Doublet info:
Details
Nucleotide types:
AG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1NJI:A235:A252
Extra
PDB:
ATOM 1 O3' G A 234 93.817 117.941 -7.895 1.00 54.27 O
ATOM 2 P A A 235 94.494 118.969 -8.916 1.00 53.69 P
ATOM 3 OP1 A A 235 94.134 118.474 -10.261 1.00 54.00 O
ATOM 4 OP2 A A 235 95.928 119.196 -8.571 1.00 50.98 O
ATOM 5 O5' A A 235 93.689 120.314 -8.669 1.00 51.69 O
ATOM 6 C5' A A 235 92.320 120.429 -9.057 1.00 50.30 C
ATOM 7 C4' A A 235 91.687 121.566 -8.316 1.00 50.05 C
ATOM 8 O4' A A 235 91.606 121.225 -6.906 1.00 50.58 O
ATOM 9 C3' A A 235 92.509 122.848 -8.378 1.00 49.35 C
ATOM 10 O3' A A 235 91.648 123.957 -8.207 1.00 48.95 O
ATOM 11 C2' A A 235 93.375 122.735 -7.137 1.00 49.09 C
ATOM 12 O2' A A 235 93.868 123.981 -6.698 1.00 47.64 O
ATOM 13 C1' A A 235 92.353 122.165 -6.159 1.00 50.46 C
ATOM 14 N9 A A 235 92.927 121.498 -5.000 1.00 50.66 N
ATOM 15 C8 A A 235 93.635 120.324 -4.935 1.00 51.04 C
ATOM 16 N7 A A 235 94.011 120.004 -3.723 1.00 50.72 N
ATOM 17 C5 A A 235 93.513 121.035 -2.939 1.00 50.63 C
ATOM 18 C6 A A 235 93.572 121.283 -1.568 1.00 50.34 C
ATOM 19 N6 A A 235 94.176 120.476 -0.701 1.00 49.80 N
ATOM 20 N1 A A 235 92.979 122.405 -1.108 1.00 50.65 N
ATOM 21 C2 A A 235 92.369 123.214 -1.982 1.00 50.78 C
ATOM 22 N3 A A 235 92.244 123.086 -3.292 1.00 50.78 N
ATOM 23 C4 A A 235 92.846 121.961 -3.714 1.00 50.57 C
ATOM 24 P A A 236 91.065 124.697 -9.489 1.00 50.06 P
ATOM 25 OP1 A A 236 92.122 124.579 -10.523 1.00 50.02 O
ATOM 26 OP2 A A 236 90.539 126.034 -9.105 1.00 49.39 O
ATOM 27 O5' A A 236 89.812 123.817 -9.906 1.00 48.37 O
TER
ATOM 1 O3' U B 251 96.584 118.702 6.871 1.00 35.91 O
ATOM 2 P G B 252 95.308 117.935 6.268 1.00 36.70 P
ATOM 3 OP1 G B 252 94.085 118.319 7.014 1.00 36.41 O
ATOM 4 OP2 G B 252 95.679 116.515 6.139 1.00 35.70 O
ATOM 5 O5' G B 252 95.153 118.558 4.820 1.00 36.02 O
ATOM 6 C5' G B 252 94.734 119.921 4.664 1.00 37.01 C
ATOM 7 C4' G B 252 93.687 120.003 3.596 1.00 37.70 C
ATOM 8 O4' G B 252 94.302 119.688 2.318 1.00 38.21 O
ATOM 9 C3' G B 252 92.535 119.022 3.778 1.00 39.19 C
ATOM 10 O3' G B 252 91.283 119.546 3.341 1.00 41.49 O
ATOM 11 C2' G B 252 92.990 117.804 2.977 1.00 38.56 C
ATOM 12 O2' G B 252 91.901 117.045 2.475 1.00 37.64 O
ATOM 13 C1' G B 252 93.854 118.422 1.864 1.00 37.95 C
ATOM 14 N9 G B 252 95.032 117.604 1.560 1.00 37.79 N
ATOM 15 C8 G B 252 95.826 116.942 2.470 1.00 36.37 C
ATOM 16 N7 G B 252 96.760 116.225 1.913 1.00 38.11 N
ATOM 17 C5 G B 252 96.592 116.430 0.548 1.00 38.75 C
ATOM 18 C6 G B 252 97.305 115.880 -0.566 1.00 39.39 C
ATOM 19 O6 G B 252 98.238 115.051 -0.561 1.00 37.69 O
ATOM 20 N1 G B 252 96.824 116.380 -1.772 1.00 39.25 N
ATOM 21 C2 G B 252 95.796 117.279 -1.902 1.00 37.35 C
ATOM 22 N2 G B 252 95.519 117.670 -3.157 1.00 37.49 N
ATOM 23 N3 G B 252 95.100 117.767 -0.883 1.00 37.96 N
