Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1U8D:A47:A20
Extra
PDB:
ATOM 1 O3' C A 46 47.139 13.091 6.584 1.00 20.87 O
ATOM 2 P G A 47 48.728 12.846 6.660 1.00 24.16 P
ATOM 3 OP1 G A 47 49.270 13.445 5.410 1.00 23.67 O
ATOM 4 OP2 G A 47 48.943 11.426 6.942 1.00 23.26 O
ATOM 5 O5' G A 47 49.205 13.690 7.911 1.00 26.62 O
ATOM 6 C5' G A 47 50.589 13.855 8.182 1.00 30.96 C
ATOM 7 C4' G A 47 50.774 14.353 9.582 1.00 33.50 C
ATOM 8 O4' G A 47 50.528 13.270 10.506 1.00 33.47 O
ATOM 9 C3' G A 47 52.218 14.771 9.809 1.00 34.85 C
ATOM 10 O3' G A 47 52.203 15.955 10.570 1.00 37.99 O
ATOM 11 C2' G A 47 52.906 13.588 10.482 1.00 34.23 C
ATOM 12 O2' G A 47 53.808 13.966 11.496 1.00 36.44 O
ATOM 13 C1' G A 47 51.721 12.929 11.174 1.00 33.41 C
ATOM 14 N9 G A 47 51.722 11.510 11.492 1.00 31.26 N
ATOM 15 C8 G A 47 52.117 10.448 10.718 1.00 31.91 C
ATOM 16 N7 G A 47 51.933 9.296 11.308 1.00 31.27 N
ATOM 17 C5 G A 47 51.407 9.628 12.552 1.00 30.56 C
ATOM 18 C6 G A 47 50.995 8.807 13.633 1.00 31.34 C
ATOM 19 O6 G A 47 51.018 7.569 13.717 1.00 32.16 O
ATOM 20 N1 G A 47 50.498 9.572 14.697 1.00 30.15 N
ATOM 21 C2 G A 47 50.401 10.940 14.706 1.00 26.83 C
ATOM 22 N2 G A 47 49.859 11.501 15.789 1.00 25.94 N
ATOM 23 N3 G A 47 50.792 11.704 13.717 1.00 28.92 N
ATOM 24 C4 G A 47 51.277 10.988 12.677 1.00 30.49 C
ATOM 25 P U A 48 52.954 17.235 10.045 1.00 41.73 P
ATOM 26 OP1 U A 48 53.058 17.081 8.559 1.00 41.63 O
ATOM 27 OP2 U A 48 54.175 17.334 10.869 1.00 43.38 O
ATOM 28 O5' U A 48 51.997 18.439 10.460 1.00 39.87 O
TER
ATOM 1 O3' U B 19 44.642 16.633 17.345 1.00 14.82 O
ATOM 2 P A B 20 45.682 15.997 18.379 1.00 15.65 P
ATOM 3 OP1 A B 20 45.216 16.428 19.709 1.00 14.33 O
ATOM 4 OP2 A B 20 47.048 16.295 17.943 1.00 15.44 O
ATOM 5 O5' A B 20 45.445 14.439 18.178 1.00 15.24 O
ATOM 6 C5' A B 20 44.211 13.803 18.550 1.00 13.53 C
ATOM 7 C4' A B 20 44.300 12.292 18.297 1.00 12.70 C
ATOM 8 O4' A B 20 44.299 12.032 16.878 1.00 13.93 O
ATOM 9 C3' A B 20 45.610 11.724 18.820 1.00 13.12 C
ATOM 10 O3' A B 20 45.420 10.462 19.457 1.00 14.06 O
ATOM 11 C2' A B 20 46.543 11.684 17.607 1.00 13.02 C
ATOM 12 O2' A B 20 47.425 10.590 17.583 1.00 12.53 O
ATOM 13 C1' A B 20 45.544 11.534 16.454 1.00 12.55 C
ATOM 14 N9 A B 20 45.906 12.201 15.209 1.00 12.31 N
ATOM 15 C8 A B 20 45.633 13.489 14.841 1.00 13.01 C
ATOM 16 N7 A B 20 46.117 13.819 13.666 1.00 16.12 N
ATOM 17 C5 A B 20 46.737 12.661 13.222 1.00 15.27 C
ATOM 18 C6 A B 20 47.416 12.343 12.024 1.00 15.95 C
ATOM 19 N6 A B 20 47.607 13.213 11.010 1.00 14.94 N
ATOM 20 N1 A B 20 47.895 11.084 11.900 1.00 16.37 N
ATOM 21 C2 A B 20 47.706 10.216 12.909 1.00 17.57 C
ATOM 22 N3 A B 20 47.086 10.398 14.078 1.00 16.34 N
ATOM 23 C4 A B 20 46.615 11.653 14.167 1.00 15.44 C
