Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2J00:A508:Y10
Extra
PDB:
ATOM 1 O3' G A 507 -61.458 74.847 88.702 1.00 8.41 O
ATOM 2 P G A 508 -62.082 76.178 88.069 1.00 40.28 P
ATOM 3 OP1 G A 508 -63.438 75.837 87.586 1.00 16.80 O
ATOM 4 OP2 G A 508 -61.066 76.699 87.114 1.00 16.11 O
ATOM 5 O5' G A 508 -62.233 77.180 89.301 1.00 40.00 O
ATOM 6 C5' G A 508 -62.971 76.798 90.490 1.00 44.30 C
ATOM 7 C4' G A 508 -63.848 77.944 90.965 1.00 48.37 C
ATOM 8 O4' G A 508 -63.037 79.020 91.516 1.00 49.48 O
ATOM 9 C3' G A 508 -64.728 78.568 89.891 1.00 50.78 C
ATOM 10 O3' G A 508 -66.002 78.884 90.440 1.00 53.90 O
ATOM 11 C2' G A 508 -63.975 79.842 89.515 1.00 50.90 C
ATOM 12 O2' G A 508 -64.813 80.866 89.019 1.00 51.72 O
ATOM 13 C1' G A 508 -63.333 80.235 90.846 1.00 50.93 C
ATOM 14 N9 G A 508 -62.093 81.005 90.723 1.00 24.28 N
ATOM 15 C8 G A 508 -61.154 80.910 89.725 1.00 25.04 C
ATOM 16 N7 G A 508 -60.124 81.692 89.909 1.00 26.28 N
ATOM 17 C5 G A 508 -60.399 82.351 91.096 1.00 26.57 C
ATOM 18 C6 G A 508 -59.636 83.311 91.811 1.00 27.74 C
ATOM 19 O6 G A 508 -58.529 83.786 91.527 1.00 29.24 O
ATOM 20 N1 G A 508 -60.285 83.716 92.968 1.00 27.12 N
ATOM 21 C2 G A 508 -61.508 83.266 93.381 1.00 26.45 C
ATOM 22 N2 G A 508 -61.968 83.785 94.515 1.00 25.49 N
ATOM 23 N3 G A 508 -62.228 82.374 92.730 1.00 26.00 N
ATOM 24 C4 G A 508 -61.617 81.956 91.605 1.00 25.47 C
ATOM 25 P U A 509 -67.318 78.744 89.527 1.00 38.89 P
ATOM 26 OP1 U A 509 -66.924 79.076 88.129 1.00 65.31 O
ATOM 27 OP2 U A 509 -68.422 79.490 90.177 1.00 66.02 O
ATOM 28 O5' U A 509 -67.694 77.197 89.613 1.00 37.94 O
TER
ATOM 1 O3' A B 9 -67.538 83.079 93.439 1.00 33.86 O
ATOM 2 P A B 10 -67.854 83.784 94.848 1.00 80.51 P
ATOM 3 OP1 A B 10 -67.289 82.887 95.890 1.00 33.24 O
ATOM 4 OP2 A B 10 -69.288 84.180 94.922 1.00 33.24 O
ATOM 5 O5' A B 10 -66.971 85.104 94.784 1.00 20.61 O
ATOM 6 C5' A B 10 -66.473 85.725 95.978 1.00 20.61 C
ATOM 7 C4' A B 10 -64.959 85.710 95.994 1.00 20.61 C
ATOM 8 O4' A B 10 -64.438 86.041 94.682 1.00 20.61 O
ATOM 9 C3' A B 10 -64.360 86.739 96.928 1.00 20.61 C
ATOM 10 O3' A B 10 -64.308 86.232 98.255 1.00 20.61 O
ATOM 11 C2' A B 10 -62.998 87.026 96.295 1.00 20.61 C
ATOM 12 O2' A B 10 -61.995 86.080 96.622 1.00 20.61 O
ATOM 13 C1' A B 10 -63.315 86.900 94.803 1.00 20.61 C
ATOM 14 N9 A B 10 -63.651 88.164 94.134 1.00 18.00 N
ATOM 15 C8 A B 10 -64.831 88.452 93.489 1.00 18.00 C
ATOM 16 N7 A B 10 -64.882 89.659 92.988 1.00 18.00 N
ATOM 17 C5 A B 10 -63.653 90.208 93.319 1.00 18.00 C
ATOM 18 C6 A B 10 -63.104 91.465 93.088 1.00 18.00 C
ATOM 19 N6 A B 10 -63.745 92.425 92.436 1.00 18.00 N
ATOM 20 N1 A B 10 -61.868 91.712 93.554 1.00 18.00 N
ATOM 21 C2 A B 10 -61.238 90.747 94.209 1.00 18.00 C
ATOM 22 N3 A B 10 -61.645 89.513 94.492 1.00 18.00 N
ATOM 23 C4 A B 10 -62.881 89.301 94.017 1.00 18.00 C
