Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1XMQ:A185:A253
Extra
PDB:
ATOM 1 O3' U A 184 103.966 71.497 -30.991 1.00 51.87 O
ATOM 2 P G A 185 102.769 70.480 -30.715 1.00 53.36 P
ATOM 3 OP1 G A 185 103.037 69.209 -31.439 1.00 58.18 O
ATOM 4 OP2 G A 185 101.519 71.233 -30.984 1.00 58.18 O
ATOM 5 O5' G A 185 102.859 70.181 -29.147 1.00 53.36 O
ATOM 6 C5' G A 185 101.764 69.530 -28.472 1.00 53.36 C
ATOM 7 C4' G A 185 102.265 68.598 -27.396 1.00 53.36 C
ATOM 8 O4' G A 185 103.260 67.704 -27.951 1.00 53.36 O
ATOM 9 C3' G A 185 102.907 69.244 -26.174 1.00 53.36 C
ATOM 10 O3' G A 185 102.612 68.450 -25.032 1.00 53.36 O
ATOM 11 C2' G A 185 104.393 69.048 -26.436 1.00 53.36 C
ATOM 12 O2' G A 185 105.165 68.991 -25.258 1.00 53.36 O
ATOM 13 C1' G A 185 104.376 67.684 -27.104 1.00 53.36 C
ATOM 14 N9 G A 185 105.560 67.321 -27.865 1.00 58.18 N
ATOM 15 C8 G A 185 105.915 67.723 -29.125 1.00 58.18 C
ATOM 16 N7 G A 185 107.029 67.184 -29.534 1.00 58.18 N
ATOM 17 C5 G A 185 107.432 66.386 -28.474 1.00 58.18 C
ATOM 18 C6 G A 185 108.565 65.555 -28.332 1.00 58.18 C
ATOM 19 O6 G A 185 109.472 65.349 -29.142 1.00 58.18 O
ATOM 20 N1 G A 185 108.584 64.919 -27.094 1.00 58.18 N
ATOM 21 C2 G A 185 107.632 65.066 -26.119 1.00 58.18 C
ATOM 22 N2 G A 185 107.810 64.358 -24.995 1.00 58.18 N
ATOM 23 N3 G A 185 106.577 65.848 -26.239 1.00 58.18 N
ATOM 24 C4 G A 185 106.541 66.469 -27.437 1.00 58.18 C
ATOM 25 P G A 186 101.130 68.421 -24.428 1.00 56.61 P
ATOM 26 OP1 G A 186 101.210 67.670 -23.141 1.00 54.91 O
ATOM 27 OP2 G A 186 100.208 67.953 -25.499 1.00 54.91 O
ATOM 28 O5' G A 186 100.805 69.939 -24.090 1.00 56.61 O
TER
ATOM 1 O3' A B 252 109.381 59.941 -19.922 1.00 46.24 O
ATOM 2 P A B 253 109.897 59.902 -21.435 1.00 39.12 P
ATOM 3 OP1 A B 253 108.776 59.719 -22.404 1.00 47.07 O
ATOM 4 OP2 A B 253 111.040 58.966 -21.464 1.00 47.07 O
ATOM 5 O5' A B 253 110.447 61.375 -21.630 1.00 39.12 O
ATOM 6 C5' A B 253 109.545 62.475 -21.757 1.00 39.12 C
ATOM 7 C4' A B 253 110.312 63.728 -22.063 1.00 39.12 C
ATOM 8 O4' A B 253 111.002 64.175 -20.870 1.00 39.12 O
ATOM 9 C3' A B 253 111.390 63.588 -23.128 1.00 39.12 C
ATOM 10 O3' A B 253 110.811 63.729 -24.423 1.00 39.12 O
ATOM 11 C2' A B 253 112.357 64.711 -22.762 1.00 39.12 C
ATOM 12 O2' A B 253 111.943 65.973 -23.253 1.00 39.12 O
ATOM 13 C1' A B 253 112.249 64.735 -21.232 1.00 39.12 C
ATOM 14 N9 A B 253 113.294 63.967 -20.561 1.00 47.07 N
ATOM 15 C8 A B 253 113.440 62.605 -20.522 1.00 47.07 C
ATOM 16 N7 A B 253 114.496 62.203 -19.864 1.00 47.07 N
ATOM 17 C5 A B 253 115.079 63.379 -19.433 1.00 47.07 C
ATOM 18 C6 A B 253 116.225 63.628 -18.696 1.00 47.07 C
ATOM 19 N6 A B 253 117.022 62.668 -18.238 1.00 47.07 N
ATOM 20 N1 A B 253 116.533 64.912 -18.433 1.00 47.07 N
ATOM 21 C2 A B 253 115.721 65.872 -18.887 1.00 47.07 C
ATOM 22 N3 A B 253 114.611 65.762 -19.598 1.00 47.07 N
ATOM 23 C4 A B 253 114.344 64.473 -19.844 1.00 47.07 C