ATOM 24 P U B 21 45.278 10.371 21.058 1.00 17.57 P
ATOM 25 OP1 U B 21 46.459 11.056 21.623 1.00 15.59 O
ATOM 26 OP2 U B 21 45.073 8.928 21.307 1.00 18.33 O
ATOM 27 O5' U B 21 43.954 11.187 21.425 1.00 15.41 O
TER
ATOM 2 P G A 47 48.728 12.846 6.660 1.00 24.16 P
ATOM 3 OP1 G A 47 49.270 13.445 5.410 1.00 23.67 O
ATOM 4 OP2 G A 47 48.943 11.426 6.942 1.00 23.26 O
ATOM 5 O5' G A 47 49.205 13.690 7.911 1.00 26.62 O
ATOM 6 C5' G A 47 50.589 13.855 8.182 1.00 30.96 C
ATOM 7 C4' G A 47 50.774 14.353 9.582 1.00 33.50 C
ATOM 8 O4' G A 47 50.528 13.270 10.506 1.00 33.47 O
ATOM 9 C3' G A 47 52.218 14.771 9.809 1.00 34.85 C
ATOM 10 O3' G A 47 52.203 15.955 10.570 1.00 37.99 O
ATOM 11 C2' G A 47 52.906 13.588 10.482 1.00 34.23 C
ATOM 12 O2' G A 47 53.808 13.966 11.496 1.00 36.44 O
ATOM 13 C1' G A 47 51.721 12.929 11.174 1.00 33.41 C
ATOM 14 N9 G A 47 51.722 11.510 11.492 1.00 31.26 N
ATOM 15 C8 G A 47 52.117 10.448 10.718 1.00 31.91 C
ATOM 16 N7 G A 47 51.933 9.296 11.308 1.00 31.27 N
ATOM 17 C5 G A 47 51.407 9.628 12.552 1.00 30.56 C
ATOM 18 C6 G A 47 50.995 8.807 13.633 1.00 31.34 C
ATOM 19 O6 G A 47 51.018 7.569 13.717 1.00 32.16 O
ATOM 20 N1 G A 47 50.498 9.572 14.697 1.00 30.15 N
ATOM 21 C2 G A 47 50.401 10.940 14.706 1.00 26.83 C
ATOM 22 N2 G A 47 49.859 11.501 15.789 1.00 25.94 N
ATOM 23 N3 G A 47 50.792 11.704 13.717 1.00 28.92 N
ATOM 24 C4 G A 47 51.277 10.988 12.677 1.00 30.49 C
ATOM 25 P U A 48 52.954 17.235 10.045 1.00 41.73 P
ATOM 26 OP1 U A 48 53.058 17.081 8.559 1.00 41.63 O
ATOM 27 OP2 U A 48 54.175 17.334 10.869 1.00 43.38 O
ATOM 28 O5' U A 48 51.997 18.439 10.460 1.00 39.87 O
TER
ATOM 1 O3' U B 19 44.642 16.633 17.345 1.00 14.82 O
ATOM 2 P A B 20 45.682 15.997 18.379 1.00 15.65 P
ATOM 3 OP1 A B 20 45.216 16.428 19.709 1.00 14.33 O
ATOM 4 OP2 A B 20 47.048 16.295 17.943 1.00 15.44 O
ATOM 5 O5' A B 20 45.445 14.439 18.178 1.00 15.24 O
ATOM 6 C5' A B 20 44.211 13.803 18.550 1.00 13.53 C
ATOM 7 C4' A B 20 44.300 12.292 18.297 1.00 12.70 C
ATOM 8 O4' A B 20 44.299 12.032 16.878 1.00 13.93 O
ATOM 9 C3' A B 20 45.610 11.724 18.820 1.00 13.12 C
ATOM 10 O3' A B 20 45.420 10.462 19.457 1.00 14.06 O
ATOM 11 C2' A B 20 46.543 11.684 17.607 1.00 13.02 C
ATOM 12 O2' A B 20 47.425 10.590 17.583 1.00 12.53 O
ATOM 13 C1' A B 20 45.544 11.534 16.454 1.00 12.55 C
ATOM 14 N9 A B 20 45.906 12.201 15.209 1.00 12.31 N
ATOM 15 C8 A B 20 45.633 13.489 14.841 1.00 13.01 C
ATOM 16 N7 A B 20 46.117 13.819 13.666 1.00 16.12 N
ATOM 17 C5 A B 20 46.737 12.661 13.222 1.00 15.27 C
ATOM 18 C6 A B 20 47.416 12.343 12.024 1.00 15.95 C
ATOM 19 N6 A B 20 47.607 13.213 11.010 1.00 14.94 N
ATOM 20 N1 A B 20 47.895 11.084 11.900 1.00 16.37 N
ATOM 21 C2 A B 20 47.706 10.216 12.909 1.00 17.57 C
