Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2VQF:A185:A253
Extra
PDB:
ATOM 1 O3' U A 184 105.030 71.849 -30.933 1.00 73.08 O
ATOM 2 P G A 185 103.801 70.842 -30.724 1.00 73.84 P
ATOM 3 OP1 G A 185 104.120 69.557 -31.426 1.00 72.78 O
ATOM 4 OP2 G A 185 102.598 71.610 -31.099 1.00 75.98 O
ATOM 5 O5' G A 185 103.775 70.571 -29.149 1.00 73.33 O
ATOM 6 C5' G A 185 102.639 69.935 -28.533 1.00 72.33 C
ATOM 7 C4' G A 185 103.090 68.914 -27.515 1.00 71.56 C
ATOM 8 O4' G A 185 104.076 68.048 -28.134 1.00 71.37 O
ATOM 9 C3' G A 185 103.731 69.442 -26.228 1.00 71.50 C
ATOM 10 O3' G A 185 103.408 68.559 -25.167 1.00 71.97 O
ATOM 11 C2' G A 185 105.223 69.239 -26.481 1.00 71.27 C
ATOM 12 O2' G A 185 105.978 69.015 -25.309 1.00 71.04 O
ATOM 13 C1' G A 185 105.189 67.948 -27.279 1.00 71.19 C
ATOM 14 N9 G A 185 106.381 67.583 -28.037 1.00 70.69 N
ATOM 15 C8 G A 185 106.699 67.895 -29.338 1.00 71.75 C
ATOM 16 N7 G A 185 107.805 67.329 -29.743 1.00 71.43 N
ATOM 17 C5 G A 185 108.250 66.619 -28.636 1.00 70.20 C
ATOM 18 C6 G A 185 109.379 65.790 -28.475 1.00 69.99 C
ATOM 19 O6 G A 185 110.246 65.500 -29.308 1.00 71.36 O
ATOM 20 N1 G A 185 109.444 65.265 -27.188 1.00 68.80 N
ATOM 21 C2 G A 185 108.535 65.506 -26.188 1.00 67.34 C
ATOM 22 N2 G A 185 108.761 64.907 -25.016 1.00 66.49 N
ATOM 23 N3 G A 185 107.480 66.276 -26.328 1.00 67.53 N
ATOM 24 C4 G A 185 107.396 66.791 -27.570 1.00 69.69 C
ATOM 25 P G A 186 102.006 68.681 -24.398 1.00 73.00 P
ATOM 26 OP1 G A 186 102.282 68.072 -23.057 1.00 73.40 O
ATOM 27 OP2 G A 186 100.940 68.118 -25.266 1.00 72.53 O
ATOM 28 O5' G A 186 101.768 70.241 -24.204 1.00 73.44 O
TER
ATOM 1 O3' A B 252 110.169 60.360 -19.827 1.00 67.54 O
ATOM 2 P A B 253 110.716 60.216 -21.326 1.00 69.40 P
ATOM 3 OP1 A B 253 109.563 59.983 -22.252 1.00 69.78 O
ATOM 4 OP2 A B 253 111.850 59.267 -21.302 1.00 69.63 O
ATOM 5 O5' A B 253 111.264 61.651 -21.638 1.00 68.13 O
ATOM 6 C5' A B 253 110.370 62.770 -21.717 1.00 65.95 C
ATOM 7 C4' A B 253 111.156 64.042 -21.882 1.00 63.81 C
ATOM 8 O4' A B 253 111.788 64.407 -20.631 1.00 63.43 O
ATOM 9 C3' A B 253 112.283 63.959 -22.892 1.00 62.07 C
ATOM 10 O3' A B 253 111.762 64.207 -24.187 1.00 62.23 O
ATOM 11 C2' A B 253 113.235 65.044 -22.408 1.00 61.04 C
ATOM 12 O2' A B 253 112.811 66.315 -22.831 1.00 62.00 O
ATOM 13 C1' A B 253 113.053 64.979 -20.889 1.00 61.31 C
ATOM 14 N9 A B 253 114.067 64.162 -20.224 1.00 60.79 N
ATOM 15 C8 A B 253 114.140 62.795 -20.188 1.00 61.57 C
ATOM 16 N7 A B 253 115.205 62.339 -19.578 1.00 60.03 N
ATOM 17 C5 A B 253 115.867 63.483 -19.173 1.00 57.53 C
ATOM 18 C6 A B 253 117.067 63.673 -18.509 1.00 56.45 C
ATOM 19 N6 A B 253 117.863 62.679 -18.132 1.00 55.79 N
ATOM 20 N1 A B 253 117.444 64.936 -18.245 1.00 57.02 N
ATOM 21 C2 A B 253 116.663 65.934 -18.644 1.00 57.16 C
ATOM 22 N3 A B 253 115.515 65.884 -19.297 1.00 60.18 N
ATOM 23 C4 A B 253 115.167 64.611 -19.538 1.00 59.14 C