ATOM 24 P U B 254 111.686 63.425 -25.733 1.00 40.51 P
ATOM 25 OP1 U B 254 110.763 63.224 -26.881 1.00 69.98 O
ATOM 26 OP2 U B 254 112.688 62.388 -25.409 1.00 69.98 O
ATOM 27 O5' U B 254 112.491 64.772 -25.977 1.00 40.51 O
TER
ATOM 2 P G A 185 102.769 70.480 -30.715 1.00 53.36 P
ATOM 3 OP1 G A 185 103.037 69.209 -31.439 1.00 58.18 O
ATOM 4 OP2 G A 185 101.519 71.233 -30.984 1.00 58.18 O
ATOM 5 O5' G A 185 102.859 70.181 -29.147 1.00 53.36 O
ATOM 6 C5' G A 185 101.764 69.530 -28.472 1.00 53.36 C
ATOM 7 C4' G A 185 102.265 68.598 -27.396 1.00 53.36 C
ATOM 8 O4' G A 185 103.260 67.704 -27.951 1.00 53.36 O
ATOM 9 C3' G A 185 102.907 69.244 -26.174 1.00 53.36 C
ATOM 10 O3' G A 185 102.612 68.450 -25.032 1.00 53.36 O
ATOM 11 C2' G A 185 104.393 69.048 -26.436 1.00 53.36 C
ATOM 12 O2' G A 185 105.165 68.991 -25.258 1.00 53.36 O
ATOM 13 C1' G A 185 104.376 67.684 -27.104 1.00 53.36 C
ATOM 14 N9 G A 185 105.560 67.321 -27.865 1.00 58.18 N
ATOM 15 C8 G A 185 105.915 67.723 -29.125 1.00 58.18 C
ATOM 16 N7 G A 185 107.029 67.184 -29.534 1.00 58.18 N
ATOM 17 C5 G A 185 107.432 66.386 -28.474 1.00 58.18 C
ATOM 18 C6 G A 185 108.565 65.555 -28.332 1.00 58.18 C
ATOM 19 O6 G A 185 109.472 65.349 -29.142 1.00 58.18 O
ATOM 20 N1 G A 185 108.584 64.919 -27.094 1.00 58.18 N
ATOM 21 C2 G A 185 107.632 65.066 -26.119 1.00 58.18 C
ATOM 22 N2 G A 185 107.810 64.358 -24.995 1.00 58.18 N
ATOM 23 N3 G A 185 106.577 65.848 -26.239 1.00 58.18 N
ATOM 24 C4 G A 185 106.541 66.469 -27.437 1.00 58.18 C
ATOM 25 P G A 186 101.130 68.421 -24.428 1.00 56.61 P
ATOM 26 OP1 G A 186 101.210 67.670 -23.141 1.00 54.91 O
ATOM 27 OP2 G A 186 100.208 67.953 -25.499 1.00 54.91 O
ATOM 28 O5' G A 186 100.805 69.939 -24.090 1.00 56.61 O
TER
ATOM 1 O3' A B 252 109.381 59.941 -19.922 1.00 46.24 O
ATOM 2 P A B 253 109.897 59.902 -21.435 1.00 39.12 P
ATOM 3 OP1 A B 253 108.776 59.719 -22.404 1.00 47.07 O
ATOM 4 OP2 A B 253 111.040 58.966 -21.464 1.00 47.07 O
ATOM 5 O5' A B 253 110.447 61.375 -21.630 1.00 39.12 O
ATOM 6 C5' A B 253 109.545 62.475 -21.757 1.00 39.12 C
ATOM 7 C4' A B 253 110.312 63.728 -22.063 1.00 39.12 C
ATOM 8 O4' A B 253 111.002 64.175 -20.870 1.00 39.12 O
ATOM 9 C3' A B 253 111.390 63.588 -23.128 1.00 39.12 C
ATOM 10 O3' A B 253 110.811 63.729 -24.423 1.00 39.12 O
ATOM 11 C2' A B 253 112.357 64.711 -22.762 1.00 39.12 C
ATOM 12 O2' A B 253 111.943 65.973 -23.253 1.00 39.12 O
ATOM 13 C1' A B 253 112.249 64.735 -21.232 1.00 39.12 C
ATOM 14 N9 A B 253 113.294 63.967 -20.561 1.00 47.07 N
ATOM 15 C8 A B 253 113.440 62.605 -20.522 1.00 47.07 C
ATOM 16 N7 A B 253 114.496 62.203 -19.864 1.00 47.07 N
ATOM 17 C5 A B 253 115.079 63.379 -19.433 1.00 47.07 C
ATOM 18 C6 A B 253 116.225 63.628 -18.696 1.00 47.07 C
ATOM 19 N6 A B 253 117.022 62.668 -18.238 1.00 47.07 N
ATOM 20 N1 A B 253 116.533 64.912 -18.433 1.00 47.07 N
ATOM 21 C2 A B 253 115.721 65.872 -18.887 1.00 47.07 C
ATOM 22 N3 A B 253 114.611 65.762 -19.598 1.00 47.07 N
