888 44.681 1.00 85.95 P
ATOM 3 OP1 C A 34 6.485-102.398 46.050 1.00 85.63 O
ATOM 4 OP2 C A 34 5.508-101.415 43.895 1.00 86.44 O
ATOM 5 O5' C A 34 7.812-100.774 44.695 1.00 84.98 O
ATOM 6 C5' C A 34 9.017-101.001 45.388 1.00 84.40 C
ATOM 7 C4' C A 34 10.104-100.092 44.912 1.00 83.81 C
ATOM 8 O4' C A 34 10.399-100.352 43.525 1.00 84.56 O
ATOM 9 C3' C A 34 9.802 -98.605 44.942 1.00 83.07 C
ATOM 10 O3' C A 34 9.908 -98.045 46.235 1.00 82.10 O
ATOM 11 C2' C A 34 10.837 -98.064 43.979 1.00 82.96 C
ATOM 12 O2' C A 34 12.114 -98.001 44.602 1.00 82.25 O
ATOM 13 C1' C A 34 10.857 -99.163 42.919 1.00 84.08 C
ATOM 14 N1 C A 34 9.968 -98.830 41.826 1.00 84.71 N
ATOM 15 C2 C A 34 10.458 -97.952 40.873 1.00 84.58 C
ATOM 16 O2 C A 34 11.625 -97.555 40.969 1.00 83.99 O
ATOM 17 N3 C A 34 9.642 -97.588 39.858 1.00 85.14 N
ATOM 18 C4 C A 34 8.396 -98.062 39.790 1.00 85.79 C
ATOM 19 N4 C A 34 7.638 -97.686 38.760 1.00 86.34 N
ATOM 20 C5 C A 34 7.878 -98.957 40.771 1.00 85.93 C
ATOM 21 C6 C A 34 8.692 -99.303 41.778 1.00 85.36 C
ATOM 22 P C A 35 8.731 -97.132 46.827 1.00 79.28 P
ATOM 23 OP1 C A 35 9.101 -96.815 48.222 1.00 78.34 O
ATOM 24 OP2 C A 35 7.464 -97.837 46.579 1.00 80.16 O
ATOM 25 O5' C A 35 8.797 -95.798 45.918 1.00 79.00 O
TER
ATOM 1 O3' C B 43 11.661 -88.995 35.940 1.00 60.34 O
ATOM 2 P A B 44 12.121 -90.175 34.981 1.00 75.70 P
ATOM 3 OP1 A B 44 13.583 -90.009 34.749 1.00 75.37 O
ATOM 4 OP2 A B 44 11.225 -90.141 33.850 1.00 76.53 O
ATOM 5 O5' A B 44 11.836 -91.457 35.867 1.00 75.95 O
ATOM 6 C5' A B 44 11.865 -91.364 37.278 1.00 75.14 C
ATOM 7 C4' A B 44 11.397 -92.628 37.921 1.00 75.57 C
ATOM 8 O4' A B 44 9.967 -92.555 38.153 1.00 75.81 O
ATOM 9 C3' A B 44 11.582 -93.889 37.094 1.00 76.62 C
ATOM 10 O3' A B 44 12.876 -94.428 37.200 1.00 76.50 O
ATOM 11 C2' A B 44 10.500 -94.812 37.629 1.00 77.11 C
ATOM 12 O2' A B 44 10.903 -95.384 38.861 1.00 76.65 O
ATOM 13 C1' A B 44 9.376 -93.822 37.904 1.00 76.76 C
ATOM 14 N9 A B 44 8.473 -93.682 36.755 1.00 77.54 N
ATOM 15 C8 A B 44 8.441 -92.607 35.897 1.00 77.44 C
ATOM 16 N7 A B 44 7.523 -92.709 34.989 1.00 78.24 N
ATOM 17 C5 A B 44 6.912 -93.944 35.260 1.00 78.91 C
ATOM 18 C6 A B 44 5.862 -94.659 34.647 1.00 79.91 C
ATOM 19 N6 A B 44 5.182 -94.231 33.591 1.00 80.45 N
ATOM 20 N1 A B 44 5.508 -95.829 35.181 1.00 80.36 N
ATOM 21 C2 A B 44 6.166 -96.285 36.237 1.00 79.86 C
ATOM 22 N3 A B 44 7.175 -95.731 36.893 1.00 78.92 N
ATOM 23 C4 A B 44 7.496 -94.548 36.354 1.00 78.48 C
ATOM 24 P A B 45 13.549 -95.144 35.937 1.00 72.88 P
ATOM 25 OP1 A B 45 15.012 -95.268 36.242 1.00 72.41 O