ATOM 24 P U B 254 112.596 63.770 -25.487 1.00 64.11 P
ATOM 25 OP1 U B 254 111.631 63.563 -26.607 1.00 62.50 O
ATOM 26 OP2 U B 254 113.512 62.681 -25.083 1.00 64.57 O
ATOM 27 O5' U B 254 113.458 65.068 -25.847 1.00 64.84 O
TER
ATOM 2 P G A 185 103.801 70.842 -30.724 1.00 73.84 P
ATOM 3 OP1 G A 185 104.120 69.557 -31.426 1.00 72.78 O
ATOM 4 OP2 G A 185 102.598 71.610 -31.099 1.00 75.98 O
ATOM 5 O5' G A 185 103.775 70.571 -29.149 1.00 73.33 O
ATOM 6 C5' G A 185 102.639 69.935 -28.533 1.00 72.33 C
ATOM 7 C4' G A 185 103.090 68.914 -27.515 1.00 71.56 C
ATOM 8 O4' G A 185 104.076 68.048 -28.134 1.00 71.37 O
ATOM 9 C3' G A 185 103.731 69.442 -26.228 1.00 71.50 C
ATOM 10 O3' G A 185 103.408 68.559 -25.167 1.00 71.97 O
ATOM 11 C2' G A 185 105.223 69.239 -26.481 1.00 71.27 C
ATOM 12 O2' G A 185 105.978 69.015 -25.309 1.00 71.04 O
ATOM 13 C1' G A 185 105.189 67.948 -27.279 1.00 71.19 C
ATOM 14 N9 G A 185 106.381 67.583 -28.037 1.00 70.69 N
ATOM 15 C8 G A 185 106.699 67.895 -29.338 1.00 71.75 C
ATOM 16 N7 G A 185 107.805 67.329 -29.743 1.00 71.43 N
ATOM 17 C5 G A 185 108.250 66.619 -28.636 1.00 70.20 C
ATOM 18 C6 G A 185 109.379 65.790 -28.475 1.00 69.99 C
ATOM 19 O6 G A 185 110.246 65.500 -29.308 1.00 71.36 O
ATOM 20 N1 G A 185 109.444 65.265 -27.188 1.00 68.80 N
ATOM 21 C2 G A 185 108.535 65.506 -26.188 1.00 67.34 C
ATOM 22 N2 G A 185 108.761 64.907 -25.016 1.00 66.49 N
ATOM 23 N3 G A 185 107.480 66.276 -26.328 1.00 67.53 N
ATOM 24 C4 G A 185 107.396 66.791 -27.570 1.00 69.69 C
ATOM 25 P G A 186 102.006 68.681 -24.398 1.00 73.00 P
ATOM 26 OP1 G A 186 102.282 68.072 -23.057 1.00 73.40 O
ATOM 27 OP2 G A 186 100.940 68.118 -25.266 1.00 72.53 O
ATOM 28 O5' G A 186 101.768 70.241 -24.204 1.00 73.44 O
TER
ATOM 1 O3' A B 252 110.169 60.360 -19.827 1.00 67.54 O
ATOM 2 P A B 253 110.716 60.216 -21.326 1.00 69.40 P
ATOM 3 OP1 A B 253 109.563 59.983 -22.252 1.00 69.78 O
ATOM 4 OP2 A B 253 111.850 59.267 -21.302 1.00 69.63 O
ATOM 5 O5' A B 253 111.264 61.651 -21.638 1.00 68.13 O
ATOM 6 C5' A B 253 110.370 62.770 -21.717 1.00 65.95 C
ATOM 7 C4' A B 253 111.156 64.042 -21.882 1.00 63.81 C
ATOM 8 O4' A B 253 111.788 64.407 -20.631 1.00 63.43 O
ATOM 9 C3' A B 253 112.283 63.959 -22.892 1.00 62.07 C
ATOM 10 O3' A B 253 111.762 64.207 -24.187 1.00 62.23 O
ATOM 11 C2' A B 253 113.235 65.044 -22.408 1.00 61.04 C
ATOM 12 O2' A B 253 112.811 66.315 -22.831 1.00 62.00 O
ATOM 13 C1' A B 253 113.053 64.979 -20.889 1.00 61.31 C
ATOM 14 N9 A B 253 114.067 64.162 -20.224 1.00 60.79 N
ATOM 15 C8 A B 253 114.140 62.795 -20.188 1.00 61.57 C
ATOM 16 N7 A B 253 115.205 62.339 -19.578 1.00 60.03 N
ATOM 17 C5 A B 253 115.867 63.483 -19.173 1.00 57.53 C
ATOM 18 C6 A B 253 117.067 63.673 -18.509 1.00 56.45 C
ATOM 19 N6 A B 253 117.863 62.679 -18.132 1.00 55.79 N
ATOM 20 N1 A B 253 117.444 64.936 -18.245 1.00 57.02 N
ATOM 21 C2 A B 253 116.663 65.934 -18.644 1.00 57.16 C
ATOM 22 N3 A B 253 115.515 65.884 -19.297 1.00 60.18 N