ATOM 24 C4 G B 252 95.550 117.304 0.307 1.00 37.82 C
ATOM 25 P U B 253 89.993 119.390 4.291 1.00 41.65 P
ATOM 26 OP1 U B 253 90.344 119.953 5.611 1.00 42.04 O
ATOM 27 OP2 U B 253 89.483 118.000 4.201 1.00 42.43 O
ATOM 28 O5' U B 253 88.917 120.343 3.626 1.00 40.47 O
TER
ATOM 2 P A A 235 94.494 118.969 -8.916 1.00 53.69 P
ATOM 3 OP1 A A 235 94.134 118.474 -10.261 1.00 54.00 O
ATOM 4 OP2 A A 235 95.928 119.196 -8.571 1.00 50.98 O
ATOM 5 O5' A A 235 93.689 120.314 -8.669 1.00 51.69 O
ATOM 6 C5' A A 235 92.320 120.429 -9.057 1.00 50.30 C
ATOM 7 C4' A A 235 91.687 121.566 -8.316 1.00 50.05 C
ATOM 8 O4' A A 235 91.606 121.225 -6.906 1.00 50.58 O
ATOM 9 C3' A A 235 92.509 122.848 -8.378 1.00 49.35 C
ATOM 10 O3' A A 235 91.648 123.957 -8.207 1.00 48.95 O
ATOM 11 C2' A A 235 93.375 122.735 -7.137 1.00 49.09 C
ATOM 12 O2' A A 235 93.868 123.981 -6.698 1.00 47.64 O
ATOM 13 C1' A A 235 92.353 122.165 -6.159 1.00 50.46 C
ATOM 14 N9 A A 235 92.927 121.498 -5.000 1.00 50.66 N
ATOM 15 C8 A A 235 93.635 120.324 -4.935 1.00 51.04 C
ATOM 16 N7 A A 235 94.011 120.004 -3.723 1.00 50.72 N
ATOM 17 C5 A A 235 93.513 121.035 -2.939 1.00 50.63 C
ATOM 18 C6 A A 235 93.572 121.283 -1.568 1.00 50.34 C
ATOM 19 N6 A A 235 94.176 120.476 -0.701 1.00 49.80 N
ATOM 20 N1 A A 235 92.979 122.405 -1.108 1.00 50.65 N
ATOM 21 C2 A A 235 92.369 123.214 -1.982 1.00 50.78 C
ATOM 22 N3 A A 235 92.244 123.086 -3.292 1.00 50.78 N
ATOM 23 C4 A A 235 92.846 121.961 -3.714 1.00 50.57 C
ATOM 24 P A A 236 91.065 124.697 -9.489 1.00 50.06 P
ATOM 25 OP1 A A 236 92.122 124.579 -10.523 1.00 50.02 O
ATOM 26 OP2 A A 236 90.539 126.034 -9.105 1.00 49.39 O
ATOM 27 O5' A A 236 89.812 123.817 -9.906 1.00 48.37 O
TER
ATOM 1 O3' U B 251 96.584 118.702 6.871 1.00 35.91 O
ATOM 2 P G B 252 95.308 117.935 6.268 1.00 36.70 P
ATOM 3 OP1 G B 252 94.085 118.319 7.014 1.00 36.41 O
ATOM 4 OP2 G B 252 95.679 116.515 6.139 1.00 35.70 O
ATOM 5 O5' G B 252 95.153 118.558 4.820 1.00 36.02 O
ATOM 6 C5' G B 252 94.734 119.921 4.664 1.00 37.01 C
ATOM 7 C4' G B 252 93.687 120.003 3.596 1.00 37.70 C
ATOM 8 O4' G B 252 94.302 119.688 2.318 1.00 38.21 O
ATOM 9 C3' G B 252 92.535 119.022 3.778 1.00 39.19 C
ATOM 10 O3' G B 252 91.283 119.546 3.341 1.00 41.49 O
ATOM 11 C2' G B 252 92.990 117.804 2.977 1.00 38.56 C
ATOM 12 O2' G B 252 91.901 117.045 2.475 1.00 37.64 O
ATOM 13 C1' G B 252 93.854 118.422 1.864 1.00 37.95 C
ATOM 14 N9 G B 252 95.032 117.604 1.560 1.00 37.79 N
ATOM 15 C8 G B 252 95.826 116.942 2.470 1.00 36.37 C
ATOM 16 N7 G B 252 96.760 116.225 1.913 1.00 38.11 N
ATOM 17 C5 G B 252 96.592 116.430 0.548 1.00 38.75 C
ATOM 18 C6 G B 252 97.305 115.880 -0.566 1.00 39.39 C
ATOM 19 O6 G B 252 98.238 115.051 -0.561 1.00 37.69 O
ATOM 20 N1 G B 252 96.824 116.380 -1.772 1.00 39.25 N
ATOM 21 C2 G B 252 95.796 117.279 -1.902 1.00 37.35 C
ATOM 22 N2 G B 252 95.519 117.670 -3.157 1.00 37.49 N
