Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3DS7:A47:A20
Extra
PDB:
ATOM 1 O3' C A 46 -11.668 5.373 -48.175 1.00 21.41 O
ATOM 2 P G A 47 -11.352 5.388 -49.724 1.00 23.10 P
ATOM 3 OP1 G A 47 -11.818 4.109 -50.269 1.00 25.46 O
ATOM 4 OP2 G A 47 -9.974 5.941 -50.062 1.00 23.16 O
ATOM 5 O5' G A 47 -12.355 6.500 -50.253 1.00 24.80 O
ATOM 6 C5' G A 47 -12.555 6.696 -51.651 1.00 28.71 C
ATOM 7 C4' G A 47 -13.054 8.082 -51.862 1.00 32.86 C
ATOM 8 O4' G A 47 -11.918 8.964 -51.718 1.00 32.66 O
ATOM 9 C3' G A 47 -13.567 8.282 -53.288 1.00 33.68 C
ATOM 10 O3' G A 47 -14.754 9.044 -53.178 1.00 34.96 O
ATOM 11 C2' G A 47 -12.423 8.944 -54.032 1.00 34.11 C
ATOM 12 O2' G A 47 -12.828 9.934 -54.903 1.00 37.98 O
ATOM 13 C1' G A 47 -11.719 9.673 -52.904 1.00 33.47 C
ATOM 14 N9 G A 47 -10.322 10.077 -53.002 1.00 32.96 N
ATOM 15 C8 G A 47 -9.288 9.329 -53.472 1.00 32.50 C
ATOM 16 N7 G A 47 -8.140 9.937 -53.379 1.00 32.39 N
ATOM 17 C5 G A 47 -8.436 11.180 -52.837 1.00 31.68 C
ATOM 18 C6 G A 47 -7.569 12.269 -52.495 1.00 31.45 C
ATOM 19 O6 G A 47 -6.327 12.330 -52.596 1.00 30.28 O
ATOM 20 N1 G A 47 -8.288 13.357 -51.969 1.00 30.06 N
ATOM 21 C2 G A 47 -9.653 13.375 -51.784 1.00 30.62 C
ATOM 22 N2 G A 47 -10.175 14.518 -51.320 1.00 30.83 N
ATOM 23 N3 G A 47 -10.460 12.345 -52.054 1.00 31.17 N
ATOM 24 C4 G A 47 -9.780 11.290 -52.591 1.00 32.08 C
ATOM 25 P U A 48 -16.001 8.797 -54.147 1.00 35.19 P
ATOM 26 OP1 U A 48 -16.094 7.330 -54.370 1.00 37.04 O
ATOM 27 OP2 U A 48 -15.896 9.688 -55.253 1.00 37.46 O
ATOM 28 O5' U A 48 -17.252 9.226 -53.246 1.00 35.91 O
TER
ATOM 1 O3' U B 19 -15.443 16.343 -46.187 1.00 18.70 O
ATOM 2 P A B 20 -14.713 17.324 -47.276 1.00 17.79 P
ATOM 3 OP1 A B 20 -15.158 18.693 -46.856 1.00 17.21 O
ATOM 4 OP2 A B 20 -14.995 16.919 -48.669 1.00 15.07 O
ATOM 5 O5' A B 20 -13.182 17.152 -47.036 1.00 16.62 O
ATOM 6 C5' A B 20 -12.522 17.676 -45.836 1.00 16.41 C
ATOM 7 C4' A B 20 -11.028 17.387 -45.930 1.00 20.24 C
ATOM 8 O4' A B 20 -10.800 15.943 -45.844 1.00 19.00 O
ATOM 9 C3' A B 20 -10.535 17.792 -47.314 1.00 20.40 C
ATOM 10 O3' A B 20 -9.263 18.357 -47.155 1.00 21.58 O
ATOM 11 C2' A B 20 -10.522 16.519 -48.151 1.00 20.44 C
ATOM 12 O2' A B 20 -9.487 16.469 -49.120 1.00 23.77 O
ATOM 13 C1' A B 20 -10.297 15.449 -47.082 1.00 20.49 C
ATOM 14 N9 A B 20 -10.949 14.172 -47.389 1.00 20.40 N
ATOM 15 C8 A B 20 -12.274 13.765 -47.153 1.00 20.09 C
ATOM 16 N7 A B 20 -12.538 12.542 -47.572 1.00 19.49 N
ATOM 17 C5 A B 20 -11.309 12.116 -48.105 1.00 19.21 C
ATOM 18 C6 A B 20 -10.896 10.925 -48.721 1.00 19.80 C
ATOM 19 N6 A B 20 -11.710 9.869 -48.885 1.00 19.75 N
ATOM 20 N1 A B 20 -9.599 10.851 -49.167 1.00 19.56 N
ATOM 21 C2 A B 20 -8.800 11.884 -48.987 1.00 18.73 C
ATOM 22 N3 A B 20 -9.058 13.062 -48.419 1.00 18.34 N
ATOM 23 C4 A B 20 -10.337 13.124 -48.007 1.00 21.13 C