ATOM 24 P A B 11 -64.714 87.185 99.483 1.00 57.13 P
ATOM 25 OP1 A B 11 -64.367 86.478 100.747 1.00 57.33 O
ATOM 26 OP2 A B 11 -66.104 87.659 99.271 1.00 57.33 O
ATOM 27 O5' A B 11 -63.745 88.440 99.311 1.00 36.23 O
TER
ATOM 2 P G A 508 -62.082 76.178 88.069 1.00 40.28 P
ATOM 3 OP1 G A 508 -63.438 75.837 87.586 1.00 16.80 O
ATOM 4 OP2 G A 508 -61.066 76.699 87.114 1.00 16.11 O
ATOM 5 O5' G A 508 -62.233 77.180 89.301 1.00 40.00 O
ATOM 6 C5' G A 508 -62.971 76.798 90.490 1.00 44.30 C
ATOM 7 C4' G A 508 -63.848 77.944 90.965 1.00 48.37 C
ATOM 8 O4' G A 508 -63.037 79.020 91.516 1.00 49.48 O
ATOM 9 C3' G A 508 -64.728 78.568 89.891 1.00 50.78 C
ATOM 10 O3' G A 508 -66.002 78.884 90.440 1.00 53.90 O
ATOM 11 C2' G A 508 -63.975 79.842 89.515 1.00 50.90 C
ATOM 12 O2' G A 508 -64.813 80.866 89.019 1.00 51.72 O
ATOM 13 C1' G A 508 -63.333 80.235 90.846 1.00 50.93 C
ATOM 14 N9 G A 508 -62.093 81.005 90.723 1.00 24.28 N
ATOM 15 C8 G A 508 -61.154 80.910 89.725 1.00 25.04 C
ATOM 16 N7 G A 508 -60.124 81.692 89.909 1.00 26.28 N
ATOM 17 C5 G A 508 -60.399 82.351 91.096 1.00 26.57 C
ATOM 18 C6 G A 508 -59.636 83.311 91.811 1.00 27.74 C
ATOM 19 O6 G A 508 -58.529 83.786 91.527 1.00 29.24 O
ATOM 20 N1 G A 508 -60.285 83.716 92.968 1.00 27.12 N
ATOM 21 C2 G A 508 -61.508 83.266 93.381 1.00 26.45 C
ATOM 22 N2 G A 508 -61.968 83.785 94.515 1.00 25.49 N
ATOM 23 N3 G A 508 -62.228 82.374 92.730 1.00 26.00 N
ATOM 24 C4 G A 508 -61.617 81.956 91.605 1.00 25.47 C
ATOM 25 P U A 509 -67.318 78.744 89.527 1.00 38.89 P
ATOM 26 OP1 U A 509 -66.924 79.076 88.129 1.00 65.31 O
ATOM 27 OP2 U A 509 -68.422 79.490 90.177 1.00 66.02 O
ATOM 28 O5' U A 509 -67.694 77.197 89.613 1.00 37.94 O
TER
ATOM 1 O3' A B 9 -67.538 83.079 93.439 1.00 33.86 O
ATOM 2 P A B 10 -67.854 83.784 94.848 1.00 80.51 P
ATOM 3 OP1 A B 10 -67.289 82.887 95.890 1.00 33.24 O
ATOM 4 OP2 A B 10 -69.288 84.180 94.922 1.00 33.24 O
ATOM 5 O5' A B 10 -66.971 85.104 94.784 1.00 20.61 O
ATOM 6 C5' A B 10 -66.473 85.725 95.978 1.00 20.61 C
ATOM 7 C4' A B 10 -64.959 85.710 95.994 1.00 20.61 C
ATOM 8 O4' A B 10 -64.438 86.041 94.682 1.00 20.61 O
ATOM 9 C3' A B 10 -64.360 86.739 96.928 1.00 20.61 C
ATOM 10 O3' A B 10 -64.308 86.232 98.255 1.00 20.61 O
ATOM 11 C2' A B 10 -62.998 87.026 96.295 1.00 20.61 C
ATOM 12 O2' A B 10 -61.995 86.080 96.622 1.00 20.61 O
ATOM 13 C1' A B 10 -63.315 86.900 94.803 1.00 20.61 C
ATOM 14 N9 A B 10 -63.651 88.164 94.134 1.00 18.00 N
ATOM 15 C8 A B 10 -64.831 88.452 93.489 1.00 18.00 C
ATOM 16 N7 A B 10 -64.882 89.659 92.988 1.00 18.00 N
ATOM 17 C5 A B 10 -63.653 90.208 93.319 1.00 18.00 C
ATOM 18 C6 A B 10 -63.104 91.465 93.088 1.00 18.00 C
ATOM 19 N6 A B 10 -63.745 92.425 92.436 1.00 18.00 N
ATOM 20 N1 A B 10 -61.868 91.712 93.554 1.00 18.00 N
ATOM 21 C2 A B 10 -61.238 90.747 94.209 1.00 18.00 C
ATOM 22 N3 A B 10 -61.645 89.513 94.492 1.00 18.00 N