ATOM 22 N3 A B 20 47.086 10.398 14.078 1.00 16.34 N
ATOM 23 C4 A B 20 46.615 11.653 14.167 1.00 15.44 C
ATOM 24 P U B 21 45.278 10.371 21.058 1.00 17.57 P
ATOM 25 OP1 U B 21 46.459 11.056 21.623 1.00 15.59 O
ATOM 26 OP2 U B 21 45.073 8.928 21.307 1.00 18.33 O
ATOM 27 O5' U B 21 43.954 11.187 21.425 1.00 15.41 O
TER
Atoms:
OP1: (49.270,13.445,5.410)
OP2: (48.943,11.426,6.942)
C3': (52.218,14.771,9.809)
C1': (51.721,12.929,11.174)
C5': (50.589,13.855,8.182)
O6: (51.018,7.569,13.717)
O4': (50.528,13.270,10.506)
C8: (52.117,10.448,10.718)
C2: (50.401,10.940,14.706)
C6: (50.995,8.807,13.633)
C5: (51.407,9.628,12.552)
C4: (51.277,10.988,12.677)
P: (48.728,12.846,6.660)
C4': (50.774,14.353,9.582)
C2': (52.906,13.588,10.482)
O2': (53.808,13.966,11.496)
N1: (50.498,9.572,14.697)
N2: (49.859,11.501,15.789)
N3: (50.792,11.704,13.717)
N7: (51.933,9.296,11.308)
N9: (51.722,11.510,11.492)
O5': (49.205,13.690,7.911)
O3': (52.203,15.955,10.570)
OP2: (48.943,11.426,6.942)
C3': (52.218,14.771,9.809)
C1': (51.721,12.929,11.174)
C5': (50.589,13.855,8.182)
O6: (51.018,7.569,13.717)
O4': (50.528,13.270,10.506)
C8: (52.117,10.448,10.718)
C2: (50.401,10.940,14.706)
C6: (50.995,8.807,13.633)
C5: (51.407,9.628,12.552)
C4: (51.277,10.988,12.677)
P: (48.728,12.846,6.660)
C4': (50.774,14.353,9.582)
C2': (52.906,13.588,10.482)
O2': (53.808,13.966,11.496)
N1: (50.498,9.572,14.697)
N2: (49.859,11.501,15.789)
N3: (50.792,11.704,13.717)
N7: (51.933,9.296,11.308)
N9: (51.722,11.510,11.492)
O5': (49.205,13.690,7.911)
O3': (52.203,15.955,10.570)
OP1: (45.216,16.428,19.709)
OP2: (47.048,16.295,17.943)
C3': (45.610,11.724,18.820)
C1': (45.544,11.534,16.454)
C5': (44.211,13.803,18.550)
O4': (44.299,12.032,16.878)
C8: (45.633,13.489,14.841)
O2': (47.425,10.590,17.583)
C6: (47.416,12.343,12.024)
C5: (46.737,12.661,13.222)
C4: (46.615,11.653,14.167)
P: (45.682,15.997,18.379)
C4': (44.300,12.292,18.297)
C2': (46.543,11.684,17.607)
C2: (47.706,10.216,12.909)
N1: (47.895,11.084,11.900)
N3: (47.086,10.398,14.078)
N6: (47.607,13.213,11.010)
N7: (46.117,13.819,13.666)
N9: (45.906,12.201,15.209)
O5': (45.445,14.439,18.178)
O3': (45.420,10.462,19.457)
OP2: (47.048,16.295,17.943)
C3': (45.610,11.724,18.820)
C1': (45.544,11.534,16.454)
C5': (44.211,13.803,18.550)
O4': (44.299,12.032,16.878)
C8: (45.633,13.489,14.841)
O2': (47.425,10.590,17.583)
C6: (47.416,12.343,12.024)
C5: (46.737,12.661,13.222)
C4: (46.615,11.653,14.167)
P: (45.682,15.997,18.379)
C4': (44.300,12.292,18.297)
C2': (46.543,11.684,17.607)
C2: (47.706,10.216,12.909)
N1: (47.895,11.084,11.900)
N3: (47.086,10.398,14.078)
N6: (47.607,13.213,11.010)
N7: (46.117,13.819,13.666)
N9: (45.906,12.201,15.209)
O5': (45.445,14.439,18.178)
O3': (45.420,10.462,19.457)
Image (generated by PyMOL):