ClaRNA

Doublet info:

Details

Nucleotide types: GA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3FO6:A47:A20

Extra

PDB:
ATOM 1 O3' C A 46 47.244 13.712 6.090 1.00 28.43 O
ATOM 2 P G A 47 48.816 13.399 6.070 1.00 32.21 P
ATOM 3 OP1 G A 47 49.356 13.914 4.789 1.00 31.58 O
ATOM 4 OP2 G A 47 49.003 11.968 6.427 1.00 30.89 O
ATOM 5 O5' G A 47 49.413 14.289 7.247 1.00 34.48 O
ATOM 6 C5' G A 47 50.791 14.202 7.604 1.00 38.24 C
ATOM 7 C4' G A 47 51.044 14.976 8.875 1.00 41.29 C
ATOM 8 O4' G A 47 50.802 14.101 10.010 1.00 41.99 O
ATOM 9 C3' G A 47 52.478 15.459 9.049 1.00 42.56 C
ATOM 10 O3' G A 47 52.482 16.586 9.915 1.00 44.86 O
ATOM 11 C2' G A 47 53.151 14.269 9.725 1.00 42.53 C
ATOM 12 O2' G A 47 54.255 14.648 10.518 1.00 43.04 O
ATOM 13 C1' G A 47 52.029 13.769 10.631 1.00 41.43 C
ATOM 14 N9 G A 47 52.038 12.341 10.936 1.00 39.77 N
ATOM 15 C8 G A 47 52.479 11.309 10.140 1.00 39.44 C
ATOM 16 N7 G A 47 52.354 10.136 10.706 1.00 38.62 N
ATOM 17 C5 G A 47 51.797 10.412 11.949 1.00 39.04 C
ATOM 18 C6 G A 47 51.431 9.541 13.011 1.00 38.63 C
ATOM 19 O6 G A 47 51.521 8.307 13.066 1.00 38.96 O
ATOM 20 N1 G A 47 50.910 10.246 14.092 1.00 38.25 N
ATOM 21 C2 G A 47 50.760 11.611 14.148 1.00 38.05 C
ATOM 22 N2 G A 47 50.249 12.112 15.286 1.00 36.73 N
ATOM 23 N3 G A 47 51.089 12.428 13.165 1.00 37.24 N
ATOM 24 C4 G A 47 51.598 11.767 12.106 1.00 38.87 C
ATOM 25 P U A 48 53.357 17.881 9.545 1.00 39.90 P
ATOM 26 OP1 U A 48 53.516 17.935 8.068 1.00 40.83 O
ATOM 27 OP2 U A 48 54.558 17.892 10.415 1.00 40.94 O
ATOM 28 O5' U A 48 52.423 19.094 9.974 1.00 40.05 O
TER

ATOM 1 O3' U B 19 45.146 17.343 17.010 1.00 24.67 O
ATOM 2 P A B 20 46.271 16.739 17.977 1.00 25.51 P
ATOM 3 OP1 A B 20 45.904 17.151 19.364 1.00 24.57 O
ATOM 4 OP2 A B 20 47.613 17.077 17.453 1.00 21.87 O
ATOM 5 O5' A B 20 46.066 15.166 17.821 1.00 23.83 O
ATOM 6 C5' A B 20 44.768 14.589 17.882 1.00 22.28 C
ATOM 7 C4' A B 20 44.870 13.080 17.873 1.00 24.25 C
ATOM 8 O4' A B 20 44.804 12.601 16.501 1.00 24.34 O
ATOM 9 C3' A B 20 46.171 12.519 18.419 1.00 22.82 C
ATOM 10 O3' A B 20 45.963 11.249 19.011 1.00 22.87 O
ATOM 11 C2' A B 20 47.079 12.475 17.191 1.00 25.01 C
ATOM 12 O2' A B 20 48.044 11.444 17.249 1.00 26.35 O
ATOM 13 C1' A B 20 46.085 12.166 16.072 1.00 23.88 C
ATOM 14 N9 A B 20 46.413 12.843 14.811 1.00 24.66 N
ATOM 15 C8 A B 20 46.193 14.158 14.469 1.00 25.75 C
ATOM 16 N7 A B 20 46.589 14.464 13.255 1.00 24.18 N
ATOM 17 C5 A B 20 47.113 13.276 12.766 1.00 25.19 C
ATOM 18 C6 A B 20 47.701 12.934 11.530 1.00 24.79 C
ATOM 19 N6 A B 20 47.860 13.796 10.521 1.00 25.57 N
ATOM 20 N1 A B 20 48.121 11.661 11.365 1.00 24.88 N
ATOM 21 C2 A B 20 47.953 10.795 12.374 1.00 24.75 C
ATOM 22 N3 A B 20 47.411 10.994 13.578 1.00 23.64 N
ATOM 23 C4 A B 20 47.011 12.269 13.713 1.00 25.21 C
ATOM 24 P U B 21 46.003 11.110 20.612 1.00 23.24 P
ATOM 25 OP1 U B 21 47.258 11.739 21.061 1.00 21.05 O
ATOM 26 OP2 U B 21 45.729 9.680 20.957 1.00 23.14 O
ATOM 27 O5' U B 21 44.780 11.994 21.119 1.00 20.45 O
TER

Atoms:
OP1: (49.356,13.914,4.789)
OP2: (49.003,11.968,6.427)
C3': (52.478,15.459,9.049)
C1': (52.029,13.769,10.631)
C5': (50.791,14.202,7.604)
O6: (51.521,8.307,13.066)
O4': (50.802,14.101,10.010)
C8: (52.479,11.309,10.140)
C2: (50.760,11.611,14.148)
C6: (51.431,9.541,13.011)
C5: (51.797,10.412,11.949)
C4: (51.598,11.767,12.106)
P: (48.816,13.399,6.070)
C4': (51.044,14.976,8.875)
C2': (53.151,14.269,9.725)
O2': (54.255,14.648,10.518)
N1: (50.910,10.246,14.092)
N2: (50.249,12.112,15.286)
N3: (51.089,12.428,13.165)
N7: (52.354,10.136,10.706)
N9: (52.038,12.341,10.936)
O5': (49.413,14.289,7.247)
O3': (52.482,16.586,9.915)
OP1: (45.904,17.151,19.364)
OP2: (47.613,17.077,17.453)
C3': (46.171,12.519,18.419)
C1': (46.085,12.166,16.072)
C5': (44.768,14.589,17.882)
O4': (44.804,12.601,16.501)
C8: (46.193,14.158,14.469)
O2': (48.044,11.444,17.249)
C6: (47.701,12.934,11.530)
C5: (47.113,13.276,12.766)
C4: (47.011,12.269,13.713)
P: (46.271,16.739,17.977)
C4': (44.870,13.080,17.873)
C2': (47.079,12.475,17.191)
C2: (47.953,10.795,12.374)
N1: (48.121,11.661,11.365)
N3: (47.411,10.994,13.578)
N6: (47.860,13.796,10.521)
N7: (46.589,14.464,13.255)
N9: (46.413,12.843,14.811)
O5': (46.066,15.166,17.821)
O3': (45.963,11.249,19.011)
Image (generated by PyMOL):
PyMOL image
show in jmol