ATOM 24 P U B 21 -9.094 19.956 -47.036 1.00 21.76 P
ATOM 25 OP1 U B 21 -9.735 20.496 -48.236 1.00 20.54 O
ATOM 26 OP2 U B 21 -7.602 20.042 -46.851 1.00 22.57 O
ATOM 27 O5' U B 21 -9.913 20.361 -45.747 1.00 20.73 O
TER
ATOM 2 P G A 47 -11.352 5.388 -49.724 1.00 23.10 P
ATOM 3 OP1 G A 47 -11.818 4.109 -50.269 1.00 25.46 O
ATOM 4 OP2 G A 47 -9.974 5.941 -50.062 1.00 23.16 O
ATOM 5 O5' G A 47 -12.355 6.500 -50.253 1.00 24.80 O
ATOM 6 C5' G A 47 -12.555 6.696 -51.651 1.00 28.71 C
ATOM 7 C4' G A 47 -13.054 8.082 -51.862 1.00 32.86 C
ATOM 8 O4' G A 47 -11.918 8.964 -51.718 1.00 32.66 O
ATOM 9 C3' G A 47 -13.567 8.282 -53.288 1.00 33.68 C
ATOM 10 O3' G A 47 -14.754 9.044 -53.178 1.00 34.96 O
ATOM 11 C2' G A 47 -12.423 8.944 -54.032 1.00 34.11 C
ATOM 12 O2' G A 47 -12.828 9.934 -54.903 1.00 37.98 O
ATOM 13 C1' G A 47 -11.719 9.673 -52.904 1.00 33.47 C
ATOM 14 N9 G A 47 -10.322 10.077 -53.002 1.00 32.96 N
ATOM 15 C8 G A 47 -9.288 9.329 -53.472 1.00 32.50 C
ATOM 16 N7 G A 47 -8.140 9.937 -53.379 1.00 32.39 N
ATOM 17 C5 G A 47 -8.436 11.180 -52.837 1.00 31.68 C
ATOM 18 C6 G A 47 -7.569 12.269 -52.495 1.00 31.45 C
ATOM 19 O6 G A 47 -6.327 12.330 -52.596 1.00 30.28 O
ATOM 20 N1 G A 47 -8.288 13.357 -51.969 1.00 30.06 N
ATOM 21 C2 G A 47 -9.653 13.375 -51.784 1.00 30.62 C
ATOM 22 N2 G A 47 -10.175 14.518 -51.320 1.00 30.83 N
ATOM 23 N3 G A 47 -10.460 12.345 -52.054 1.00 31.17 N
ATOM 24 C4 G A 47 -9.780 11.290 -52.591 1.00 32.08 C
ATOM 25 P U A 48 -16.001 8.797 -54.147 1.00 35.19 P
ATOM 26 OP1 U A 48 -16.094 7.330 -54.370 1.00 37.04 O
ATOM 27 OP2 U A 48 -15.896 9.688 -55.253 1.00 37.46 O
ATOM 28 O5' U A 48 -17.252 9.226 -53.246 1.00 35.91 O
TER
ATOM 1 O3' U B 19 -15.443 16.343 -46.187 1.00 18.70 O
ATOM 2 P A B 20 -14.713 17.324 -47.276 1.00 17.79 P
ATOM 3 OP1 A B 20 -15.158 18.693 -46.856 1.00 17.21 O
ATOM 4 OP2 A B 20 -14.995 16.919 -48.669 1.00 15.07 O
ATOM 5 O5' A B 20 -13.182 17.152 -47.036 1.00 16.62 O
ATOM 6 C5' A B 20 -12.522 17.676 -45.836 1.00 16.41 C
ATOM 7 C4' A B 20 -11.028 17.387 -45.930 1.00 20.24 C
ATOM 8 O4' A B 20 -10.800 15.943 -45.844 1.00 19.00 O
ATOM 9 C3' A B 20 -10.535 17.792 -47.314 1.00 20.40 C
ATOM 10 O3' A B 20 -9.263 18.357 -47.155 1.00 21.58 O
ATOM 11 C2' A B 20 -10.522 16.519 -48.151 1.00 20.44 C
ATOM 12 O2' A B 20 -9.487 16.469 -49.120 1.00 23.77 O
ATOM 13 C1' A B 20 -10.297 15.449 -47.082 1.00 20.49 C
ATOM 14 N9 A B 20 -10.949 14.172 -47.389 1.00 20.40 N
ATOM 15 C8 A B 20 -12.274 13.765 -47.153 1.00 20.09 C
ATOM 16 N7 A B 20 -12.538 12.542 -47.572 1.00 19.49 N
ATOM 17 C5 A B 20 -11.309 12.116 -48.105 1.00 19.21 C
ATOM 18 C6 A B 20 -10.896 10.925 -48.721 1.00 19.80 C
ATOM 19 N6 A B 20 -11.710 9.869 -48.885 1.00 19.75 N
ATOM 20 N1 A B 20 -9.599 10.851 -49.167 1.00 19.56 N
ATOM 21 C2 A B 20 -8.800 11.884 -48.987 1.00 18.73 C
ATOM 22 N3 A B 20 -9.058 13.062 -48.419 1.00 18.34 N
