ClaRNA

Doublet info:

Details

Nucleotide types: GA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1GAX:D0:D71

Extra

PDB:
ATOM 1 OP3 G A 0 168.168 105.895 -8.980 1.00106.29 O
ATOM 2 P G A 0 168.520 106.699 -10.226 1.00106.15 P
ATOM 3 OP1 G A 0 168.021 106.028 -11.498 1.00107.74 O
ATOM 4 OP2 G A 0 168.148 108.175 -10.139 1.00104.30 O
ATOM 5 O5' G A 0 170.147 106.674 -10.329 1.00106.40 O
ATOM 6 C5' G A 0 170.847 105.453 -10.636 1.00101.11 C
ATOM 7 C4' G A 0 171.717 105.033 -9.471 1.00101.13 C
ATOM 8 O4' G A 0 172.529 106.154 -9.036 1.00102.39 O
ATOM 9 C3' G A 0 170.992 104.589 -8.211 1.00 99.81 C
ATOM 10 O3' G A 0 170.624 103.217 -8.328 1.00102.71 O
ATOM 11 C2' G A 0 172.051 104.798 -7.133 1.00 97.30 C
ATOM 12 O2' G A 0 172.951 103.712 -7.042 1.00 87.02 O
ATOM 13 C1' G A 0 172.787 106.039 -7.650 1.00 99.26 C
ATOM 14 N9 G A 0 172.415 107.296 -7.007 1.00102.93 N
ATOM 15 C8 G A 0 171.335 108.098 -7.296 1.00101.79 C
ATOM 16 N7 G A 0 171.280 109.170 -6.551 1.00102.80 N
ATOM 17 C5 G A 0 172.390 109.068 -5.719 1.00104.04 C
ATOM 18 C6 G A 0 172.862 109.937 -4.698 1.00102.38 C
ATOM 19 O6 G A 0 172.378 111.008 -4.312 1.00100.86 O
ATOM 20 N1 G A 0 174.025 109.447 -4.106 1.00100.30 N
ATOM 21 C2 G A 0 174.652 108.274 -4.448 1.00100.20 C
ATOM 22 N2 G A 0 175.754 107.963 -3.758 1.00 98.42 N
ATOM 23 N3 G A 0 174.226 107.460 -5.397 1.00103.65 N
ATOM 24 C4 G A 0 173.098 107.916 -5.987 1.00104.63 C
ATOM 25 P G A 1 169.887 102.481 -7.107 1.00103.41 P
ATOM 26 OP1 G A 1 169.418 101.146 -7.561 1.00104.07 O
ATOM 27 OP2 G A 1 168.915 103.447 -6.535 1.00101.30 O
ATOM 28 O5' G A 1 171.050 102.247 -6.047 1.00102.80 O
TER

ATOM 1 O3' C B 70 179.490 110.558 1.901 1.00 96.81 O
ATOM 2 P A B 71 180.255 111.542 0.885 1.00100.46 P
ATOM 3 OP1 A B 71 181.701 111.434 1.180 1.00102.82 O
ATOM 4 OP2 A B 71 179.597 112.878 0.937 1.00 95.72 O
ATOM 5 O5' A B 71 179.975 110.882 -0.543 1.00109.50 O
ATOM 6 C5' A B 71 180.223 109.485 -0.772 1.00121.01 C
ATOM 7 C4' A B 71 179.757 109.069 -2.159 1.00128.28 C
ATOM 8 O4' A B 71 178.307 109.160 -2.260 1.00130.00 O
ATOM 9 C3' A B 71 180.268 109.920 -3.309 1.00132.04 C
ATOM 10 O3' A B 71 181.583 109.544 -3.692 1.00138.93 O
ATOM 11 C2' A B 71 179.222 109.661 -4.387 1.00129.78 C
ATOM 12 O2' A B 71 179.391 108.424 -5.055 1.00123.26 O
ATOM 13 C1' A B 71 177.942 109.643 -3.548 1.00128.80 C
ATOM 14 N9 A B 71 177.369 110.981 -3.380 1.00127.58 N
ATOM 15 C8 A B 71 177.641 111.880 -2.376 1.00125.80 C
ATOM 16 N7 A B 71 177.013 113.023 -2.503 1.00126.14 N
ATOM 17 C5 A B 71 176.268 112.867 -3.663 1.00126.55 C
ATOM 18 C6 A B 71 175.395 113.732 -4.348 1.00126.32 C
ATOM 19 N6 A B 71 175.121 114.979 -3.949 1.00123.63 N
ATOM 20 N1 A B 71 174.809 113.268 -5.475 1.00126.45 N
ATOM 21 C2 A B 71 175.091 112.021 -5.878 1.00125.87 C
ATOM 22 N3 A B 71 175.899 111.116 -5.323 1.00126.22 N
ATOM 23 C4 A B 71 176.466 111.608 -4.207 1.00126.71 C
ATOM 24 P C B 72 182.645 110.683 -4.082 1.00144.55 P
ATOM 25 OP1 C B 72 183.945 110.020 -4.368 1.00141.81 O
ATOM 26 OP2 C B 72 182.578 111.751 -3.051 1.00142.97 O
ATOM 27 O5' C B 72 182.051 111.285 -5.433 1.00150.22 O
TER

Atoms:
OP1: (168.021,106.028,-11.498)
OP2: (168.148,108.175,-10.139)
OP3: (168.168,105.895,-8.980)
C3': (170.992,104.589,-8.211)
C1': (172.787,106.039,-7.650)
C5': (170.847,105.453,-10.636)
O6: (172.378,111.008,-4.312)
O4': (172.529,106.154,-9.036)
C8: (171.335,108.098,-7.296)
C2: (174.652,108.274,-4.448)
C6: (172.862,109.937,-4.698)
C5: (172.390,109.068,-5.719)
C4: (173.098,107.916,-5.987)
P: (168.520,106.699,-10.226)
C4': (171.717,105.033,-9.471)
C2': (172.051,104.798,-7.133)
O2': (172.951,103.712,-7.042)
N1: (174.025,109.447,-4.106)
N2: (175.754,107.963,-3.758)
N3: (174.226,107.460,-5.397)
N7: (171.280,109.170,-6.551)
N9: (172.415,107.296,-7.007)
O5': (170.147,106.674,-10.329)
O3': (170.624,103.217,-8.328)
OP1: (181.701,111.434,1.180)
OP2: (179.597,112.878,0.937)
C3': (180.268,109.920,-3.309)
C1': (177.942,109.643,-3.548)
C5': (180.223,109.485,-0.772)
O4': (178.307,109.160,-2.260)
C8: (177.641,111.880,-2.376)
O2': (179.391,108.424,-5.055)
C6: (175.395,113.732,-4.348)
C5: (176.268,112.867,-3.663)
C4: (176.466,111.608,-4.207)
P: (180.255,111.542,0.885)
C4': (179.757,109.069,-2.159)
C2': (179.222,109.661,-4.387)
C2: (175.091,112.021,-5.878)
N1: (174.809,113.268,-5.475)
N3: (175.899,111.116,-5.323)
N6: (175.121,114.979,-3.949)
N7: (177.013,113.023,-2.503)
N9: (177.369,110.981,-3.380)
O5': (179.975,110.882,-0.543)
O3': (181.583,109.544,-3.692)
Image (generated by PyMOL):
PyMOL image
show in jmol