ATOM 23 C4 A B 10 -62.881 89.301 94.017 1.00 18.00 C
ATOM 24 P A B 11 -64.714 87.185 99.483 1.00 57.13 P
ATOM 25 OP1 A B 11 -64.367 86.478 100.747 1.00 57.33 O
ATOM 26 OP2 A B 11 -66.104 87.659 99.271 1.00 57.33 O
ATOM 27 O5' A B 11 -63.745 88.440 99.311 1.00 36.23 O
TER
Atoms:
OP1: (-63.438,75.837,87.586)
OP2: (-61.066,76.699,87.114)
C3': (-64.728,78.568,89.891)
C1': (-63.333,80.235,90.846)
C5': (-62.971,76.798,90.490)
O6: (-58.529,83.786,91.527)
O4': (-63.037,79.020,91.516)
C8: (-61.154,80.910,89.725)
C2: (-61.508,83.266,93.381)
C6: (-59.636,83.311,91.811)
C5: (-60.399,82.351,91.096)
C4: (-61.617,81.956,91.605)
P: (-62.082,76.178,88.069)
C4': (-63.848,77.944,90.965)
C2': (-63.975,79.842,89.515)
O2': (-64.813,80.866,89.019)
N1: (-60.285,83.716,92.968)
N2: (-61.968,83.785,94.515)
N3: (-62.228,82.374,92.730)
N7: (-60.124,81.692,89.909)
N9: (-62.093,81.005,90.723)
O5': (-62.233,77.180,89.301)
O3': (-66.002,78.884,90.440)
OP2: (-61.066,76.699,87.114)
C3': (-64.728,78.568,89.891)
C1': (-63.333,80.235,90.846)
C5': (-62.971,76.798,90.490)
O6: (-58.529,83.786,91.527)
O4': (-63.037,79.020,91.516)
C8: (-61.154,80.910,89.725)
C2: (-61.508,83.266,93.381)
C6: (-59.636,83.311,91.811)
C5: (-60.399,82.351,91.096)
C4: (-61.617,81.956,91.605)
P: (-62.082,76.178,88.069)
C4': (-63.848,77.944,90.965)
C2': (-63.975,79.842,89.515)
O2': (-64.813,80.866,89.019)
N1: (-60.285,83.716,92.968)
N2: (-61.968,83.785,94.515)
N3: (-62.228,82.374,92.730)
N7: (-60.124,81.692,89.909)
N9: (-62.093,81.005,90.723)
O5': (-62.233,77.180,89.301)
O3': (-66.002,78.884,90.440)
OP1: (-67.289,82.887,95.890)
OP2: (-69.288,84.180,94.922)
C3': (-64.360,86.739,96.928)
C1': (-63.315,86.900,94.803)
C5': (-66.473,85.725,95.978)
O4': (-64.438,86.041,94.682)
C8: (-64.831,88.452,93.489)
O2': (-61.995,86.080,96.622)
C6: (-63.104,91.465,93.088)
C5: (-63.653,90.208,93.319)
C4: (-62.881,89.301,94.017)
P: (-67.854,83.784,94.848)
C4': (-64.959,85.710,95.994)
C2': (-62.998,87.026,96.295)
C2: (-61.238,90.747,94.209)
N1: (-61.868,91.712,93.554)
N3: (-61.645,89.513,94.492)
N6: (-63.745,92.425,92.436)
N7: (-64.882,89.659,92.988)
N9: (-63.651,88.164,94.134)
O5': (-66.971,85.104,94.784)
O3': (-64.308,86.232,98.255)
OP2: (-69.288,84.180,94.922)
C3': (-64.360,86.739,96.928)
C1': (-63.315,86.900,94.803)
C5': (-66.473,85.725,95.978)
O4': (-64.438,86.041,94.682)
C8: (-64.831,88.452,93.489)
O2': (-61.995,86.080,96.622)
C6: (-63.104,91.465,93.088)
C5: (-63.653,90.208,93.319)
C4: (-62.881,89.301,94.017)
P: (-67.854,83.784,94.848)
C4': (-64.959,85.710,95.994)
C2': (-62.998,87.026,96.295)
C2: (-61.238,90.747,94.209)
N1: (-61.868,91.712,93.554)
N3: (-61.645,89.513,94.492)
N6: (-63.745,92.425,92.436)
N7: (-64.882,89.659,92.988)
N9: (-63.651,88.164,94.134)
O5': (-66.971,85.104,94.784)
O3': (-64.308,86.232,98.255)
Image (generated by PyMOL):