ATOM 23 C4 A B 20 -10.337 13.124 -48.007 1.00 21.13 C
ATOM 24 P U B 21 -9.094 19.956 -47.036 1.00 21.76 P
ATOM 25 OP1 U B 21 -9.735 20.496 -48.236 1.00 20.54 O
ATOM 26 OP2 U B 21 -7.602 20.042 -46.851 1.00 22.57 O
ATOM 27 O5' U B 21 -9.913 20.361 -45.747 1.00 20.73 O
TER
Atoms:
OP1: (-11.818,4.109,-50.269)
OP2: (-9.974,5.941,-50.062)
C3': (-13.567,8.282,-53.288)
C1': (-11.719,9.673,-52.904)
C5': (-12.555,6.696,-51.651)
O6: (-6.327,12.330,-52.596)
O4': (-11.918,8.964,-51.718)
C8: (-9.288,9.329,-53.472)
C2: (-9.653,13.375,-51.784)
C6: (-7.569,12.269,-52.495)
C5: (-8.436,11.180,-52.837)
C4: (-9.780,11.290,-52.591)
P: (-11.352,5.388,-49.724)
C4': (-13.054,8.082,-51.862)
C2': (-12.423,8.944,-54.032)
O2': (-12.828,9.934,-54.903)
N1: (-8.288,13.357,-51.969)
N2: (-10.175,14.518,-51.320)
N3: (-10.460,12.345,-52.054)
N7: (-8.140,9.937,-53.379)
N9: (-10.322,10.077,-53.002)
O5': (-12.355,6.500,-50.253)
O3': (-14.754,9.044,-53.178)
OP2: (-9.974,5.941,-50.062)
C3': (-13.567,8.282,-53.288)
C1': (-11.719,9.673,-52.904)
C5': (-12.555,6.696,-51.651)
O6: (-6.327,12.330,-52.596)
O4': (-11.918,8.964,-51.718)
C8: (-9.288,9.329,-53.472)
C2: (-9.653,13.375,-51.784)
C6: (-7.569,12.269,-52.495)
C5: (-8.436,11.180,-52.837)
C4: (-9.780,11.290,-52.591)
P: (-11.352,5.388,-49.724)
C4': (-13.054,8.082,-51.862)
C2': (-12.423,8.944,-54.032)
O2': (-12.828,9.934,-54.903)
N1: (-8.288,13.357,-51.969)
N2: (-10.175,14.518,-51.320)
N3: (-10.460,12.345,-52.054)
N7: (-8.140,9.937,-53.379)
N9: (-10.322,10.077,-53.002)
O5': (-12.355,6.500,-50.253)
O3': (-14.754,9.044,-53.178)
OP1: (-15.158,18.693,-46.856)
OP2: (-14.995,16.919,-48.669)
C3': (-10.535,17.792,-47.314)
C1': (-10.297,15.449,-47.082)
C5': (-12.522,17.676,-45.836)
O4': (-10.800,15.943,-45.844)
C8: (-12.274,13.765,-47.153)
O2': (-9.487,16.469,-49.120)
C6: (-10.896,10.925,-48.721)
C5: (-11.309,12.116,-48.105)
C4: (-10.337,13.124,-48.007)
P: (-14.713,17.324,-47.276)
C4': (-11.028,17.387,-45.930)
C2': (-10.522,16.519,-48.151)
C2: (-8.800,11.884,-48.987)
N1: (-9.599,10.851,-49.167)
N3: (-9.058,13.062,-48.419)
N6: (-11.710,9.869,-48.885)
N7: (-12.538,12.542,-47.572)
N9: (-10.949,14.172,-47.389)
O5': (-13.182,17.152,-47.036)
O3': (-9.263,18.357,-47.155)
OP2: (-14.995,16.919,-48.669)
C3': (-10.535,17.792,-47.314)
C1': (-10.297,15.449,-47.082)
C5': (-12.522,17.676,-45.836)
O4': (-10.800,15.943,-45.844)
C8: (-12.274,13.765,-47.153)
O2': (-9.487,16.469,-49.120)
C6: (-10.896,10.925,-48.721)
C5: (-11.309,12.116,-48.105)
C4: (-10.337,13.124,-48.007)
P: (-14.713,17.324,-47.276)
C4': (-11.028,17.387,-45.930)
C2': (-10.522,16.519,-48.151)
C2: (-8.800,11.884,-48.987)
N1: (-9.599,10.851,-49.167)
N3: (-9.058,13.062,-48.419)
N6: (-11.710,9.869,-48.885)
N7: (-12.538,12.542,-47.572)
N9: (-10.949,14.172,-47.389)
O5': (-13.182,17.152,-47.036)
O3': (-9.263,18.357,-47.155)
Image (generated by PyMOL):