ATOM 26 OP2 A B 45 13.136 -94.385 34.726 1.00 73.25 O
ATOM 27 O5' A B 45 12.855 -96.579 35.936 1.00 73.83 O
TER
ATOM 2 P C A 34 6.691-101.888 44.681 1.00 85.95 P
ATOM 3 OP1 C A 34 6.485-102.398 46.050 1.00 85.63 O
ATOM 4 OP2 C A 34 5.508-101.415 43.895 1.00 86.44 O
ATOM 5 O5' C A 34 7.812-100.774 44.695 1.00 84.98 O
ATOM 6 C5' C A 34 9.017-101.001 45.388 1.00 84.40 C
ATOM 7 C4' C A 34 10.104-100.092 44.912 1.00 83.81 C
ATOM 8 O4' C A 34 10.399-100.352 43.525 1.00 84.56 O
ATOM 9 C3' C A 34 9.802 -98.605 44.942 1.00 83.07 C
ATOM 10 O3' C A 34 9.908 -98.045 46.235 1.00 82.10 O
ATOM 11 C2' C A 34 10.837 -98.064 43.979 1.00 82.96 C
ATOM 12 O2' C A 34 12.114 -98.001 44.602 1.00 82.25 O
ATOM 13 C1' C A 34 10.857 -99.163 42.919 1.00 84.08 C
ATOM 14 N1 C A 34 9.968 -98.830 41.826 1.00 84.71 N
ATOM 15 C2 C A 34 10.458 -97.952 40.873 1.00 84.58 C
ATOM 16 O2 C A 34 11.625 -97.555 40.969 1.00 83.99 O
ATOM 17 N3 C A 34 9.642 -97.588 39.858 1.00 85.14 N
ATOM 18 C4 C A 34 8.396 -98.062 39.790 1.00 85.79 C
ATOM 19 N4 C A 34 7.638 -97.686 38.760 1.00 86.34 N
ATOM 20 C5 C A 34 7.878 -98.957 40.771 1.00 85.93 C
ATOM 21 C6 C A 34 8.692 -99.303 41.778 1.00 85.36 C
ATOM 22 P C A 35 8.731 -97.132 46.827 1.00 79.28 P
ATOM 23 OP1 C A 35 9.101 -96.815 48.222 1.00 78.34 O
ATOM 24 OP2 C A 35 7.464 -97.837 46.579 1.00 80.16 O
ATOM 25 O5' C A 35 8.797 -95.798 45.918 1.00 79.00 O
TER
ATOM 1 O3' C B 43 11.661 -88.995 35.940 1.00 60.34 O
ATOM 2 P A B 44 12.121 -90.175 34.981 1.00 75.70 P
ATOM 3 OP1 A B 44 13.583 -90.009 34.749 1.00 75.37 O
ATOM 4 OP2 A B 44 11.225 -90.141 33.850 1.00 76.53 O
ATOM 5 O5' A B 44 11.836 -91.457 35.867 1.00 75.95 O
ATOM 6 C5' A B 44 11.865 -91.364 37.278 1.00 75.14 C
ATOM 7 C4' A B 44 11.397 -92.628 37.921 1.00 75.57 C
ATOM 8 O4' A B 44 9.967 -92.555 38.153 1.00 75.81 O
ATOM 9 C3' A B 44 11.582 -93.889 37.094 1.00 76.62 C
ATOM 10 O3' A B 44 12.876 -94.428 37.200 1.00 76.50 O
ATOM 11 C2' A B 44 10.500 -94.812 37.629 1.00 77.11 C
ATOM 12 O2' A B 44 10.903 -95.384 38.861 1.00 76.65 O
ATOM 13 C1' A B 44 9.376 -93.822 37.904 1.00 76.76 C
ATOM 14 N9 A B 44 8.473 -93.682 36.755 1.00 77.54 N
ATOM 15 C8 A B 44 8.441 -92.607 35.897 1.00 77.44 C
ATOM 16 N7 A B 44 7.523 -92.709 34.989 1.00 78.24 N
ATOM 17 C5 A B 44 6.912 -93.944 35.260 1.00 78.91 C
ATOM 18 C6 A B 44 5.862 -94.659 34.647 1.00 79.91 C
ATOM 19 N6 A B 44 5.182 -94.231 33.591 1.00 80.45 N
ATOM 20 N1 A B 44 5.508 -95.829 35.181 1.00 80.36 N
ATOM 21 C2 A B 44 6.166 -96.285 36.237 1.00 79.86 C
ATOM 22 N3 A B 44 7.175 -95.731 36.893 1.00 78.92 N
ATOM 23 C4 A B 44 7.496 -94.548 36.354 1.00 78.48 C