ATOM 23 N3 G B 252 95.100 117.767 -0.883 1.00 37.96 N
ATOM 24 C4 G B 252 95.550 117.304 0.307 1.00 37.82 C
ATOM 25 P U B 253 89.993 119.390 4.291 1.00 41.65 P
ATOM 26 OP1 U B 253 90.344 119.953 5.611 1.00 42.04 O
ATOM 27 OP2 U B 253 89.483 118.000 4.201 1.00 42.43 O
ATOM 28 O5' U B 253 88.917 120.343 3.626 1.00 40.47 O
TER
Atoms:
OP1: (94.134,118.474,-10.261)
OP2: (95.928,119.196,-8.571)
C3': (92.509,122.848,-8.378)
C1': (92.353,122.165,-6.159)
C5': (92.320,120.429,-9.057)
O4': (91.606,121.225,-6.906)
C8: (93.635,120.324,-4.935)
O2': (93.868,123.981,-6.698)
C6: (93.572,121.283,-1.568)
C5: (93.513,121.035,-2.939)
C4: (92.846,121.961,-3.714)
P: (94.494,118.969,-8.916)
C4': (91.687,121.566,-8.316)
C2': (93.375,122.735,-7.137)
C2: (92.369,123.214,-1.982)
N1: (92.979,122.405,-1.108)
N3: (92.244,123.086,-3.292)
N6: (94.176,120.476,-0.701)
N7: (94.011,120.004,-3.723)
N9: (92.927,121.498,-5.000)
O5': (93.689,120.314,-8.669)
O3': (91.648,123.957,-8.207)
OP2: (95.928,119.196,-8.571)
C3': (92.509,122.848,-8.378)
C1': (92.353,122.165,-6.159)
C5': (92.320,120.429,-9.057)
O4': (91.606,121.225,-6.906)
C8: (93.635,120.324,-4.935)
O2': (93.868,123.981,-6.698)
C6: (93.572,121.283,-1.568)
C5: (93.513,121.035,-2.939)
C4: (92.846,121.961,-3.714)
P: (94.494,118.969,-8.916)
C4': (91.687,121.566,-8.316)
C2': (93.375,122.735,-7.137)
C2: (92.369,123.214,-1.982)
N1: (92.979,122.405,-1.108)
N3: (92.244,123.086,-3.292)
N6: (94.176,120.476,-0.701)
N7: (94.011,120.004,-3.723)
N9: (92.927,121.498,-5.000)
O5': (93.689,120.314,-8.669)
O3': (91.648,123.957,-8.207)
OP1: (94.085,118.319,7.014)
OP2: (95.679,116.515,6.139)
C3': (92.535,119.022,3.778)
C1': (93.854,118.422,1.864)
C5': (94.734,119.921,4.664)
O6: (98.238,115.051,-0.561)
O4': (94.302,119.688,2.318)
C8: (95.826,116.942,2.470)
C2: (95.796,117.279,-1.902)
C6: (97.305,115.880,-0.566)
C5: (96.592,116.430,0.548)
C4: (95.550,117.304,0.307)
P: (95.308,117.935,6.268)
C4': (93.687,120.003,3.596)
C2': (92.990,117.804,2.977)
O2': (91.901,117.045,2.475)
N1: (96.824,116.380,-1.772)
N2: (95.519,117.670,-3.157)
N3: (95.100,117.767,-0.883)
N7: (96.760,116.225,1.913)
N9: (95.032,117.604,1.560)
O5': (95.153,118.558,4.820)
O3': (91.283,119.546,3.341)
OP2: (95.679,116.515,6.139)
C3': (92.535,119.022,3.778)
C1': (93.854,118.422,1.864)
C5': (94.734,119.921,4.664)
O6: (98.238,115.051,-0.561)
O4': (94.302,119.688,2.318)
C8: (95.826,116.942,2.470)
C2: (95.796,117.279,-1.902)
C6: (97.305,115.880,-0.566)
C5: (96.592,116.430,0.548)
C4: (95.550,117.304,0.307)
P: (95.308,117.935,6.268)
C4': (93.687,120.003,3.596)
C2': (92.990,117.804,2.977)
O2': (91.901,117.045,2.475)
N1: (96.824,116.380,-1.772)
N2: (95.519,117.670,-3.157)
N3: (95.100,117.767,-0.883)
N7: (96.760,116.225,1.913)
N9: (95.032,117.604,1.560)
O5': (95.153,118.558,4.820)
O3': (91.283,119.546,3.341)
Image (generated by PyMOL):