ATOM 23 C4 A B 253 115.167 64.611 -19.538 1.00 59.14 C
ATOM 24 P U B 254 112.596 63.770 -25.487 1.00 64.11 P
ATOM 25 OP1 U B 254 111.631 63.563 -26.607 1.00 62.50 O
ATOM 26 OP2 U B 254 113.512 62.681 -25.083 1.00 64.57 O
ATOM 27 O5' U B 254 113.458 65.068 -25.847 1.00 64.84 O
TER
Atoms:
OP1: (104.120,69.557,-31.426)
OP2: (102.598,71.610,-31.099)
C3': (103.731,69.442,-26.228)
C1': (105.189,67.948,-27.279)
C5': (102.639,69.935,-28.533)
O6: (110.246,65.500,-29.308)
O4': (104.076,68.048,-28.134)
C8: (106.699,67.895,-29.338)
C2: (108.535,65.506,-26.188)
C6: (109.379,65.790,-28.475)
C5: (108.250,66.619,-28.636)
C4: (107.396,66.791,-27.570)
P: (103.801,70.842,-30.724)
C4': (103.090,68.914,-27.515)
C2': (105.223,69.239,-26.481)
O2': (105.978,69.015,-25.309)
N1: (109.444,65.265,-27.188)
N2: (108.761,64.907,-25.016)
N3: (107.480,66.276,-26.328)
N7: (107.805,67.329,-29.743)
N9: (106.381,67.583,-28.037)
O5': (103.775,70.571,-29.149)
O3': (103.408,68.559,-25.167)
OP2: (102.598,71.610,-31.099)
C3': (103.731,69.442,-26.228)
C1': (105.189,67.948,-27.279)
C5': (102.639,69.935,-28.533)
O6: (110.246,65.500,-29.308)
O4': (104.076,68.048,-28.134)
C8: (106.699,67.895,-29.338)
C2: (108.535,65.506,-26.188)
C6: (109.379,65.790,-28.475)
C5: (108.250,66.619,-28.636)
C4: (107.396,66.791,-27.570)
P: (103.801,70.842,-30.724)
C4': (103.090,68.914,-27.515)
C2': (105.223,69.239,-26.481)
O2': (105.978,69.015,-25.309)
N1: (109.444,65.265,-27.188)
N2: (108.761,64.907,-25.016)
N3: (107.480,66.276,-26.328)
N7: (107.805,67.329,-29.743)
N9: (106.381,67.583,-28.037)
O5': (103.775,70.571,-29.149)
O3': (103.408,68.559,-25.167)
OP1: (109.563,59.983,-22.252)
OP2: (111.850,59.267,-21.302)
C3': (112.283,63.959,-22.892)
C1': (113.053,64.979,-20.889)
C5': (110.370,62.770,-21.717)
O4': (111.788,64.407,-20.631)
C8: (114.140,62.795,-20.188)
O2': (112.811,66.315,-22.831)
C6: (117.067,63.673,-18.509)
C5: (115.867,63.483,-19.173)
C4: (115.167,64.611,-19.538)
P: (110.716,60.216,-21.326)
C4': (111.156,64.042,-21.882)
C2': (113.235,65.044,-22.408)
C2: (116.663,65.934,-18.644)
N1: (117.444,64.936,-18.245)
N3: (115.515,65.884,-19.297)
N6: (117.863,62.679,-18.132)
N7: (115.205,62.339,-19.578)
N9: (114.067,64.162,-20.224)
O5': (111.264,61.651,-21.638)
O3': (111.762,64.207,-24.187)
OP2: (111.850,59.267,-21.302)
C3': (112.283,63.959,-22.892)
C1': (113.053,64.979,-20.889)
C5': (110.370,62.770,-21.717)
O4': (111.788,64.407,-20.631)
C8: (114.140,62.795,-20.188)
O2': (112.811,66.315,-22.831)
C6: (117.067,63.673,-18.509)
C5: (115.867,63.483,-19.173)
C4: (115.167,64.611,-19.538)
P: (110.716,60.216,-21.326)
C4': (111.156,64.042,-21.882)
C2': (113.235,65.044,-22.408)
C2: (116.663,65.934,-18.644)
N1: (117.444,64.936,-18.245)
N3: (115.515,65.884,-19.297)
N6: (117.863,62.679,-18.132)
N7: (115.205,62.339,-19.578)
N9: (114.067,64.162,-20.224)
O5': (111.264,61.651,-21.638)
O3': (111.762,64.207,-24.187)
Image (generated by PyMOL):