ATOM 24 P A B 45 13.549 -95.144 35.937 1.00 72.88 P
ATOM 25 OP1 A B 45 15.012 -95.268 36.242 1.00 72.41 O
ATOM 26 OP2 A B 45 13.136 -94.385 34.726 1.00 73.25 O
ATOM 27 O5' A B 45 12.855 -96.579 35.936 1.00 73.83 O
TER
Atoms:
C2: (10.458,-97.952,40.873)
OP1: (6.485,-102.398,46.050)
OP2: (5.508,-101.415,43.895)
C4: (8.396,-98.062,39.790)
O5': (7.812,-100.774,44.695)
C3': (9.802,-98.605,44.942)
C1': (10.857,-99.163,42.919)
O4': (10.399,-100.352,43.525)
C5': (9.017,-101.001,45.388)
P: (6.691,-101.888,44.681)
O2: (11.625,-97.555,40.969)
C4': (10.104,-100.092,44.912)
C2': (10.837,-98.064,43.979)
O2': (12.114,-98.001,44.602)
N1: (9.968,-98.830,41.826)
N3: (9.642,-97.588,39.858)
N4: (7.638,-97.686,38.760)
C6: (8.692,-99.303,41.778)
C5: (7.878,-98.957,40.771)
O3': (9.908,-98.045,46.235)
OP1: (6.485,-102.398,46.050)
OP2: (5.508,-101.415,43.895)
C4: (8.396,-98.062,39.790)
O5': (7.812,-100.774,44.695)
C3': (9.802,-98.605,44.942)
C1': (10.857,-99.163,42.919)
O4': (10.399,-100.352,43.525)
C5': (9.017,-101.001,45.388)
P: (6.691,-101.888,44.681)
O2: (11.625,-97.555,40.969)
C4': (10.104,-100.092,44.912)
C2': (10.837,-98.064,43.979)
O2': (12.114,-98.001,44.602)
N1: (9.968,-98.830,41.826)
N3: (9.642,-97.588,39.858)
N4: (7.638,-97.686,38.760)
C6: (8.692,-99.303,41.778)
C5: (7.878,-98.957,40.771)
O3': (9.908,-98.045,46.235)
OP1: (13.583,-90.009,34.749)
OP2: (11.225,-90.141,33.850)
C3': (11.582,-93.889,37.094)
C1': (9.376,-93.822,37.904)
C5': (11.865,-91.364,37.278)
O4': (9.967,-92.555,38.153)
C8: (8.441,-92.607,35.897)
O2': (10.903,-95.384,38.861)
C6: (5.862,-94.659,34.647)
C5: (6.912,-93.944,35.260)
C4: (7.496,-94.548,36.354)
P: (12.121,-90.175,34.981)
C4': (11.397,-92.628,37.921)
C2': (10.500,-94.812,37.629)
C2: (6.166,-96.285,36.237)
N1: (5.508,-95.829,35.181)
N3: (7.175,-95.731,36.893)
N6: (5.182,-94.231,33.591)
N7: (7.523,-92.709,34.989)
N9: (8.473,-93.682,36.755)
O5': (11.836,-91.457,35.867)
O3': (12.876,-94.428,37.200)
OP2: (11.225,-90.141,33.850)
C3': (11.582,-93.889,37.094)
C1': (9.376,-93.822,37.904)
C5': (11.865,-91.364,37.278)
O4': (9.967,-92.555,38.153)
C8: (8.441,-92.607,35.897)
O2': (10.903,-95.384,38.861)
C6: (5.862,-94.659,34.647)
C5: (6.912,-93.944,35.260)
C4: (7.496,-94.548,36.354)
P: (12.121,-90.175,34.981)
C4': (11.397,-92.628,37.921)
C2': (10.500,-94.812,37.629)
C2: (6.166,-96.285,36.237)
N1: (5.508,-95.829,35.181)
N3: (7.175,-95.731,36.893)
N6: (5.182,-94.231,33.591)
N7: (7.523,-92.709,34.989)
N9: (8.473,-93.682,36.755)
O5': (11.836,-91.457,35.867)
O3': (12.876,-94.428,37.200)
Image (generated by PyMOL):