ClaRNA

Doublet info:

Details

Nucleotide types: GA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3F1E:A185:A253

Extra

PDB:
ATOM 1 O3' U A 184 33.095 58.800 97.478 1.00 80.95 O
ATOM 2 P G A 185 34.196 57.833 98.144 1.00 82.58 P
ATOM 3 OP1 G A 185 34.388 58.321 99.530 1.00 62.79 O
ATOM 4 OP2 G A 185 35.357 57.740 97.219 1.00 80.43 O
ATOM 5 O5' G A 185 33.501 56.386 98.220 1.00 69.60 O
ATOM 6 C5' G A 185 34.272 55.227 98.563 1.00 64.65 C
ATOM 7 C4' G A 185 33.499 54.207 99.388 1.00 67.62 C
ATOM 8 O4' G A 185 33.123 54.780 100.663 1.00 65.98 O
ATOM 9 C3' G A 185 32.179 53.718 98.803 1.00 80.79 C
ATOM 10 O3' G A 185 31.770 52.498 99.401 1.00 85.87 O
ATOM 11 C2' G A 185 31.226 54.787 99.295 1.00 72.38 C
ATOM 12 O2' G A 185 29.890 54.328 99.247 1.00 81.33 O
ATOM 13 C1' G A 185 31.713 54.853 100.736 1.00 68.50 C
ATOM 14 N9 G A 185 31.337 56.063 101.468 1.00 83.92 N
ATOM 15 C8 G A 185 31.877 57.324 101.358 1.00 76.42 C
ATOM 16 N7 G A 185 31.328 58.196 102.162 1.00 74.43 N
ATOM 17 C5 G A 185 30.364 57.471 102.852 1.00 79.69 C
ATOM 18 C6 G A 185 29.450 57.875 103.856 1.00 72.87 C
ATOM 19 O6 G A 185 29.300 58.997 104.355 1.00 78.41 O
ATOM 20 N1 G A 185 28.650 56.823 104.286 1.00 65.97 N
ATOM 21 C2 G A 185 28.720 55.541 103.802 1.00 79.81 C
ATOM 22 N2 G A 185 27.865 54.654 104.334 1.00 85.25 N
ATOM 23 N3 G A 185 29.571 55.146 102.863 1.00 85.22 N
ATOM 24 C4 G A 185 30.360 56.160 102.436 1.00 84.29 C
ATOM 25 P G A 186 32.548 51.135 99.142 1.00 93.75 P
ATOM 26 OP1 G A 186 31.731 50.060 99.743 1.00 86.08 O
ATOM 27 OP2 G A 186 33.962 51.333 99.550 1.00 95.84 O
ATOM 28 O5' G A 186 32.511 50.955 97.554 1.00 86.40 O
TER

ATOM 1 O3' A B 252 24.621 50.635 108.944 1.00 56.06 O
ATOM 2 P A B 253 25.082 52.013 109.630 1.00 54.74 P
ATOM 3 OP1 A B 253 26.545 51.962 109.838 1.00 60.15 O
ATOM 4 OP2 A B 253 24.211 52.280 110.798 1.00 46.51 O
ATOM 5 O5' A B 253 24.765 53.044 108.452 1.00 54.56 O
ATOM 6 C5' A B 253 25.402 52.839 107.206 1.00 50.38 C
ATOM 7 C4' A B 253 24.658 53.484 106.051 1.00 62.77 C
ATOM 8 O4' A B 253 23.426 52.764 105.791 1.00 61.69 O
ATOM 9 C3' A B 253 24.247 54.936 106.261 1.00 62.43 C
ATOM 10 O3' A B 253 25.319 55.786 105.877 1.00 64.43 O
ATOM 11 C2' A B 253 23.033 55.068 105.336 1.00 52.62 C
ATOM 12 O2' A B 253 23.354 55.387 103.990 1.00 45.06 O
ATOM 13 C1' A B 253 22.406 53.677 105.430 1.00 54.04 C
ATOM 14 N9 A B 253 21.369 53.607 106.447 1.00 55.14 N
ATOM 15 C8 A B 253 21.545 53.461 107.792 1.00 55.18 C
ATOM 16 N7 A B 253 20.423 53.438 108.466 1.00 52.49 N
ATOM 17 C5 A B 253 19.448 53.579 107.492 1.00 51.59 C
ATOM 18 C6 A B 253 18.041 53.632 107.553 1.00 54.34 C
ATOM 19 N6 A B 253 17.341 53.539 108.693 1.00 56.44 N
ATOM 20 N1 A B 253 17.372 53.777 106.386 1.00 58.85 N
ATOM 21 C2 A B 253 18.065 53.871 105.242 1.00 57.40 C
ATOM 22 N3 A B 253 19.384 53.834 105.065 1.00 48.28 N
ATOM 23 C4 A B 253 20.017 53.684 106.240 1.00 52.99 C
ATOM 24 P U B 254 25.528 57.212 106.556 1.00 70.98 P
ATOM 25 OP1 U B 254 26.981 57.517 106.511 1.00 70.04 O
ATOM 26 OP2 U B 254 24.808 57.249 107.845 1.00 67.37 O
ATOM 27 O5' U B 254 24.742 58.148 105.531 1.00 50.69 O
TER

Atoms:
OP1: (34.388,58.321,99.530)
OP2: (35.357,57.740,97.219)
C3': (32.179,53.718,98.803)
C1': (31.713,54.853,100.736)
C5': (34.272,55.227,98.563)
O6: (29.300,58.997,104.355)
O4': (33.123,54.780,100.663)
C8: (31.877,57.324,101.358)
C2: (28.720,55.541,103.802)
C6: (29.450,57.875,103.856)
C5: (30.364,57.471,102.852)
C4: (30.360,56.160,102.436)
P: (34.196,57.833,98.144)
C4': (33.499,54.207,99.388)
C2': (31.226,54.787,99.295)
O2': (29.890,54.328,99.247)
N1: (28.650,56.823,104.286)
N2: (27.865,54.654,104.334)
N3: (29.571,55.146,102.863)
N7: (31.328,58.196,102.162)
N9: (31.337,56.063,101.468)
O5': (33.501,56.386,98.220)
O3': (31.770,52.498,99.401)
OP1: (26.545,51.962,109.838)
OP2: (24.211,52.280,110.798)
C3': (24.247,54.936,106.261)
C1': (22.406,53.677,105.430)
C5': (25.402,52.839,107.206)
O4': (23.426,52.764,105.791)
C8: (21.545,53.461,107.792)
O2': (23.354,55.387,103.990)
C6: (18.041,53.632,107.553)
C5: (19.448,53.579,107.492)
C4: (20.017,53.684,106.240)
P: (25.082,52.013,109.630)
C4': (24.658,53.484,106.051)
C2': (23.033,55.068,105.336)
C2: (18.065,53.871,105.242)
N1: (17.372,53.777,106.386)
N3: (19.384,53.834,105.065)
N6: (17.341,53.539,108.693)
N7: (20.423,53.438,108.466)
N9: (21.369,53.607,106.447)
O5': (24.765,53.044,108.452)
O3': (25.319,55.786,105.877)
Image (generated by PyMOL):
PyMOL image
show in jmol