ATOM 23 C4 A B 253 114.344 64.473 -19.844 1.00 47.07 C
ATOM 24 P U B 254 111.686 63.425 -25.733 1.00 40.51 P
ATOM 25 OP1 U B 254 110.763 63.224 -26.881 1.00 69.98 O
ATOM 26 OP2 U B 254 112.688 62.388 -25.409 1.00 69.98 O
ATOM 27 O5' U B 254 112.491 64.772 -25.977 1.00 40.51 O
TER
Atoms:
OP1: (103.037,69.209,-31.439)
OP2: (101.519,71.233,-30.984)
C3': (102.907,69.244,-26.174)
C1': (104.376,67.684,-27.104)
C5': (101.764,69.530,-28.472)
O6: (109.472,65.349,-29.142)
O4': (103.260,67.704,-27.951)
C8: (105.915,67.723,-29.125)
C2: (107.632,65.066,-26.119)
C6: (108.565,65.555,-28.332)
C5: (107.432,66.386,-28.474)
C4: (106.541,66.469,-27.437)
P: (102.769,70.480,-30.715)
C4': (102.265,68.598,-27.396)
C2': (104.393,69.048,-26.436)
O2': (105.165,68.991,-25.258)
N1: (108.584,64.919,-27.094)
N2: (107.810,64.358,-24.995)
N3: (106.577,65.848,-26.239)
N7: (107.029,67.184,-29.534)
N9: (105.560,67.321,-27.865)
O5': (102.859,70.181,-29.147)
O3': (102.612,68.450,-25.032)
OP2: (101.519,71.233,-30.984)
C3': (102.907,69.244,-26.174)
C1': (104.376,67.684,-27.104)
C5': (101.764,69.530,-28.472)
O6: (109.472,65.349,-29.142)
O4': (103.260,67.704,-27.951)
C8: (105.915,67.723,-29.125)
C2: (107.632,65.066,-26.119)
C6: (108.565,65.555,-28.332)
C5: (107.432,66.386,-28.474)
C4: (106.541,66.469,-27.437)
P: (102.769,70.480,-30.715)
C4': (102.265,68.598,-27.396)
C2': (104.393,69.048,-26.436)
O2': (105.165,68.991,-25.258)
N1: (108.584,64.919,-27.094)
N2: (107.810,64.358,-24.995)
N3: (106.577,65.848,-26.239)
N7: (107.029,67.184,-29.534)
N9: (105.560,67.321,-27.865)
O5': (102.859,70.181,-29.147)
O3': (102.612,68.450,-25.032)
OP1: (108.776,59.719,-22.404)
OP2: (111.040,58.966,-21.464)
C3': (111.390,63.588,-23.128)
C1': (112.249,64.735,-21.232)
C5': (109.545,62.475,-21.757)
O4': (111.002,64.175,-20.870)
C8: (113.440,62.605,-20.522)
O2': (111.943,65.973,-23.253)
C6: (116.225,63.628,-18.696)
C5: (115.079,63.379,-19.433)
C4: (114.344,64.473,-19.844)
P: (109.897,59.902,-21.435)
C4': (110.312,63.728,-22.063)
C2': (112.357,64.711,-22.762)
C2: (115.721,65.872,-18.887)
N1: (116.533,64.912,-18.433)
N3: (114.611,65.762,-19.598)
N6: (117.022,62.668,-18.238)
N7: (114.496,62.203,-19.864)
N9: (113.294,63.967,-20.561)
O5': (110.447,61.375,-21.630)
O3': (110.811,63.729,-24.423)
OP2: (111.040,58.966,-21.464)
C3': (111.390,63.588,-23.128)
C1': (112.249,64.735,-21.232)
C5': (109.545,62.475,-21.757)
O4': (111.002,64.175,-20.870)
C8: (113.440,62.605,-20.522)
O2': (111.943,65.973,-23.253)
C6: (116.225,63.628,-18.696)
C5: (115.079,63.379,-19.433)
C4: (114.344,64.473,-19.844)
P: (109.897,59.902,-21.435)
C4': (110.312,63.728,-22.063)
C2': (112.357,64.711,-22.762)
C2: (115.721,65.872,-18.887)
N1: (116.533,64.912,-18.433)
N3: (114.611,65.762,-19.598)
N6: (117.022,62.668,-18.238)
N7: (114.496,62.203,-19.864)
N9: (113.294,63.967,-20.561)
O5': (110.447,61.375,-21.630)
O3': (110.811,63.729,-24.423)
Image (generated by PyMOL):